Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.3e-110 403.3 237 100.0
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.0e-107 393.7 238 98.7
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.8e-67 260.0 233 63.5
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 8.3e-65 251.1 234 62.0
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 1.8e-64 250.0 246 63.4
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.2e-63 247.3 221 64.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.2e-63 247.3 235 60.9
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 3.5e-63 245.7 228 61.0
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 4.5e-63 245.4 234 61.1
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 3.8e-62 242.3 212 63.7
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 2.5e-61 239.6 233 60.9
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 3.2e-61 239.2 236 59.3
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 9.4e-61 237.7 221 60.2
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.6e-60 236.9 228 59.2
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 1.6e-60 236.9 222 60.4
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 3.6e-60 235.7 203 62.1
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 4.7e-60 235.3 224 59.4
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 6.1e-60 235.0 214 62.1
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 1.0e-59 234.2 201 63.2
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 1.0e-59 234.2 224 59.4
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.4e-59 233.8 184 69.0
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 2.3e-59 233.0 201 63.7
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 4.0e-59 232.3 200 63.5
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 4.0e-59 232.3 187 69.0
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 4.0e-59 232.3 187 69.0
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 5.2e-59 231.9 175 69.1
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 6.8e-59 231.5 170 68.2
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 6.8e-59 231.5 222 58.6
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 8.8e-59 231.1 234 59.4
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.2e-58 230.7 187 65.8
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 4.4e-58 228.8 212 59.9
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 5.7e-58 228.4 198 63.1
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 5.7e-58 228.4 212 60.4
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 9.8e-58 227.6 222 58.1
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 9.8e-58 227.6 179 67.6
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.3e-57 227.3 179 64.2
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 1.3e-57 227.3 188 63.3
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.7e-57 226.9 194 61.3
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 2.2e-57 226.5 224 57.6
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.8e-57 226.1 231 59.7
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 2.8e-57 226.1 189 64.6
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 2.8e-57 226.1 211 61.6
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 3.7e-57 225.7 170 70.6
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 8.3e-57 224.6 222 58.1
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 8.3e-57 224.6 216 60.2
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 1.1e-56 224.2 200 63.5
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.1e-56 224.2 234 59.0
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.4e-56 223.8 236 54.7
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 2.4e-56 223.0 176 65.9
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 3.1e-56 222.6 197 62.9
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 3.1e-56 222.6 234 59.0
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 4.1e-56 222.2 201 62.2
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 5.4e-56 221.9 188 62.2
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 7.0e-56 221.5 175 66.9
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 7.0e-56 221.5 193 62.7
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 3.5e-55 219.2 233 54.1
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.0e-54 217.6 201 61.2
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 1.0e-54 217.6 205 57.6
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.3e-54 217.2 180 66.7
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 1.3e-54 217.2 188 63.3
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.7e-54 216.9 207 61.4
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 2.3e-54 216.5 192 62.0
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.8e-54 215.7 168 64.9
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 5.0e-54 215.3 252 52.0
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 6.6e-54 214.9 236 53.8
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 1.1e-53 214.2 173 63.6
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 2.5e-53 213.0 221 57.0
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 2.5e-53 213.0 221 55.2
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 4.2e-53 212.2 182 62.6
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 4.2e-53 212.2 187 62.0
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 7.2e-53 211.5 177 62.1
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 1.6e-52 210.3 207 59.4
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 2.8e-52 209.5 198 57.6
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 2.8e-52 209.5 195 59.5
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 2.8e-52 209.5 178 63.5
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 4.7e-52 208.8 190 59.5
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 8.0e-52 208.0 178 61.8
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 8.0e-52 208.0 178 61.8
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 8.0e-52 208.0 178 61.8
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.4e-51 207.2 182 61.0
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 1.8e-51 206.8 207 57.5
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 4.0e-51 205.7 207 56.0
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 5.2e-51 205.3 187 59.4
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 8.9e-51 204.5 180 62.2
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 5.7e-50 201.8 170 61.8
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 5.7e-50 201.8 192 57.3
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 7.5e-50 201.4 187 57.8
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 7.5e-50 201.4 187 57.8
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 7.5e-50 201.4 187 57.8
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 9.8e-50 201.1 185 58.4
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 2.4e-48 196.4 226 52.7
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 2.4e-48 196.4 166 62.0
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 7.0e-48 194.9 244 50.8
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.2e-47 194.1 186 59.1
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.0e-47 193.4 151 68.9
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.7e-47 193.0 151 68.9
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 1.3e-46 190.7 157 65.0
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.7e-46 190.3 151 64.9
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.9e-46 189.5 132 73.5
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 2.9e-46 189.5 144 67.4
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 5.0e-46 188.7 139 71.9
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 8.6e-46 188.0 178 57.3
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.1e-45 187.6 157 68.2
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.6e-44 183.7 222 48.6
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 6.1e-44 181.8 112 81.2
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 1.8e-43 180.3 138 70.3
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 3.1e-43 179.5 111 78.4
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 3.1e-43 179.5 151 63.6
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 3.1e-43 179.5 194 50.5
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 8.9e-43 177.9 192 52.6
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 1.9e-40 170.2 163 58.3
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.2e-34 151.0 119 68.1
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 2.2e-33 146.7 162 51.9
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 4.9e-33 145.6 241 44.4
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.4e-32 143.3 149 59.7
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 1.2e-31 141.0 128 59.4
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.8e-28 129.8 82 80.5
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.4e-27 127.5 87 75.9
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 3.4e-26 122.9 87 73.6
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.6e-23 114.0 172 44.2
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 7.8e-23 111.7 108 59.3
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 8.6e-22 108.2 203 35.5
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 3.3e-21 106.3 102 54.9
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 3.3e-21 106.3 165 38.8
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 5.6e-21 105.5 69 75.4
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 3.6e-20 102.8 183 34.4
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 2.6e-18 96.7 116 44.0
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 9.9e-18 94.7 125 44.0
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 1.7e-17 94.0 148 39.9
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 3.8e-17 92.8 89 53.9
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 4.9e-17 92.4 176 36.4
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 1.2e-15 87.8 56 73.2
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.7e-14 84.0 66 66.7
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 3.9e-14 82.8 126 35.7
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.6e-13 79.0 78 57.7
HanXRQChr04g0110971 Helianthus annuus HOM05D000316 ORTHO05D012803 3.0e-06 56.6 63 54.0


User provided reference genes

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