Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 3.7e-105 384.8 183 100.0
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 2.4e-72 275.8 179 71.5
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 9.2e-72 273.9 179 70.4
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 2.8e-68 262.3 183 65.0
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 4.7e-68 261.5 182 65.4
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.4e-67 260.0 182 65.9
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.4e-67 260.0 182 65.9
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 1.4e-67 260.0 174 70.1
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 3.1e-67 258.8 180 66.1
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 3.1e-67 258.8 175 67.4
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 4.0e-67 258.5 178 65.2
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 1.5e-66 256.5 180 66.1
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 2.6e-66 255.8 183 64.5
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 2.6e-66 255.8 183 64.5
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 3.4e-66 255.4 175 68.6
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 4.4e-66 255.0 177 65.0
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 4.4e-66 255.0 183 64.5
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 5.8e-66 254.6 178 66.3
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 7.5e-66 254.2 182 64.3
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 9.8e-66 253.8 180 67.2
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 1.3e-65 253.4 181 65.7
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.3e-65 253.4 183 63.4
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 1.3e-65 253.4 177 65.0
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 2.2e-65 252.7 183 63.4
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.2e-65 252.7 183 63.4
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 3.7e-65 251.9 180 65.0
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 4.9e-65 251.5 179 63.1
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 4.9e-65 251.5 177 65.5
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 6.4e-65 251.1 178 65.2
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.4e-65 251.1 181 63.5
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.4e-64 250.0 177 63.3
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 1.4e-64 250.0 177 63.8
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 1.4e-64 250.0 173 67.1
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 1.4e-64 250.0 176 64.2
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 1.9e-64 249.6 173 67.1
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 3.2e-64 248.8 177 63.3
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 4.1e-64 248.4 173 67.6
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 5.4e-64 248.1 179 63.7
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 9.2e-64 247.3 175 66.9
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 1.2e-63 246.9 176 63.6
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 1.2e-63 246.9 178 61.8
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 1.6e-63 246.5 177 64.4
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 1.6e-63 246.5 172 64.0
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 2.0e-63 246.1 177 62.1
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 2.7e-63 245.7 176 61.9
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 2.7e-63 245.7 177 62.7
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 3.5e-63 245.4 178 61.8
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 3.5e-63 245.4 175 62.9
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 3.5e-63 245.4 175 62.3
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 6.0e-63 244.6 172 65.1
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 6.0e-63 244.6 174 66.1
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 7.8e-63 244.2 176 62.5
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 1.7e-62 243.0 181 60.2
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 2.3e-62 242.7 175 64.6
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 3.0e-62 242.3 181 61.3
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 3.0e-62 242.3 178 62.4
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 3.9e-62 241.9 184 61.4
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 5.0e-62 241.5 176 60.8
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 5.0e-62 241.5 184 60.9
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 6.6e-62 241.1 172 66.3
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 8.6e-62 240.7 183 59.6
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 1.5e-61 240.0 178 61.8
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 1.9e-61 239.6 178 61.8
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 2.5e-61 239.2 182 60.4
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 5.6e-61 238.0 176 63.1
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 7.3e-61 237.7 173 61.8
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 7.3e-61 237.7 180 58.9
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 7.3e-61 237.7 172 63.4
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 9.5e-61 237.3 178 61.8
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 1.2e-60 236.9 176 60.2
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 1.6e-60 236.5 172 61.6
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 1.6e-60 236.5 178 60.7
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 2.1e-60 236.1 176 60.8
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 2.8e-60 235.7 181 59.1
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 6.2e-60 234.6 164 63.4
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.1e-59 233.8 172 61.0
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.4e-59 233.4 164 62.8
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 4.0e-59 231.9 172 64.0
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 8.9e-59 230.7 177 57.6
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 3.4e-58 228.8 172 61.6
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 4.4e-58 228.4 180 58.9
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 4.4e-58 228.4 175 60.0
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 7.5e-58 227.6 175 56.6
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 1.3e-57 226.9 176 57.4
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 1.1e-56 223.8 164 62.2
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 3.2e-56 222.2 154 66.9
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 7.1e-56 221.1 175 60.0
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 3.5e-55 218.8 181 54.1
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 7.8e-55 217.6 177 56.5
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 7.8e-55 217.6 177 56.5
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.3e-54 216.9 169 58.6
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 5.1e-54 214.9 151 66.9
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.1e-53 213.8 154 63.0
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.1e-53 213.8 153 64.7
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 4.3e-53 211.8 163 62.0
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 7.3e-53 211.1 170 55.9
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 4.7e-52 208.4 171 55.6
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 1.1e-51 207.2 172 54.1
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 4.0e-51 205.3 155 61.3
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 5.2e-51 204.9 151 63.6
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 9.9e-50 200.7 160 56.9
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 4.9e-49 198.4 172 54.1
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 8.4e-49 197.6 160 56.2
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 1.9e-48 196.4 175 54.3
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 3.1e-43 179.1 173 49.1
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 9.0e-43 177.6 183 48.1
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 2.0e-42 176.4 174 47.7
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 6.0e-39 164.9 182 45.1
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 3.0e-38 162.5 130 57.7
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 8.1e-36 154.5 120 55.0
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 2.9e-33 146.0 116 62.9
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 1.9e-32 143.3 176 39.8
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 2.4e-27 126.3 136 50.7
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 3.7e-20 102.4 157 35.7
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 8.4e-17 91.3 173 30.6
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 1.1e-16 90.9 75 58.7
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 1.1e-16 90.9 188 31.9
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.6e-12 77.0 57 54.4
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 1.4e-11 73.9 92 47.8
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 2.2e-09 66.6 175 27.4
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 3.2e-08 62.8 178 28.1
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.6e-07 60.5 176 27.8
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.6e-07 60.5 176 27.3
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 2.7e-07 59.7 173 26.6
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 2.7e-07 59.7 173 27.2
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.6e-07 59.3 170 28.8
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.6e-07 58.9 176 27.3
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.6e-07 58.9 176 27.3
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 6.1e-07 58.5 185 26.5
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 6.1e-07 58.5 174 25.9


User provided reference genes

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