Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02427 Aquilegia oxysepala HOM05D007999 ORTHO05D000248 8.8e-66 253.4 125 100.0
TAR636G2047 Trochodendron aralioides HOM05D007999 ORTHO05D000248 4.9e-24 114.8 113 56.6
TAR267G0002 Trochodendron aralioides HOM05D007999 ORTHO05D000248 1.1e-23 113.6 113 56.6
Manes.09G117900 Manihot esculenta HOM05D007999 ORTHO05D000248 6.4e-16 87.8 110 49.1
Psat7g234760 Pisum sativum HOM05D007999 ORTHO05D000248 2.1e-14 82.8 117 47.9
Oeu060433.1 Olea europaea HOM05D007999 ORTHO05D000248 2.7e-14 82.4 117 46.2
Gohir.A03G087400 Gossypium hirsutum HOM05D007999 ORTHO05D000248 3.5e-14 82.0 112 45.5
Gohir.D02G108100 Gossypium hirsutum HOM05D007999 ORTHO05D000248 3.5e-14 82.0 112 45.5
Nn2g10298 Nelumbo nucifera HOM05D007999 ORTHO05D000248 6.0e-14 81.3 115 48.7
Gorai.005G122700 Gossypium raimondii HOM05D007999 ORTHO05D000248 1.0e-13 80.5 112 44.6
CiPaw.09G221400 Carya illinoinensis HOM05D007999 ORTHO05D000248 2.3e-13 79.3 115 47.0
Hma1.2p1_0537F.1_g174340 Hydrangea macrophylla HOM05D007999 ORTHO05D000248 2.3e-13 79.3 112 45.5
Migut.J00037 Erythranthe guttata HOM05D007999 ORTHO05D000248 6.6e-13 77.8 124 41.1
Lalb_Chr07g0190371 Lupinus albus HOM05D007999 ORTHO05D000248 6.6e-13 77.8 112 46.4
Thecc.04G151500 Theobroma cacao HOM05D007999 ORTHO05D000248 6.6e-13 77.8 106 44.3
Phvul.010G070300 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 1.5e-12 76.6 121 40.5
Rhsim05G0230600 Rhododendron simsii HOM05D007999 ORTHO05D000248 1.5e-12 76.6 114 46.5
FvH4_6g09860 Fragaria vesca HOM05D007999 ORTHO05D000248 1.9e-12 76.3 121 43.8
Medtr4g028110 Medicago truncatula HOM05D007999 ORTHO05D000248 1.9e-12 76.3 115 47.0
Sp5g05490 Schrenkiella parvula HOM05D007999 ORTHO05D000248 2.5e-12 75.9 126 40.5
Ca_26988_v3 Cicer arietinum L. HOM05D007999 ORTHO05D000248 4.3e-12 75.1 112 43.8
Lsat_1_v5_gn_8_107720 Lactuca sativa HOM05D007999 ORTHO05D000248 4.3e-12 75.1 128 40.6
Glyma.03G034300 Glycine max HOM05D007999 ORTHO05D000248 5.6e-12 74.7 119 40.3
Actinidia11508 Actinidia chinensis HOM05D007999 ORTHO05D000248 7.3e-12 74.3 111 43.2
Lj3g0012389 Lotus japonicus HOM05D007999 ORTHO05D000248 7.3e-12 74.3 115 45.2
Nitab4.5_0000048g0020 Nicotiana tabacum HOM05D007999 ORTHO05D000248 9.5e-12 73.9 121 44.6
FAN02G1196 Fragaria x ananassa HOM05D007999 ORTHO05D000248 1.2e-11 73.6 122 42.6
ClCG10G022740 Citrullus lanatus HOM05D007999 ORTHO05D000248 2.1e-11 72.8 120 42.5
Glyma.01G133200 Glycine max HOM05D007999 ORTHO05D000248 2.1e-11 72.8 120 40.8
MSTRG.5499 Avicennia marina HOM05D007999 ORTHO05D000248 2.8e-11 72.4 118 40.7
QL07p032111 Quercus lobata HOM05D007999 ORTHO05D000248 3.6e-11 72.0 116 41.4
Haze_21176 Corylus avellana HOM05D007999 ORTHO05D000248 8.1e-11 70.9 118 38.1
Cfa017033 Carpinus fangiana HOM05D007999 ORTHO05D000248 1.1e-10 70.5 118 38.1
TPR.G14122 Trifolium pratense HOM05D007999 ORTHO05D000248 1.4e-10 70.1 120 40.8
Potri.016G136800 Populus trichocarpa HOM05D007999 ORTHO05D000248 1.8e-10 69.7 122 39.3
Nitab4.5_0004433g0050 Nicotiana tabacum HOM05D007999 ORTHO05D000248 3.1e-10 68.9 118 40.7
Medtr7g073270 Medicago truncatula HOM05D007999 ORTHO05D000248 4.0e-10 68.6 116 39.7
TPR.G5017 Trifolium pratense HOM05D007999 ORTHO05D000248 4.0e-10 68.6 114 42.1
VMungo0331G0380 Vigna mungo HOM05D007999 ORTHO05D000248 4.0e-10 68.6 120 37.5
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 8.9e-10 67.4 87 48.3
Prupe.6G293700 Prunus persica HOM05D007999 ORTHO05D000248 8.9e-10 67.4 113 38.9
Thhalv10006368m.g Eutrema salsugineum HOM05D007999 ORTHO05D000248 1.2e-09 67.0 127 37.0
RcHm_v2.0_Chr3g0460461 Rosa chinensis HOM05D007999 ORTHO05D000248 1.5e-09 66.6 114 39.5
Sabra04G0153500 Salix brachista HOM05D007999 ORTHO05D000248 1.5e-09 66.6 119 37.0
PGSC0003DMG400031466 Solanum tuberosum HOM05D007999 ORTHO05D000248 1.5e-09 66.6 117 38.5
Ciclev10013035m.g Citrus clementina HOM05D007999 ORTHO05D000248 3.4e-09 65.5 98 45.9
Dinv25344 Davidia involucrata HOM05D007999 ORTHO05D000248 3.4e-09 65.5 86 46.5
Solyc09g042230.2 Solanum lycopersicum HOM05D007999 ORTHO05D000248 3.4e-09 65.5 118 38.1
Sopen09g015370 Solanum pennellii HOM05D007999 ORTHO05D000248 3.4e-09 65.5 108 39.8
Phvul.008G082700 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 5.8e-09 64.7 114 41.2
Gohir.A10G150800 Gossypium hirsutum HOM05D007999 ORTHO05D000248 7.5e-09 64.3 105 40.0
Gohir.D10G115500 Gossypium hirsutum HOM05D007999 ORTHO05D000248 7.5e-09 64.3 105 40.0
Gorai.011G127200 Gossypium raimondii HOM05D007999 ORTHO05D000248 7.5e-09 64.3 105 40.0
SGA_v2.0_scaffold373G50183 Striga asiatica HOM05D007999 ORTHO05D000248 7.5e-09 64.3 116 39.7
MBI03_g22788_MAGBIO Magnolia biondii HOM05D007999 ORTHO05D000248 9.9e-09 63.9 103 41.7
Psat3g118800 Pisum sativum HOM05D007999 ORTHO05D000248 9.9e-09 63.9 115 39.1
Cpa.g.sc86.58 Carica papaya HOM05D007999 ORTHO05D000248 1.3e-08 63.5 111 38.7
Sc20g0006970 Simmondsia chinensis HOM05D007999 ORTHO05D000248 1.3e-08 63.5 105 39.0
Atru.chr8.114 Acer truncatum HOM05D007999 ORTHO05D000248 1.7e-08 63.2 133 38.3
Ah.08g209300 Amaranthus hybridus HOM05D007999 ORTHO05D000248 1.7e-08 63.2 118 35.6
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 1.7e-08 63.2 120 38.3
SalBow8G1753 Salvia bowleyana HOM05D007999 ORTHO05D000248 2.2e-08 62.8 107 39.3
VMungo1383G2835 Vigna mungo HOM05D007999 ORTHO05D000248 2.9e-08 62.4 111 39.6
A09p50020 Brassica napus HOM05D002367 ORTHO05D009515 6.4e-08 61.2 122 40.2
BraA09t40452Z Brassica rapa HOM05D007999 ORTHO05D000248 6.4e-08 61.2 122 40.2
Carub.0005s2390 Capsella rubella HOM05D007999 ORTHO05D000248 8.3e-08 60.8 130 35.4
Sed0006729 Sechium edule HOM05D007999 ORTHO05D000248 8.3e-08 60.8 125 34.4
BcaC07g40025 Brassica carinata HOM05D007585 ORTHO05D009515 1.1e-07 60.5 120 40.0
C08p32430 Brassica napus HOM05D002367 ORTHO05D009515 1.1e-07 60.5 120 40.0
BolC8t50857H Brassica oleracea HOM05D007999 ORTHO05D000248 1.1e-07 60.5 120 40.0
BcaC07g40047 Brassica carinata HOM05D007585 ORTHO05D009515 1.4e-07 60.1 121 37.2
BcaC07g40077 Brassica carinata HOM05D007585 ORTHO05D009515 1.4e-07 60.1 121 37.2
ECA236G4781 Erigeron canadensis HOM05D007999 ORTHO05D000248 3.2e-07 58.9 59 52.5
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 7.1e-07 57.8 80 42.5
Lalb_Chr03g0043771 Lupinus albus HOM05D007999 ORTHO05D000248 7.1e-07 57.8 117 35.0
Peaxi162Scf00732g00333 Petunia axillaris HOM05D007999 ORTHO05D000248 7.1e-07 57.8 88 43.2
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 1.2e-06 57.0 33 78.8
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 4.6e-06 55.1 106 39.6


User provided reference genes

Program Settings