Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 9.7e-161 570.1 286 100.0
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 5.0e-48 195.7 112 86.6
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 4.6e-46 189.1 111 86.5
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 3.3e-44 183.0 112 77.7
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 5.7e-44 182.2 109 78.9
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 7.4e-44 181.8 112 76.8
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 7.4e-44 181.8 112 76.8
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 1.3e-43 181.0 112 76.8
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.3e-43 181.0 109 79.8
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.3e-43 181.0 112 77.7
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.7e-43 180.6 112 75.9
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.7e-43 180.6 112 75.9
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.7e-43 180.6 112 78.6
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.7e-43 180.6 112 78.6
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 1.7e-43 180.6 112 76.8
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 1.7e-43 180.6 109 79.8
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 2.2e-43 180.3 112 77.7
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 2.2e-43 180.3 112 77.7
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 2.2e-43 180.3 112 75.9
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 2.8e-43 179.9 112 77.7
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 4.8e-43 179.1 112 75.9
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 4.8e-43 179.1 112 75.9
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 4.8e-43 179.1 112 75.9
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 4.8e-43 179.1 112 76.8
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 8.2e-43 178.3 112 75.9
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 8.2e-43 178.3 112 75.0
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.1e-42 177.9 112 78.6
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.4e-42 177.6 109 78.0
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.4e-42 177.6 112 75.9
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.4e-42 177.6 112 74.1
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 1.8e-42 177.2 112 75.9
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 3.1e-42 176.4 112 75.0
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 3.1e-42 176.4 112 75.0
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 4.1e-42 176.0 112 75.0
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 4.1e-42 176.0 112 75.0
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 6.9e-42 175.3 112 74.1
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 9.1e-42 174.9 158 60.8
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 9.1e-42 174.9 112 73.2
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 9.1e-42 174.9 112 73.2
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.5e-41 174.1 115 72.2
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 1.5e-41 174.1 112 74.1
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 3.4e-41 172.9 112 72.3
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 3.4e-41 172.9 112 72.3
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 5.9e-41 172.2 112 71.4
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 5.9e-41 172.2 112 74.1
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 5.9e-41 172.2 112 73.2
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 7.7e-41 171.8 109 74.3
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 7.7e-41 171.8 109 74.3
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 7.7e-41 171.8 112 75.0
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 1.0e-40 171.4 112 70.5
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.3e-40 171.0 112 71.4
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.3e-40 171.0 109 77.1
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 1.3e-40 171.0 109 73.4
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 1.7e-40 170.6 94 80.9
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 1.7e-40 170.6 112 71.4
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.2e-40 170.2 109 73.4
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 2.2e-40 170.2 109 73.4
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 2.2e-40 170.2 109 73.4
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 2.9e-40 169.9 112 71.4
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 2.9e-40 169.9 166 56.0
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.9e-40 169.9 112 70.5
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.8e-40 169.5 109 77.1
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 3.8e-40 169.5 94 81.9
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.8e-40 169.5 112 75.0
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 1.1e-39 167.9 135 60.0
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.1e-39 167.9 114 73.7
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 1.4e-39 167.5 117 67.5
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.4e-39 167.5 112 73.2
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.9e-39 167.2 158 59.5
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 1.9e-39 167.2 109 77.1
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 3.2e-39 166.4 112 69.6
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 4.2e-39 166.0 109 76.1
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 5.5e-39 165.6 112 70.5
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 5.5e-39 165.6 112 70.5
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 7.2e-39 165.2 116 71.6
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 1.2e-38 164.5 112 71.4
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 1.2e-38 164.5 112 71.4
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 1.6e-38 164.1 112 72.3
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 2.1e-38 163.7 112 70.5
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 4.7e-38 162.5 112 71.4
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 6.1e-38 162.2 112 68.8
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 1.0e-37 161.4 112 67.9
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.0e-37 161.4 112 70.5
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 1.0e-37 161.4 112 68.8
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-37 161.0 112 69.6
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-37 161.0 112 69.6
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 2.3e-37 160.2 112 68.8
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 5.2e-37 159.1 109 70.6
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 6.7e-37 158.7 115 71.3
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 8.8e-37 158.3 171 52.0
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 8.8e-37 158.3 112 67.0
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 1.5e-36 157.5 115 66.1
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 2.0e-36 157.1 112 69.6
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.0e-36 157.1 109 71.6
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 3.3e-36 156.4 112 68.8
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.3e-36 156.4 112 67.9
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 3.3e-36 156.4 112 62.5
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 3.3e-36 156.4 112 62.5
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 5.7e-36 155.6 112 67.0
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.4e-36 155.2 112 67.0
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 1.3e-35 154.5 112 65.2
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.7e-35 154.1 167 55.7
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 2.8e-35 153.3 167 55.1
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 2.8e-35 153.3 130 58.5
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 2.8e-35 153.3 88 77.3
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.8e-35 153.3 154 57.8
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 4.8e-35 152.5 109 66.1
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 6.3e-35 152.1 167 55.1
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 8.2e-35 151.8 167 54.5
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 8.2e-35 151.8 112 63.4
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.1e-34 151.4 112 64.3
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.1e-34 151.4 146 54.1
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 3.1e-34 149.8 112 61.6
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 9.1e-34 148.3 112 62.5
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.6e-33 146.7 112 60.7
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.3e-32 144.4 112 61.6
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.9e-32 143.3 112 61.6
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 1.2e-30 137.9 112 58.0
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.6e-30 137.5 112 58.9
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 2.7e-30 136.7 112 58.9
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 2.7e-30 136.7 112 58.9
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 2.7e-30 136.7 112 58.9
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 3.6e-30 136.3 126 63.5
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 3.6e-30 136.3 112 58.9
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.4e-29 134.4 112 57.1
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 2.3e-29 133.7 112 56.2
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 8.8e-29 131.7 112 56.2
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 1.2e-28 131.3 112 57.1
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.5e-28 131.0 112 57.1
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 9.7e-28 128.3 127 52.0
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 1.3e-27 127.9 112 52.7
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.7e-27 127.5 112 56.2
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 1.4e-26 124.4 123 51.2
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 9.1e-26 121.7 84 72.6
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 7.7e-25 118.6 112 58.9
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 7.7e-25 118.6 112 58.9
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 7.7e-25 118.6 112 58.9
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 7.7e-25 118.6 112 58.9
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 1.2e-22 111.3 57 80.7
Aqoxy5G02163 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-22 110.2 62 96.8
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 5.2e-21 105.9 64 71.9
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 6.1e-14 82.4 105 51.4
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.2e-11 73.9 94 46.8
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.4e-10 71.2 55 70.9
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 5.4e-10 69.3 56 67.9
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 5.4e-10 69.3 56 66.1
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.2e-09 68.2 74 51.4
Nn2g10438 Nelumbo nucifera HOM05D004206 ORTHO05D003325 2.7e-09 67.0 51 70.6
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 5.9e-09 65.9 88 39.8
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 7.8e-09 65.5 115 35.7
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.3e-08 64.7 101 40.6
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.3e-08 63.9 80 47.5
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.1e-07 61.6 72 47.2
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 1.5e-07 61.2 63 38.1
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 7.3e-07 58.9 78 51.3
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.6e-06 57.8 80 48.8
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.6e-06 57.8 68 54.4
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.8e-06 57.0 80 45.0
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.8e-06 57.0 80 45.0
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 2.8e-06 57.0 76 47.4
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 3.6e-06 56.6 102 40.2
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 3.6e-06 56.6 65 50.8
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 4.7e-06 56.2 82 46.3
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 8.0e-06 55.5 29 79.3
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 8.0e-06 55.5 82 47.6


User provided reference genes

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