Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02564 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 2.3e-102 375.6 186 100.0
Aqoxy5G02842 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 1.4e-91 339.7 186 89.2
TAR369G0168 Trochodendron aralioides HOM05D005619 ORTHO05D006696 3.1e-83 312.0 187 80.7
Nn2g11500 Nelumbo nucifera HOM05D005619 ORTHO05D006696 4.9e-81 304.7 187 80.2
PSO339G2325 Papaver somniferum HOM05D005619 ORTHO05D006696 8.4e-81 303.9 182 78.0
MBI05_g05306_MAGBIO Magnolia biondii HOM05D005619 ORTHO05D006696 3.5e-79 298.5 184 79.3
Sc11g0001040 Simmondsia chinensis HOM05D005619 ORTHO05D006696 1.1e-75 287.0 187 75.9
GSVIVG01032822001 Vitis vinifera HOM05D005619 ORTHO05D006696 1.8e-75 286.2 187 75.4
Hund13861 Selenicereus undatus HOM05D005619 ORTHO05D006696 2.0e-74 282.7 187 73.8
AUR62034382 Chenopodium quinoa HOM05D005619 ORTHO05D006696 7.6e-74 280.8 186 72.0
AUR62022323 Chenopodium quinoa HOM05D005619 ORTHO05D006696 2.9e-73 278.9 186 71.5
CANSAT56G2799 Cannabis sativa HOM05D005619 ORTHO05D006696 3.2e-72 275.4 187 72.2
CDE04G2394 Ceratophyllum demersum HOM05D005619 ORTHO05D006696 1.6e-71 273.1 182 73.6
Dinv16155 Davidia involucrata HOM05D005619 ORTHO05D006696 4.6e-71 271.6 187 69.0
Medtr3g070470 Medicago truncatula HOM05D005619 ORTHO05D006696 1.8e-70 269.6 187 67.4
AL5G36640 Arabidopsis lyrata HOM05D005619 ORTHO05D006696 8.7e-70 267.3 187 69.0
CsaV3_6G001830 Cucumis sativus L. HOM05D005619 ORTHO05D006696 8.7e-70 267.3 187 69.0
Zm00001eb412290 Zea mays HOM05D005619 ORTHO05D006696 8.7e-70 267.3 184 70.7
AT1G19080 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.9e-69 266.2 187 68.4
AT3G55490 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.9e-69 266.2 187 68.4
EL10Ac2g04534 Beta vulgaris HOM05D005619 ORTHO05D006696 1.9e-69 266.2 187 70.6
Atru.chr12.29 Acer truncatum HOM05D005619 ORTHO05D006696 4.3e-69 265.0 186 68.8
Lj1g0018800 Lotus japonicus HOM05D005619 ORTHO05D006696 7.4e-69 264.2 187 66.3
Os08g0274700 Oryza sativa ssp. japonica HOM05D005619 ORTHO05D006696 9.7e-69 263.8 184 70.1
QL08p063145 Quercus lobata HOM05D005619 ORTHO05D006696 1.3e-68 263.5 186 68.8
Sed0003089 Sechium edule HOM05D005619 ORTHO05D006696 1.6e-68 263.1 187 67.4
arahy.Tifrunner.gnm1.ann1.IDH5I9 Arachis hypogaea HOM05D005619 ORTHO05D006696 2.8e-68 262.3 187 68.4
Sabra08G0050000 Salix brachista HOM05D005619 ORTHO05D006696 3.7e-68 261.9 187 70.6
HPP92_000422 Vanilla planifolia HOM05D000755 ORTHO05D006696 3.7e-68 261.9 184 70.1
Actinidia31994 Actinidia chinensis HOM05D005619 ORTHO05D006696 4.8e-68 261.5 187 67.4
FvH4_7g24440 Fragaria vesca HOM05D005619 ORTHO05D006696 4.8e-68 261.5 187 69.0
arahy.Tifrunner.gnm1.ann1.2YL4XG Arachis hypogaea HOM05D005619 ORTHO05D006696 8.2e-68 260.8 187 67.4
Zm00001eb198650 Zea mays HOM05D005619 ORTHO05D006696 8.2e-68 260.8 184 69.6
Lj3A878T24 Lonicera japonica HOM05D005619 ORTHO05D006696 1.1e-67 260.4 187 67.4
RcHm_v2.0_Chr1g0370121 Rosa chinensis HOM05D005619 ORTHO05D006696 1.1e-67 260.4 187 69.0
FAN10G0566 Fragaria x ananassa HOM05D005619 ORTHO05D006696 1.4e-67 260.0 187 68.4
HPP92_000355 Vanilla planifolia HOM05D000755 ORTHO05D000642 1.4e-67 260.0 184 69.6
Lj6g0025019 Lotus japonicus HOM05D005619 ORTHO05D006696 1.8e-67 259.6 187 66.3
FAN01G2425 Fragaria x ananassa HOM05D005619 ORTHO05D006696 2.4e-67 259.2 187 68.4
Hma1.2p1_2256F.1_g318210 Hydrangea macrophylla HOM05D005619 ORTHO05D006696 3.1e-67 258.8 184 67.9
Thhalv10017287m.g Eutrema salsugineum HOM05D005619 ORTHO05D006696 5.3e-67 258.1 183 70.5
Cpa.g.sc19.176 Carica papaya HOM05D005619 ORTHO05D006696 6.9e-67 257.7 187 66.8
Psat5g128520 Pisum sativum HOM05D005619 ORTHO05D006696 1.2e-66 256.9 187 65.2
THA.LOC104824313 Tarenaya hassleriana HOM05D005619 ORTHO05D006696 1.2e-66 256.9 183 68.3
CARHR135030 Cardamine hirsuta HOM05D005619 ORTHO05D006696 2.0e-66 256.1 187 69.5
CARHR165540 Cardamine hirsuta HOM05D005619 ORTHO05D006696 2.0e-66 256.1 187 67.9
TAR633G2706 Trochodendron aralioides HOM05D005619 ORTHO05D006696 2.0e-66 256.1 149 80.5
Lalb_Chr03g0027081 Lupinus albus HOM05D005619 ORTHO05D006696 3.4e-66 255.4 187 66.3
Thecc.10G016900 Theobroma cacao HOM05D005619 ORTHO05D006696 4.5e-66 255.0 187 66.8
TPR.G16245 Trifolium pratense HOM05D005619 ORTHO05D006696 4.5e-66 255.0 193 64.8
VMungo1383G0062 Vigna mungo HOM05D005619 ORTHO05D006696 4.5e-66 255.0 185 65.9
CSS0006168 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 5.9e-66 254.6 187 66.8
Carub.0005s2221 Capsella rubella HOM05D005619 ORTHO05D006696 1.0e-65 253.8 187 66.3
Potri.008G068100 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.3e-65 253.4 187 67.9
Potri.010G189200 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.3e-65 253.4 187 69.5
ClCG11G006160 Citrullus lanatus HOM05D005619 ORTHO05D006696 2.2e-65 252.7 187 66.3
Duzib128G1619 Durio zibethinus HOM05D005619 ORTHO05D006696 2.2e-65 252.7 187 65.8
Glyma.18G027600 Glycine max HOM05D005619 ORTHO05D006696 2.2e-65 252.7 187 65.8
Phvul.001G242800 Phaseolus vulgaris HOM05D005619 ORTHO05D006696 2.2e-65 252.7 187 64.7
Prupe.2G202300 Prunus persica HOM05D005619 ORTHO05D006696 2.2e-65 252.7 187 64.7
MD01G1152600 Malus domestica HOM05D005619 ORTHO05D006696 2.9e-65 252.3 187 66.3
PGR142G0483 Punica granatum HOM05D005619 ORTHO05D006696 2.9e-65 252.3 187 66.8
Prupe.2G249700 Prunus persica HOM05D005619 ORTHO05D006696 5.0e-65 251.5 187 64.2
Glyma.11G229600 Glycine max HOM05D005619 ORTHO05D006696 6.5e-65 251.1 187 65.2
Manes.04G157300 Manihot esculenta HOM05D005619 ORTHO05D006696 1.9e-64 249.6 187 67.4
Ciclev10033435m.g Citrus clementina HOM05D005619 ORTHO05D006696 2.5e-64 249.2 172 68.6
DCAR_026757 Daucus carota HOM05D005619 ORTHO05D006696 3.2e-64 248.8 187 65.2
Duzib114G0170 Durio zibethinus HOM05D005619 ORTHO05D006696 4.2e-64 248.4 183 65.6
Sp4g22380 Schrenkiella parvula HOM05D005619 ORTHO05D006696 4.2e-64 248.4 183 67.2
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 5.5e-64 248.1 187 66.8
Gohir.A06G163800 Gossypium hirsutum HOM05D005619 ORTHO05D006696 9.4e-64 247.3 183 65.0
Gohir.D06G169500 Gossypium hirsutum HOM05D005619 ORTHO05D006696 9.4e-64 247.3 183 65.0
Gorai.010G198200 Gossypium raimondii HOM05D005619 ORTHO05D006696 9.4e-64 247.3 183 65.0
ATR0481G004 Amborella trichopoda HOM05D005619 ORTHO05D006696 2.7e-63 245.7 184 63.0
BcaNung05464 Brassica carinata HOM05D005619 ORTHO05D006696 2.7e-63 245.7 183 68.3
Eucgr.G03057 Eucalyptus grandis HOM05D005619 ORTHO05D006696 3.0e-62 242.3 187 63.6
Oeu057772.1 Olea europaea HOM05D005619 ORTHO05D006696 3.0e-62 242.3 187 64.7
BraA04t18498Z Brassica rapa HOM05D005619 ORTHO05D006696 3.9e-62 241.9 183 66.7
Haze_17223 Corylus avellana HOM05D005619 ORTHO05D006696 8.8e-62 240.7 187 64.2
HanXRQChr08g0213181 Helianthus annuus HOM05D005619 ORTHO05D006696 8.8e-62 240.7 184 64.7
HanXRQChr15g0468911 Helianthus annuus HOM05D005619 ORTHO05D006696 8.8e-62 240.7 184 64.1
Cfa001322 Carpinus fangiana HOM05D005619 ORTHO05D006696 1.1e-61 240.4 187 63.6
ECA233G2873 Erigeron canadensis HOM05D005619 ORTHO05D006696 1.1e-61 240.4 184 64.1
A04p30090 Brassica napus HOM05D005619 ORTHO05D006696 2.0e-61 239.6 180 67.2
CiPaw.02G192300 Carya illinoinensis HOM05D000781 ORTHO05D000643 2.5e-61 239.2 178 64.0
BolC4t28280H Brassica oleracea HOM05D005619 ORTHO05D006696 1.3e-60 236.9 181 66.3
Lalb_Chr01g0004131 Lupinus albus HOM05D005619 ORTHO05D006696 1.3e-60 236.9 208 59.1
SalBow8G4625 Salvia bowleyana HOM05D005619 ORTHO05D006696 2.8e-60 235.7 187 62.6
MSTRG.870 Avicennia marina HOM05D005619 ORTHO05D006696 3.7e-60 235.3 186 62.4
CiPaw.08G091200 Carya illinoinensis HOM05D005619 ORTHO05D006696 3.7e-60 235.3 187 61.5
BcaC02g07350 Brassica carinata HOM05D005619 ORTHO05D006696 1.1e-59 233.8 182 65.4
C04p67770 Brassica napus HOM05D005619 ORTHO05D006696 1.8e-59 233.0 181 65.7
Lsat_1_v5_gn_8_41961 Lactuca sativa HOM05D005619 ORTHO05D006696 1.8e-59 233.0 184 63.0
HanXRQChr09g0271791 Helianthus annuus HOM05D005619 ORTHO05D006696 5.3e-59 231.5 184 63.0
CAN.G1489.22 Capsicum annuum HOM05D005619 ORTHO05D006696 1.2e-58 230.3 189 61.4
ECA247G2146 Erigeron canadensis HOM05D005619 ORTHO05D006696 1.5e-58 229.9 184 61.4
Cc03_g10740 Coffea canephora HOM05D005619 ORTHO05D006696 7.7e-58 227.6 189 60.3
Migut.E00386 Erythranthe guttata HOM05D005619 ORTHO05D006696 1.0e-57 227.3 187 59.9
Peaxi162Scf00451g00930 Petunia axillaris HOM05D005619 ORTHO05D006696 1.3e-57 226.9 189 60.3
unitig_52.g17125 Utricularia gibba HOM05D005619 ORTHO05D006696 1.3e-57 226.9 185 61.1
PGSC0003DMG400030566 Solanum tuberosum HOM05D005619 ORTHO05D006696 6.5e-57 224.6 189 59.3
COL.COLO4_25718 Corchorus olitorius HOM05D005619 ORTHO05D006696 8.5e-57 224.2 187 63.1
Solyc05g008620.4 Solanum lycopersicum HOM05D005619 ORTHO05D006696 1.1e-56 223.8 189 59.3
Sopen05g004460 Solanum pennellii HOM05D005619 ORTHO05D006696 1.1e-56 223.8 189 59.3
SGA_v2.0_scaffold170G38815 Striga asiatica HOM05D005619 ORTHO05D006696 1.4e-56 223.4 187 59.4
TWI53G0619 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 3.2e-56 222.2 169 66.3
BcaC02g07392 Brassica carinata HOM05D005619 ORTHO05D006696 2.7e-55 219.2 165 68.5
SMO356G0622 Selaginella moellendorffii HOM05D005619 ORTHO05D006696 2.3e-54 216.1 185 55.1
FAN06G3728 Fragaria x ananassa HOM05D005619 ORTHO05D006696 2.2e-52 209.5 148 67.6
Mapoly0053s0030 Marchantia polymorpha HOM05D005619 ORTHO05D006696 2.4e-51 206.1 183 54.1
CSS0006460 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 1.2e-50 203.8 168 61.3
DCAR_023625 Daucus carota HOM05D005619 ORTHO05D006696 1.2e-50 203.8 150 63.3
Mapoly0034s0059 Marchantia polymorpha HOM05D005619 ORTHO05D006696 1.5e-50 203.4 183 53.0
Cc03_g13530 Coffea canephora HOM05D005619 ORTHO05D006696 1.0e-49 200.7 166 61.4
SalBow8G2997 Salvia bowleyana HOM05D005619 ORTHO05D006696 2.9e-49 199.1 205 53.7
Nitab4.5_0000350g0020 Nicotiana tabacum HOM05D005619 ORTHO05D006696 6.5e-49 198.0 189 56.1
Pp3c25_12660 Physcomitrium patens HOM05D005619 ORTHO05D006696 6.5e-49 198.0 185 50.8
AagrBONN_evm.TU.Sc2ySwM_228.5247 Anthoceros agrestis HOM05D005619 ORTHO05D006696 4.2e-48 195.3 182 53.3
Peaxi162Scf00205g01136 Petunia axillaris HOM05D005619 ORTHO05D006696 3.6e-47 192.2 150 64.7
MELO3C029903.2 Cucumis melo HOM05D005619 ORTHO05D006696 2.3e-46 189.5 201 53.2
TWI73G0774 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 1.4e-43 180.3 183 51.9
C04p07340 Brassica napus HOM05D004515 ORTHO05D006013 1.6e-42 176.8 145 67.6
AagrBONN_evm.TU.Sc2ySwM_344.729 Anthoceros agrestis HOM05D005619 ORTHO05D006696 4.5e-42 175.3 182 47.3
Sabra10G0145900 Salix brachista HOM05D005619 ORTHO05D006696 1.0e-41 174.1 187 54.5
FAN06G2505 Fragaria x ananassa HOM05D005619 ORTHO05D006696 1.3e-41 173.7 148 60.1
Nitab4.5_0003886g0110 Nicotiana tabacum HOM05D005619 ORTHO05D006696 1.9e-40 169.9 187 50.3
CBR_g38120 Chara braunii HOM05D005619 ORTHO05D006696 1.8e-38 163.3 187 43.3
Aa31LG5G19540 Aethionema arabicum HOM05D005619 ORTHO05D006696 9.7e-37 157.5 104 69.2
CARHR159370 Cardamine hirsuta HOM05D005619 ORTHO05D006696 2.4e-35 152.9 109 65.1
ATR0568G146 Amborella trichopoda HOM05D005619 ORTHO05D006696 5.2e-30 135.2 117 58.1
BolC4t22357H Brassica oleracea HOM05D004515 ORTHO05D006013 4.4e-29 132.1 154 49.4
AagrBONN_evm.TU.Sc2ySwM_344.737 Anthoceros agrestis HOM05D005619 ORTHO05D006696 2.9e-25 119.4 104 53.8
Actinidia33632 Actinidia chinensis HOM05D005619 ORTHO05D006696 1.1e-24 117.5 98 59.2
MCO08G248 Micromonas commoda HOM05D005619 ORTHO05D006696 3.4e-21 105.9 169 35.5
Cre06.g251750 Chlamydomonas reinhardtii HOM05D005619 ORTHO05D006696 5.7e-21 105.1 187 32.1
C04p07380 Brassica napus HOM05D005619 ORTHO05D006696 3.7e-20 102.4 133 45.1
BcaB08g35316 Brassica carinata HOM05D005619 ORTHO05D006696 1.0e-17 94.4 72 61.1
HanXRQChr01g0017101 Helianthus annuus HOM05D005619 ORTHO05D006696 2.9e-17 92.8 62 66.1
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 4.7e-15 85.5 83 59.0
HanXRQChr12g0375531 Helianthus annuus HOM05D005619 ORTHO05D006696 4.4e-13 79.0 73 50.7
PRCOL_00002083 Prasinoderma coloniale HOM05D005619 ORTHO05D006696 1.7e-09 67.0 150 32.0
Cfa027228 Carpinus fangiana HOM05D005619 ORTHO05D006696 5.0e-09 65.5 177 24.9


User provided reference genes

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