Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 0.0e+00 1257.3 690 100.0
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 3.4e-95 353.6 727 38.5
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 4.5e-95 353.2 727 41.3
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 5.1e-91 339.7 722 41.1
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 2.1e-76 291.2 725 37.2
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 1.2e-71 275.4 711 36.1
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 1.3e-70 271.9 721 35.6
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.2e-70 271.2 713 36.2
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 4.4e-66 256.9 715 36.2
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 5.7e-66 256.5 721 34.1
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 4.8e-65 253.4 721 33.1
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.1e-64 250.8 702 30.1
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 5.9e-63 246.5 724 33.7
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 1.3e-62 245.4 729 35.5
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 1.2e-60 238.8 725 33.8
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 1.6e-60 238.4 776 30.0
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 3.6e-60 237.3 726 32.2
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.4e-59 235.3 720 36.8
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 5.2e-59 233.4 727 34.1
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 3.4e-58 230.7 750 33.1
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 4.9e-57 226.9 737 29.7
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 6.3e-57 226.5 716 34.6
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 9.2e-56 222.6 743 32.4
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 5.6e-53 213.4 741 29.7
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 2.9e-49 201.1 807 29.0
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 8.3e-49 199.5 724 30.4
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.0e-47 194.9 706 30.3
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 4.6e-47 193.7 733 27.0
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 7.8e-47 193.0 707 29.7
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 1.3e-46 192.2 824 29.2
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 1.7e-46 191.8 725 31.2
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.7e-44 183.7 717 32.8
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.4e-43 182.2 841 30.3
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.4e-43 182.2 720 34.0
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.4e-43 182.2 718 34.1
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 3.1e-43 181.0 720 34.3
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 2.6e-42 177.9 787 25.9
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 5.8e-42 176.8 703 32.1
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 2.2e-41 174.9 717 34.9
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.9e-41 174.5 717 33.9
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 8.3e-41 172.9 719 32.0
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 5.4e-40 170.2 718 31.9
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.6e-39 168.7 685 29.5
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.6e-39 168.7 725 30.9
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 2.7e-39 167.9 707 30.8
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 1.7e-38 165.2 694 33.0
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 3.9e-38 164.1 695 28.1
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 8.6e-38 162.9 771 32.4
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 9.5e-37 159.5 689 34.7
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 9.5e-37 159.5 713 31.0
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 1.6e-36 158.7 725 33.1
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.0e-34 151.8 607 32.8
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 1.9e-32 145.2 723 27.9
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 2.4e-32 144.8 720 30.0
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 3.1e-27 127.9 728 31.0
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 1.7e-25 122.1 615 26.0
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 6.4e-25 120.2 91 60.4
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 4.0e-19 100.9 247 30.8
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 3.8e-17 94.4 733 28.0
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 3.5e-15 87.8 234 32.5
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 4.9e-09 67.4 50 58.0


User provided reference genes

Program Settings