Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 4.1e-108 394.8 209 100.0
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 6.6e-74 281.2 209 71.8
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 2.3e-71 272.7 206 70.9
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 2.6e-70 269.2 200 71.5
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 4.4e-70 268.5 196 71.4
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 6.4e-69 264.6 205 68.3
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 7.0e-68 261.2 202 66.8
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 6.0e-67 258.1 209 65.6
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.0e-66 257.3 197 71.6
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 3.0e-66 255.8 212 67.5
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 1.1e-65 253.8 205 66.8
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 1.9e-65 253.1 205 66.8
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.3e-65 251.9 207 64.3
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 7.3e-65 251.1 212 63.2
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 2.8e-64 249.2 197 66.0
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 2.8e-64 249.2 206 63.6
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 6.2e-64 248.1 205 62.9
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.8e-63 246.5 211 63.5
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 8.9e-63 244.2 204 66.2
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 1.2e-62 243.8 201 64.2
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.2e-62 243.8 211 63.0
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 1.2e-62 243.8 239 57.7
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 2.6e-62 242.7 201 64.2
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 2.6e-62 242.7 201 64.2
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 3.4e-62 242.3 203 64.5
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 4.4e-62 241.9 211 62.6
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.8e-62 241.5 211 62.6
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 7.5e-62 241.1 209 61.7
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 7.5e-62 241.1 198 64.6
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 1.3e-61 240.4 204 61.8
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 2.2e-61 239.6 197 64.5
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.9e-61 239.2 208 62.5
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 3.7e-61 238.8 197 64.5
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 6.4e-61 238.0 209 61.2
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 6.4e-61 238.0 209 61.2
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 8.3e-61 237.7 203 62.6
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 8.3e-61 237.7 203 65.0
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 8.3e-61 237.7 199 64.8
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 1.1e-60 237.3 199 63.3
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 2.4e-60 236.1 213 62.9
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 3.2e-60 235.7 198 65.2
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.2e-60 235.7 209 59.8
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 4.1e-60 235.3 197 64.5
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 4.1e-60 235.3 202 61.9
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 4.1e-60 235.3 209 60.3
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 4.1e-60 235.3 189 64.0
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 5.4e-60 235.0 208 61.5
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 5.4e-60 235.0 210 60.5
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 7.0e-60 234.6 189 65.1
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 7.0e-60 234.6 190 65.8
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 9.2e-60 234.2 199 62.8
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 9.2e-60 234.2 199 62.3
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 1.2e-59 233.8 204 63.2
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.6e-59 233.4 211 61.6
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.6e-59 233.4 211 61.6
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 2.1e-59 233.0 215 60.9
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 2.7e-59 232.6 190 65.8
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 3.5e-59 232.3 199 62.3
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 3.5e-59 232.3 199 62.3
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 4.6e-59 231.9 204 59.3
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 4.6e-59 231.9 196 61.7
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 6.0e-59 231.5 201 62.2
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 6.0e-59 231.5 203 60.1
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 7.8e-59 231.1 198 62.1
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.0e-58 230.7 196 61.7
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.0e-58 230.7 196 61.7
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 1.0e-58 230.7 213 60.1
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.0e-58 230.7 204 58.8
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.3e-58 230.3 198 62.1
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.7e-58 229.9 198 62.1
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 2.3e-58 229.6 196 62.2
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 3.0e-58 229.2 191 63.9
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 5.1e-58 228.4 190 62.6
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 6.6e-58 228.0 199 62.3
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 6.6e-58 228.0 204 61.3
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 8.6e-58 227.6 200 62.5
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 8.6e-58 227.6 196 63.3
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 1.1e-57 227.3 205 59.0
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 2.5e-57 226.1 209 56.9
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 3.3e-57 225.7 199 59.3
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 7.3e-57 224.6 198 62.6
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 9.5e-57 224.2 198 61.1
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 9.5e-57 224.2 197 60.4
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.2e-56 223.8 208 60.6
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 1.2e-56 223.8 199 58.3
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 2.8e-56 222.6 208 58.2
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 3.6e-56 222.2 198 59.1
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.1e-55 220.7 188 59.6
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.4e-55 220.3 204 57.4
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.4e-55 220.3 207 57.5
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 1.8e-55 219.9 176 65.3
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 3.1e-55 219.2 209 60.3
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 2.6e-54 216.1 205 58.5
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.3e-53 213.8 197 58.9
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 2.9e-53 212.6 189 58.7
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 3.7e-53 212.2 202 55.4
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.9e-53 211.8 162 67.9
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.9e-53 211.8 162 67.9
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 3.2e-52 209.1 182 60.4
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 5.4e-52 208.4 201 58.2
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 1.2e-51 207.2 138 75.4
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 6.0e-51 204.9 201 57.2
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 3.3e-49 199.1 169 62.1
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 2.1e-48 196.4 365 37.0
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 6.8e-47 191.4 155 62.6
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 1.2e-46 190.7 200 56.0
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 2.7e-43 179.5 138 68.8
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 5.8e-38 161.8 156 52.6
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 3.2e-36 156.0 127 62.2
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 2.7e-35 152.9 183 46.4
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 7.8e-35 151.4 111 71.2
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.0e-34 151.0 127 60.6
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 8.7e-34 147.9 102 74.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 7.3e-33 144.8 114 69.3
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 9.6e-33 144.4 201 40.3
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 2.1e-32 143.3 130 60.0
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 4.9e-29 132.1 139 52.5
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.0e-26 124.4 120 54.2
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 1.4e-23 114.0 103 58.3
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 6.9e-23 111.7 200 34.0
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 4.5e-22 109.0 179 42.5
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.9e-21 106.3 127 46.5
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 2.5e-20 103.2 76 69.7
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.1e-17 94.4 74 70.3
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 2.9e-13 79.7 88 47.7
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 2.5e-12 76.6 61 67.2
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 3.2e-12 76.3 55 69.1
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 7.1e-12 75.1 54 64.8
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 9.3e-12 74.7 72 56.9
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 6.1e-11 72.0 180 29.4
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.6e-08 63.9 46 67.4


User provided reference genes

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