Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.3e-57 225.3 112 100.0
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.1e-41 171.0 94 84.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 3.3e-40 168.3 102 77.5
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 3.3e-40 168.3 94 84.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 3.7e-39 164.9 113 72.6
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.1e-38 163.3 103 76.7
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.4e-38 162.2 100 77.0
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 3.1e-38 161.8 102 76.5
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 4.1e-38 161.4 101 74.3
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.1e-38 161.4 111 69.4
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 4.1e-38 161.4 111 69.4
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.9e-38 160.6 101 71.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 9.1e-38 160.2 99 72.7
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 9.1e-38 160.2 96 76.0
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.2e-37 159.8 101 77.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.5e-37 159.5 99 75.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.5e-37 159.5 99 72.7
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.5e-37 159.5 101 76.2
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.5e-37 159.5 112 69.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.0e-37 159.1 94 75.5
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 2.0e-37 159.1 101 72.3
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.6e-37 158.7 101 76.2
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 2.6e-37 158.7 94 75.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.6e-37 158.7 91 78.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 2.6e-37 158.7 90 80.0
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 2.6e-37 158.7 100 74.0
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.4e-37 158.3 106 68.9
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 3.4e-37 158.3 110 70.9
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 4.5e-37 157.9 106 70.8
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 4.5e-37 157.9 101 74.3
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.9e-37 157.5 105 72.4
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 7.7e-37 157.1 107 71.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 7.7e-37 157.1 96 77.1
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.0e-36 156.8 99 73.7
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.3e-36 156.4 109 67.9
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.3e-36 156.4 92 79.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.7e-36 156.0 103 72.8
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.9e-36 155.2 92 78.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.8e-36 154.8 107 68.2
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.8e-36 154.8 101 72.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 3.8e-36 154.8 101 75.2
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 5.0e-36 154.5 101 75.2
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 6.5e-36 154.1 113 67.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 8.5e-36 153.7 102 72.5
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 8.5e-36 153.7 92 77.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 8.5e-36 153.7 112 66.1
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.1e-35 153.3 101 70.3
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.9e-35 152.5 87 73.6
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.9e-35 152.5 87 73.6
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 1.9e-35 152.5 107 67.3
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.9e-35 152.5 94 77.7
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.5e-35 152.1 112 65.2
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 74.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 74.7
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 74.7
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 74.7
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 74.7
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.5e-35 152.1 92 71.7
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.5e-35 152.1 87 75.9
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 2.5e-35 152.1 107 69.2
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 3.2e-35 151.8 101 68.3
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 3.2e-35 151.8 87 74.7
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 3.2e-35 151.8 87 74.7
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 3.2e-35 151.8 87 74.7
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 4.2e-35 151.4 92 76.1
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 4.2e-35 151.4 94 74.5
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 5.5e-35 151.0 103 71.8
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 5.5e-35 151.0 109 63.3
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 5.5e-35 151.0 109 63.3
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 5.5e-35 151.0 112 67.0
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 9.4e-35 150.2 112 67.0
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.2e-34 149.8 108 70.4
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.7e-34 148.7 112 61.6
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 2.7e-34 148.7 112 67.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 4.7e-34 147.9 103 65.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 7.9e-34 147.1 90 73.3
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.9e-34 147.1 101 67.3
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 7.9e-34 147.1 107 68.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.0e-33 146.7 107 62.6
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 3.0e-33 145.2 103 69.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.9e-33 144.8 79 81.0
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 6.7e-33 144.1 95 71.6
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.5e-32 142.9 90 74.4
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.0e-32 142.5 76 82.9
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 3.3e-32 141.7 103 66.0
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 5.7e-32 141.0 92 68.5
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 9.7e-32 140.2 99 66.7
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 3.7e-31 138.3 102 63.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 4.8e-31 137.9 76 82.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 4.8e-31 137.9 92 70.7
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.1e-30 136.7 92 69.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.5e-29 132.9 77 79.2
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.5e-29 132.9 76 77.6
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 1.5e-29 132.9 105 61.0
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.0e-29 132.5 105 63.8
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 2.2e-28 129.0 78 76.9
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 4.2e-27 124.8 90 66.7
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 7.2e-27 124.0 76 73.7
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.6e-26 122.9 82 70.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.5e-24 116.3 98 55.1
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.4e-22 109.8 98 54.1
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.0e-21 105.9 103 48.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.9e-20 102.1 99 51.5
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.7e-18 95.5 56 78.6
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 2.7e-18 95.5 76 57.9
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.1e-14 83.6 110 41.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.5e-11 73.2 90 45.6


User provided reference genes

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