Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 0.0e+00 1313.5 704 100.0
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 7.1e-189 664.8 682 57.3
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.1e-185 653.3 724 56.5
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.4e-181 640.6 704 55.0
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 6.0e-180 635.2 683 54.8
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.5e-170 604.0 663 54.0
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 4.5e-167 592.4 664 54.5
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 4.5e-167 592.4 664 54.5
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 5.0e-166 589.0 637 55.6
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.4e-163 580.9 708 51.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.3e-163 580.1 659 52.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 6.3e-161 572.0 698 50.6
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 6.5e-158 562.0 722 49.2
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 4.2e-157 559.3 710 49.3
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 4.7e-156 555.8 665 51.4
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 3.0e-155 553.1 677 50.2
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 1.1e-154 551.2 615 52.7
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 3.7e-153 546.2 695 48.8
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 8.2e-153 545.0 668 50.3
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 1.1e-152 544.7 712 48.3
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.1e-152 544.7 694 50.0
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 3.1e-152 543.1 668 50.6
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.2e-151 541.2 706 48.6
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.5e-151 539.7 662 50.2
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 1.0e-150 538.1 675 49.8
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.3e-150 537.7 701 48.8
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.9e-150 536.6 708 48.4
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.1e-149 534.6 674 50.4
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 3.2e-149 533.1 688 49.6
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.2e-149 533.1 678 49.3
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.2e-149 533.1 666 49.5
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.2e-149 532.7 656 50.6
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 5.5e-149 532.3 695 49.4
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.6e-148 530.8 679 48.9
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.8e-147 527.3 670 49.4
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.2e-147 525.8 677 49.3
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 6.7e-147 525.4 667 49.9
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 5.7e-146 522.3 654 50.2
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 9.7e-146 521.5 702 47.3
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 2.8e-145 520.0 712 47.5
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 2.4e-144 516.9 657 49.6
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.1e-144 516.5 644 48.9
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 7.0e-144 515.4 662 49.8
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.6e-143 513.5 696 47.4
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 3.5e-143 513.1 682 48.5
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 7.7e-143 511.9 669 49.0
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.0e-142 511.5 674 48.1
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.0e-142 511.5 623 50.2
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.2e-140 504.6 721 45.9
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 1.4e-139 501.1 632 49.2
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.5e-138 497.7 726 45.7
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 2.0e-138 497.3 675 48.1
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 3.4e-138 496.5 687 47.9
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 7.5e-138 495.4 668 46.7
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 8.3e-137 491.9 719 45.3
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.1e-136 491.5 664 46.4
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 4.1e-136 489.6 787 42.6
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.2e-135 488.0 729 46.0
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 2.9e-134 483.4 665 47.1
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.9e-134 483.4 724 45.3
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 2.5e-133 480.3 655 47.5
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 9.4e-133 478.4 661 46.7
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.6e-132 477.6 624 47.9
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 4.0e-131 473.0 704 47.9
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 1.5e-130 471.1 659 45.7
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 3.4e-130 469.9 675 45.3
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 6.3e-129 465.7 696 44.1
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.1e-128 464.9 709 44.6
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.1e-128 464.9 674 46.3
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 3.1e-128 463.4 641 46.6
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 2.7e-127 460.3 612 47.1
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 1.3e-126 458.0 657 46.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 5.0e-126 456.1 689 47.2
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.5e-125 454.5 674 43.0
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 9.5e-125 451.8 644 46.6
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 3.0e-123 446.8 683 44.1
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 9.8e-122 441.8 653 45.2
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.8e-120 437.6 676 45.3
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.8e-120 437.6 683 42.8
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 2.4e-120 437.2 642 44.9
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.2e-119 434.9 665 43.9
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 1.2e-119 434.9 642 44.9
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.6e-119 434.5 651 43.8
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 5.9e-119 432.6 716 42.7
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 4.3e-117 426.4 645 44.0
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 6.1e-116 422.5 529 50.9
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.6e-114 417.2 543 48.1
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.6e-114 417.2 654 42.8
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.6e-111 407.9 545 46.8
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 1.9e-109 401.0 581 47.0
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 6.2e-108 396.0 594 42.9
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 5.8e-106 389.4 658 41.8
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 1.3e-105 388.3 684 39.8
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 2.1e-103 380.9 707 39.9
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 2.7e-103 380.6 672 41.1
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 9.5e-101 372.1 565 45.5
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.6e-100 371.3 650 39.2
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 4.0e-99 366.7 602 41.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.7e-97 361.3 653 38.6
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 1.3e-94 351.7 664 39.0
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.1e-93 348.6 735 37.4
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 2.0e-90 337.8 639 41.0
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 3.4e-90 337.0 578 39.6
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 3.4e-90 337.0 578 39.6
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 9.9e-90 335.5 629 39.0
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 4.9e-89 333.2 503 44.7
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 3.2e-88 330.5 670 37.9
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 6.2e-84 316.2 283 60.8
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 9.9e-82 308.9 467 45.2
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 8.4e-81 305.8 688 38.5
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 9.3e-80 302.4 497 41.0
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 5.6e-77 293.1 443 44.7
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 5.3e-75 286.6 614 38.3
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 6.9e-75 286.2 263 58.9
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.2e-74 285.4 186 74.2
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.5e-66 256.9 201 63.7
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 8.2e-60 236.1 508 36.6
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 3.2e-56 224.2 236 50.4
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 1.6e-55 221.9 502 35.3
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 7.2e-48 196.4 552 32.8
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 3.7e-44 184.1 205 44.4
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.4e-40 172.2 164 57.9
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 6.1e-39 166.8 159 59.1
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.5e-37 162.2 161 55.9
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 4.8e-36 157.1 121 64.5
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 6.3e-36 156.8 418 33.5
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.1e-32 146.0 251 40.2
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 4.2e-32 144.1 146 55.5
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 7.2e-32 143.3 457 28.9
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 4.7e-31 140.6 210 44.3
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 3.0e-30 137.9 100 66.0
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 1.3e-25 122.5 214 36.4
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 4.2e-24 117.5 426 27.9
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 1.8e-22 112.1 83 65.1
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 8.8e-22 109.8 144 45.1
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 1.2e-21 109.4 74 67.6
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 4.4e-21 107.5 148 44.6
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 6.5e-17 93.6 108 52.8
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.5e-16 91.7 72 61.1
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 3.0e-14 84.7 73 54.8
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 2.0e-13 82.0 49 79.6
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 8.3e-12 76.6 135 37.8
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 2.7e-10 71.6 176 30.1
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 2.3e-09 68.6 123 43.9
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 2.3e-09 68.6 62 54.8
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.9e-08 65.5 48 64.6
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 5.6e-08 63.9 53 64.2
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 5.2e-06 57.4 42 61.9


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