Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.2e-177 626.3 312 100.0
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.5e-122 443.4 313 67.4
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 4.1e-112 408.7 331 62.5
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 6.9e-112 407.9 316 62.7
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 6.9e-112 407.9 318 63.5
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 5.0e-110 401.7 320 61.9
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.9e-109 399.8 313 61.0
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 3.0e-107 392.5 305 61.0
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 6.7e-107 391.3 308 61.7
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 2.0e-106 389.8 312 60.3
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 1.3e-105 387.1 315 59.4
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 4.8e-105 385.2 315 59.4
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 8.2e-105 384.4 296 62.8
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 4.1e-104 382.1 308 59.4
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 7.0e-104 381.3 329 58.4
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.6e-103 380.2 327 56.6
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 1.6e-103 380.2 333 57.1
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 2.6e-103 379.4 308 59.4
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 3.5e-103 379.0 311 57.6
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 5.0e-102 375.2 305 57.4
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.9e-101 373.2 305 58.0
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.9e-101 373.2 314 59.2
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 3.2e-101 372.5 314 58.9
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 9.4e-101 370.9 307 58.0
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 9.4e-101 370.9 314 58.9
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 2.1e-100 369.8 309 55.3
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 4.7e-100 368.6 307 59.9
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 6.1e-100 368.2 305 58.4
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.4e-99 367.1 302 57.9
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.8e-99 366.7 304 59.2
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 3.0e-99 365.9 304 55.3
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 3.0e-99 365.9 323 54.8
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 4.0e-99 365.5 309 58.3
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 4.0e-99 365.5 306 58.5
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 8.8e-99 364.4 307 58.6
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 8.8e-99 364.4 307 58.6
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 1.2e-98 364.0 313 55.3
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.2e-98 364.0 313 55.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 2.6e-98 362.8 302 59.3
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 3.3e-98 362.5 305 57.4
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 3.3e-98 362.5 302 55.6
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 4.4e-98 362.1 309 57.3
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 2.8e-97 359.4 305 54.8
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 3.7e-97 359.0 313 55.9
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 3.7e-97 359.0 307 58.3
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 6.3e-97 358.2 301 58.8
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 6.3e-97 358.2 307 56.7
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.4e-96 357.1 308 57.5
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.8e-96 356.7 305 57.4
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 3.5e-95 352.4 320 55.6
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 4.5e-95 352.1 305 56.7
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 5.9e-95 351.7 304 58.6
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 7.7e-95 351.3 306 58.2
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 7.7e-95 351.3 304 58.6
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.0e-94 350.9 310 56.8
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 1.0e-94 350.9 309 57.3
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.7e-94 350.1 307 56.4
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 2.9e-94 349.4 304 58.2
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.9e-94 349.4 306 57.5
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.9e-94 349.4 306 57.5
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 6.5e-94 348.2 309 54.7
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 8.5e-94 347.8 303 54.5
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 8.5e-94 347.8 294 55.8
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 1.1e-93 347.4 310 54.8
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 3.2e-93 345.9 306 52.6
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.1e-92 343.2 305 54.4
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 2.1e-92 343.2 294 57.1
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 4.7e-92 342.0 305 54.4
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 4.7e-92 342.0 295 54.9
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 8.0e-92 341.3 309 54.4
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 3.4e-90 335.9 302 56.3
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 4.4e-90 335.5 289 54.0
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 1.8e-88 330.1 296 54.7
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 2.0e-87 326.6 302 55.6
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.9e-87 325.1 307 54.4
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 8.5e-86 321.2 318 51.9
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 8.5e-86 321.2 323 52.6
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 4.2e-85 318.9 300 53.3
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 3.0e-83 312.8 306 54.2
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 4.4e-82 308.9 279 59.9
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 4.4e-82 308.9 231 62.3
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 4.9e-81 305.4 301 53.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.1e-80 304.3 275 56.4
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 1.8e-80 303.5 268 59.0
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.7e-79 299.7 321 51.4
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 2.5e-77 293.1 260 61.5
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 3.3e-77 292.7 259 57.1
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 4.7e-76 288.9 287 56.8
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.7e-73 279.3 268 53.7
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 3.2e-72 276.2 224 59.8
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 5.9e-71 271.9 217 62.2
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 7.8e-71 271.6 254 56.3
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 1.9e-69 266.9 253 50.6
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 7.3e-69 265.0 221 57.0
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 2.1e-68 263.5 309 46.3
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 4.7e-68 262.3 237 58.6
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 2.6e-66 256.5 262 52.3
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.9e-64 250.4 303 46.5
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.6e-63 247.3 309 41.4
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 1.1e-61 241.1 302 43.7
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 2.5e-61 240.0 175 60.0
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.6e-58 229.9 287 41.8
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 3.7e-57 226.1 295 45.4
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 7.1e-56 221.9 154 64.3
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-50 203.8 186 54.3
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 4.9e-49 199.1 225 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 1.9e-48 197.2 164 59.1
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.6e-44 183.0 157 56.7
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 4.0e-43 179.5 192 51.0
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.4e-40 171.0 115 60.9
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 4.2e-40 169.5 105 73.3
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 7.1e-40 168.7 339 32.4
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 2.1e-36 157.1 145 57.9
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 4.0e-35 152.9 252 41.3
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.8e-30 137.5 168 45.8
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.1e-27 128.3 156 43.6
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 2.4e-27 127.1 90 58.9
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.3e-25 121.3 75 64.0
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.9e-24 117.5 145 42.8
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 5.5e-24 115.9 164 43.3
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.6e-23 114.4 118 47.5
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 6.0e-23 112.5 157 40.1
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 5.1e-22 109.4 74 64.9
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.5e-21 107.8 74 63.5
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.1e-20 104.0 177 40.1
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 3.4e-18 96.7 173 36.4
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 9.3e-16 88.6 70 50.0
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 1.6e-15 87.8 141 39.0
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 3.3e-13 80.1 107 43.9
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 4.2e-08 63.2 37 73.0


User provided reference genes

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