Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1645.9 865 100.0
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1196.0 888 70.2
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1183.7 888 68.6
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1118.2 814 68.9
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1106.7 813 67.4
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1101.7 820 67.2
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1101.3 817 67.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1097.0 816 65.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1097.0 823 66.0
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1096.3 816 65.0
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 814 67.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 881 63.5
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1094.7 824 68.0
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1092.8 818 64.7
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1090.9 811 66.3
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1090.9 818 67.7
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1089.3 819 65.9
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1089.3 812 68.1
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1088.9 818 67.2
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 871 64.6
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 811 65.6
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1086.6 883 61.8
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1085.5 818 67.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1080.9 817 68.1
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1080.1 806 66.6
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1079.3 823 66.6
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1076.6 817 66.6
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 5.9e-312 1073.5 878 64.1
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 4.1e-311 1071.2 808 65.8
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 2.0e-310 1068.9 811 66.1
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.6e-310 1068.5 890 60.7
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 5.9e-310 1067.4 817 65.9
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 7.6e-310 1067.0 817 66.1
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.1e-308 1063.1 815 64.3
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 1.9e-308 1062.4 814 66.2
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 4.2e-308 1061.2 820 63.9
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.8e-306 1055.8 810 63.3
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 2.3e-306 1055.4 823 63.9
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 3.9e-306 1054.7 884 60.5
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 1.5e-305 1052.7 817 64.4
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 5.7e-305 1050.8 819 63.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 7.4e-305 1050.4 814 64.1
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 7.4e-305 1050.4 814 63.4
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 7.4e-305 1050.4 744 70.0
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.2e-304 1048.9 817 65.6
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.4e-303 1046.2 813 65.1
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 3.1e-303 1045.0 822 63.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 9.0e-303 1043.5 819 64.0
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 1.2e-302 1043.1 826 62.1
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.1e-300 1036.6 845 62.2
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.4e-300 1036.2 826 64.4
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 1.9e-300 1035.8 862 58.8
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 3.2e-300 1035.0 803 64.3
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.2e-299 1033.1 814 61.8
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.6e-299 1032.7 783 65.1
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 2.7e-299 1031.9 812 63.5
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.8e-298 1029.2 814 61.7
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.8e-298 1029.2 901 59.8
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 2.3e-298 1028.9 820 62.3
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 5.7e-297 1024.2 907 59.2
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 7.4e-297 1023.8 862 60.3
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 7.4e-297 1023.8 811 62.9
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.1e-295 1020.0 818 65.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 1.8e-295 1019.2 878 58.7
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 3.1e-295 1018.5 794 65.0
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 3.1e-295 1018.5 816 63.0
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.7e-293 1012.7 877 58.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 8.5e-293 1010.4 878 58.9
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 2.5e-292 1008.8 884 57.8
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 9.4e-292 1006.9 822 61.4
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.2e-291 1006.5 816 61.5
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 1.6e-291 1006.1 811 63.4
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.7e-291 1005.4 774 64.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 3.6e-291 1005.0 820 61.3
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 3.6e-291 1005.0 820 61.3
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 4.7e-291 1004.6 820 61.8
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 1.0e-290 1003.4 860 58.6
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 3.3e-289 998.4 819 63.4
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 2.2e-288 995.7 915 58.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 4.1e-287 991.5 663 73.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 4.2e-284 981.5 828 60.1
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 7.2e-284 980.7 834 58.6
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.2e-284 980.7 815 58.9
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.2e-280 969.1 839 61.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 5.9e-278 961.1 803 59.7
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.5e-276 955.7 805 60.5
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 2.1e-275 952.6 641 71.9
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.7e-272 943.0 800 58.6
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.4e-271 939.1 736 61.5
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 2.2e-269 932.6 819 59.8
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 3.1e-263 912.1 708 64.7
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.5e-262 908.3 691 67.0
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 2.0e-254 882.9 673 64.9
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 7.3e-244 847.8 787 58.6
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.2e-243 847.0 645 65.3
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 4.9e-232 808.5 842 49.6
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 4.3e-228 795.4 841 48.2
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 1.1e-226 790.8 673 60.5
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.7e-224 783.5 828 50.2
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.1e-215 754.2 743 50.9
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.1e-204 717.6 727 53.9
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 8.8e-181 638.3 571 53.2
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 9.4e-175 618.2 465 66.5
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.2e-161 574.7 480 61.7
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 2.2e-152 543.9 744 41.8
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.8e-149 534.3 541 53.6
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.8e-146 524.2 757 40.3
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.1e-117 428.7 398 56.5
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.4e-115 419.5 309 66.7
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.4e-106 391.7 197 93.9
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 4.2e-106 390.2 188 97.9
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 9.3e-106 389.0 308 63.0
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.1e-105 387.9 186 98.4
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 1.1e-95 355.5 343 54.8
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.5e-92 345.1 228 93.4
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.8e-92 343.2 244 67.6
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.1e-90 336.3 246 67.1
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.7e-80 303.1 219 65.3
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 7.7e-68 263.1 416 36.1
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.3e-67 262.3 203 59.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.9e-42 178.7 147 55.1
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.6e-41 175.6 136 55.9
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 5.0e-35 154.1 86 86.0
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 5.6e-26 124.0 161 40.4
Aqoxy1G02496 Aquilegia oxysepala HOM05D000180 ORTHO05D000099 1.1e-13 83.2 49 98.0
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 9.5e-10 70.1 176 31.8
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.5e-07 62.8 109 36.7
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.6e-07 62.0 51 60.8


User provided reference genes

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