Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 3.4e-150 535.0 279 100.0
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.5e-68 263.1 280 54.3
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.5e-68 263.1 261 58.6
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 7.2e-68 261.5 259 55.6
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 7.2e-68 261.5 269 55.4
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 7.9e-67 258.1 270 55.6
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.3e-66 256.5 263 54.4
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.3e-66 256.5 269 54.3
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 8.8e-66 254.6 264 56.4
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.1e-65 254.2 254 57.1
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 3.3e-65 252.7 258 59.3
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 4.4e-65 252.3 269 53.9
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 7.4e-65 251.5 257 54.5
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 7.4e-65 251.5 253 56.9
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 9.7e-65 251.1 269 53.5
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 3.7e-64 249.2 248 55.6
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.1e-63 247.7 260 55.4
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 2.4e-63 246.5 224 59.4
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 2.4e-63 246.5 258 56.6
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 2.4e-63 246.5 265 52.1
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 3.1e-63 246.1 258 53.9
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 5.3e-63 245.4 228 58.3
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.2e-62 244.2 259 53.7
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.6e-62 243.8 247 59.9
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 2.6e-62 243.0 260 51.9
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.5e-62 242.7 217 59.0
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.0e-61 241.1 270 51.1
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.0e-61 241.1 261 52.5
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.2e-61 240.0 258 53.1
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 5.0e-61 238.8 277 52.3
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 5.0e-61 238.8 258 53.1
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 8.5e-61 238.0 271 52.8
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.9e-60 236.9 261 54.0
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 2.7e-59 233.0 282 48.2
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 6.1e-59 231.9 261 52.5
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-58 229.9 261 52.1
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.0e-58 229.6 253 53.4
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 4.0e-58 229.2 265 52.1
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 4.0e-58 229.2 247 53.4
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 5.2e-58 228.8 233 54.1
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 6.7e-58 228.4 276 50.7
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 6.7e-58 228.4 261 51.7
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 6.7e-58 228.4 275 52.0
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.2e-57 227.6 258 51.6
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.6e-57 226.5 262 50.4
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.3e-57 226.1 261 51.7
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 4.4e-57 225.7 263 50.6
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 5.7e-57 225.3 259 50.6
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 7.5e-57 224.9 259 51.7
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 9.7e-57 224.6 266 50.4
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.3e-56 224.2 259 50.2
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 2.2e-56 223.4 219 55.7
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 8.2e-56 221.5 262 48.9
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 1.4e-55 220.7 263 51.3
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 2.4e-55 219.9 213 55.4
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.4e-55 219.9 234 53.0
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 4.1e-55 219.2 236 53.0
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 5.3e-55 218.8 259 50.2
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 9.1e-55 218.0 247 54.3
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 9.1e-55 218.0 269 51.7
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 9.1e-55 218.0 264 50.8
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.2e-54 217.6 269 46.8
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 1.6e-54 217.2 263 50.6
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 1.6e-54 217.2 270 50.0
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 2.7e-54 216.5 218 53.7
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 4.5e-54 215.7 251 52.2
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.9e-53 213.0 262 50.4
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 2.9e-53 213.0 218 54.1
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 3.8e-53 212.6 250 50.8
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 5.5e-52 208.8 256 50.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 7.2e-52 208.4 250 50.0
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 7.2e-52 208.4 238 51.7
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.1e-51 206.8 206 57.8
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 8.0e-51 204.9 251 48.2
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.3e-50 203.4 214 54.2
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.3e-50 203.4 214 54.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 4.0e-50 202.6 266 46.6
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 5.2e-50 202.2 260 48.5
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.2e-49 201.1 214 52.3
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.2e-49 201.1 208 58.2
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.5e-49 200.7 213 55.9
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 8.3e-48 194.9 252 47.2
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 1.1e-47 194.5 186 56.5
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 3.1e-47 193.0 230 51.3
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 3.1e-47 193.0 217 53.9
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 5.9e-46 188.7 259 45.2
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 8.6e-45 184.9 148 66.9
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.0e-42 177.9 206 53.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 5.2e-42 175.6 221 46.2
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 5.2e-42 175.6 248 47.2
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.3e-40 171.0 216 47.7
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.6e-38 164.1 206 46.6
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 4.5e-38 162.5 178 49.4
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 5.9e-38 162.2 188 47.9
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 7.8e-38 161.8 216 48.6
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.0e-37 161.4 215 50.2
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-37 161.0 213 48.8
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 6.6e-37 158.7 251 45.4
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 6.6e-37 158.7 251 45.4
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 5.6e-36 155.6 199 46.7
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 5.6e-36 155.6 244 43.0
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 5.6e-36 155.6 199 46.7
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 5.6e-36 155.6 255 42.7
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 4.7e-35 152.5 213 44.6
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.4e-34 151.0 224 44.6
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 2.3e-34 150.2 213 44.1
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 3.0e-34 149.8 216 45.4
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 4.0e-34 149.4 109 69.7
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 6.8e-34 148.7 348 35.6
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 2.6e-33 146.7 166 51.8
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 3.4e-33 146.4 257 41.2
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 1.3e-32 144.4 256 40.6
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 7.8e-30 135.2 87 78.2
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 6.8e-26 122.1 92 68.5
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 8.3e-24 115.2 211 38.4
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 6.0e-22 109.0 154 40.9
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 5.0e-21 105.9 185 36.8
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.5e-20 104.4 89 61.8
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 7.3e-20 102.1 205 36.1
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 4.7e-19 99.4 72 70.8
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 2.3e-18 97.1 157 42.0
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 5.2e-18 95.9 211 34.6
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.4e-17 93.2 102 49.0
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.3e-16 91.3 186 37.6
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 5.4e-15 85.9 48 93.8
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 9.2e-15 85.1 116 45.7
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 2.3e-13 80.5 116 48.3
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 5.1e-13 79.3 87 49.4
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 5.6e-12 75.9 63 60.3
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 8.1e-11 72.0 53 66.0


User provided reference genes

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