Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 6.2e-82 307.4 151 100.0
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 6.4e-63 244.2 151 79.5
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.4e-62 243.0 151 78.8
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.8e-57 226.1 150 71.3
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.2e-56 223.4 150 70.0
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.2e-56 223.4 155 72.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 3.4e-56 221.9 148 70.9
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 3.4e-56 221.9 150 72.7
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 5.8e-56 221.1 150 70.0
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 7.6e-56 220.7 151 74.8
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.7e-55 219.5 151 71.5
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.7e-55 219.5 150 68.7
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.7e-55 219.5 151 71.5
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.7e-55 219.5 153 68.6
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 2.9e-55 218.8 151 68.9
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.9e-55 218.8 150 72.0
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 2.9e-55 218.8 148 73.6
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 3.8e-55 218.4 151 73.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 8.4e-55 217.2 147 68.7
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.1e-54 216.9 151 69.5
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 1.4e-54 216.5 148 68.2
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.9e-54 216.1 146 71.2
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.9e-54 216.1 148 70.3
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 2.4e-54 215.7 144 70.1
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 2.4e-54 215.7 151 70.9
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 2.4e-54 215.7 151 70.9
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 2.4e-54 215.7 151 70.9
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 2.4e-54 215.7 148 69.6
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 3.2e-54 215.3 151 68.9
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 3.2e-54 215.3 151 69.5
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 4.2e-54 214.9 151 69.5
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 4.2e-54 214.9 151 69.5
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 5.5e-54 214.5 148 70.3
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 5.5e-54 214.5 148 68.9
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 5.5e-54 214.5 146 71.9
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 5.5e-54 214.5 151 70.2
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 7.1e-54 214.2 149 69.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 9.3e-54 213.8 148 70.9
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 9.3e-54 213.8 151 68.2
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-53 213.4 153 67.3
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.6e-53 213.0 148 67.6
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.7e-53 212.2 151 68.9
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.7e-53 212.2 151 68.9
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 2.7e-53 212.2 153 66.0
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 7.9e-53 210.7 150 67.3
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 7.9e-53 210.7 148 69.6
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.0e-52 210.3 148 70.9
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 1.3e-52 209.9 150 66.0
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.8e-52 209.5 139 71.9
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.3e-52 209.1 151 70.2
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.3e-52 209.1 151 70.2
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.3e-52 209.1 179 61.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.7e-52 207.6 150 66.7
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 6.7e-52 207.6 150 66.7
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 6.7e-52 207.6 146 69.9
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 6.7e-52 207.6 146 69.9
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 6.7e-52 207.6 148 67.6
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 8.7e-52 207.2 146 69.2
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 8.7e-52 207.2 148 66.9
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.1e-51 206.8 151 68.2
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 1.1e-51 206.8 146 69.2
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.5e-51 206.5 151 66.9
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 2.5e-51 205.7 144 71.5
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 5.6e-51 204.5 140 69.3
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.4e-51 204.1 150 65.3
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 1.3e-50 203.4 114 78.9
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.6e-50 203.0 150 67.3
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.6e-50 203.0 149 66.4
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.6e-50 203.0 156 66.0
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 2.1e-50 202.6 148 70.3
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 2.8e-50 202.2 146 69.2
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.7e-50 201.8 115 79.1
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 4.8e-50 201.4 147 70.1
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.2e-50 201.1 143 70.6
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 6.2e-50 201.1 150 68.7
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 6.2e-50 201.1 150 66.7
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 8.1e-50 200.7 151 66.2
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 8.1e-50 200.7 149 64.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.1e-49 200.3 147 70.1
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.8e-49 199.5 139 70.5
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.4e-49 199.1 149 65.1
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 5.3e-49 198.0 147 66.0
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.2e-48 196.8 143 69.2
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.5e-48 196.4 149 64.4
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 2.0e-48 196.1 150 68.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 3.4e-48 195.3 135 70.4
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 3.4e-48 195.3 144 68.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 4.5e-48 194.9 135 69.6
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 5.8e-48 194.5 148 68.2
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 5.8e-48 194.5 148 63.5
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.0e-47 193.7 149 63.1
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.3e-47 193.4 148 65.5
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.3e-47 193.4 149 63.8
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.2e-47 192.6 145 66.2
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.2e-47 192.6 149 65.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 2.2e-47 192.6 116 75.0
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 2.9e-47 192.2 121 72.7
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.8e-47 191.8 149 62.4
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 8.4e-47 190.7 149 62.4
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.1e-46 190.3 146 63.7
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 3.2e-46 188.7 149 63.1
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 5.5e-46 188.0 116 74.1
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.6e-45 186.4 145 64.1
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.7e-45 185.7 99 82.8
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 3.9e-44 181.8 148 61.5
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.9e-43 179.5 153 63.4
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 3.7e-42 175.3 153 60.8
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 8.2e-42 174.1 148 58.8
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 3.1e-41 172.2 151 58.9
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 2.6e-40 169.1 89 83.1
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.4e-38 163.3 90 80.0
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 1.2e-37 160.2 115 67.8
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 2.1e-37 159.5 143 58.0
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.6e-37 158.7 124 66.9
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.6e-37 158.3 87 81.6
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.5e-35 153.3 121 61.2
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 6.3e-34 147.9 122 62.3
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 8.2e-34 147.5 114 64.0
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.8e-33 146.4 119 63.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.6e-29 133.3 116 56.9
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 1.6e-29 133.3 88 68.2
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.0e-27 126.3 125 56.0
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 2.6e-27 125.9 123 56.9
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-26 123.6 118 56.8
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.7e-26 123.2 152 46.1
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 6.9e-25 117.9 95 69.5
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.9e-22 109.8 114 45.6
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.8e-20 103.2 85 58.8
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 6.3e-18 94.7 92 47.8
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.7e-15 86.7 158 36.7
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 6.7e-12 74.7 87 49.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 2.0e-11 73.2 77 55.8
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 7.5e-11 71.2 77 54.5
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.0e-07 60.8 73 45.2


User provided reference genes

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