Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02408 Aquilegia oxysepala HOM05D001834 ORTHO05D001762 1.6e-56 222.6 117 100.0
Aqoxy1G01473 Aquilegia oxysepala HOM05D001834 ORTHO05D001762 6.0e-24 114.4 98 70.4
Nn7g38078 Nelumbo nucifera HOM05D001834 ORTHO05D001762 1.5e-11 73.2 78 57.7
TAR623G1328 Trochodendron aralioides HOM05D001834 ORTHO05D001762 1.4e-09 66.6 78 48.7
Sed0005641 Sechium edule HOM05D001834 ORTHO05D001762 7.1e-09 64.3 92 44.6
SEGI_04608 Sequoiadendron giganteum HOM05D001834 ORTHO05D001762 7.1e-09 64.3 93 43.0
ClCG11G004810 Citrullus lanatus HOM05D001834 ORTHO05D001762 1.2e-08 63.5 96 42.7
ATR0561G192 Amborella trichopoda HOM05D001834 ORTHO05D001762 4.6e-08 61.6 71 49.3
AUR62018197 Chenopodium quinoa HOM05D001834 ORTHO05D001762 4.6e-08 61.6 86 39.5
Hma1.2p1_0481F.1_g162300 Hydrangea macrophylla HOM05D001834 ORTHO05D001762 6.0e-08 61.2 96 36.5
SalBow7G1480 Salvia bowleyana HOM05D001834 ORTHO05D001762 6.0e-08 61.2 86 40.7
Sc19g0004450 Simmondsia chinensis HOM05D001834 ORTHO05D001762 6.0e-08 61.2 84 45.2
MELO3C022035.2 Cucumis melo HOM05D001834 ORTHO05D001762 1.0e-07 60.5 96 41.7
CsaV3_5G038530 Cucumis sativus L. HOM05D001834 ORTHO05D001762 1.0e-07 60.5 96 41.7
Sed0004520 Sechium edule HOM05D001834 ORTHO05D001762 1.0e-07 60.5 82 43.9
GSVIVG01032913001 Vitis vinifera HOM05D001834 ORTHO05D001762 1.3e-07 60.1 91 40.7
AUR62038684 Chenopodium quinoa HOM05D001834 ORTHO05D001762 1.7e-07 59.7 86 38.4
VMungo0647G0963 Vigna mungo HOM05D001834 ORTHO05D001762 1.7e-07 59.7 73 42.5
Dinv33835 Davidia involucrata HOM05D001834 ORTHO05D001762 3.0e-07 58.9 80 41.2
Lsat_1_v5_gn_3_22641 Lactuca sativa HOM05D001834 ORTHO05D001762 3.0e-07 58.9 65 41.5
Cc06_g04190 Coffea canephora HOM05D001834 ORTHO05D001762 3.9e-07 58.5 73 46.6
FAN02G2948 Fragaria x ananassa HOM05D001834 ORTHO05D001762 3.9e-07 58.5 94 35.1
Medtr7g015100 Medicago truncatula HOM05D001834 ORTHO05D001762 3.9e-07 58.5 73 42.5
SGA_v2.0_scaffold154G37117 Striga asiatica HOM05D001834 ORTHO05D001762 3.9e-07 58.5 97 37.1
ECA246G2967 Erigeron canadensis HOM05D001834 ORTHO05D001762 5.1e-07 58.2 91 39.6
HanXRQChr06g0165421 Helianthus annuus HOM05D001834 ORTHO05D001762 5.1e-07 58.2 92 35.9
FvH4_6g46720 Fragaria vesca HOM05D001834 ORTHO05D001762 6.6e-07 57.8 94 34.0
Rhsim03G0155300 Rhododendron simsii HOM05D001834 ORTHO05D001762 6.6e-07 57.8 72 44.4
Dinv34935 Davidia involucrata HOM05D001834 ORTHO05D001762 8.6e-07 57.4 80 40.0
FAN05G2171 Fragaria x ananassa HOM05D001834 ORTHO05D001762 8.6e-07 57.4 93 34.4
Glyma.18G268800 Glycine max HOM05D001834 ORTHO05D001762 8.6e-07 57.4 73 43.8
TAR371G0129 Trochodendron aralioides HOM05D001834 ORTHO05D001762 8.6e-07 57.4 94 42.6
Ca_14460_v3 Cicer arietinum L. HOM05D001834 ORTHO05D001762 1.1e-06 57.0 101 35.6
Ca_16288_v3 Cicer arietinum L. HOM05D001834 ORTHO05D001762 1.1e-06 57.0 101 35.6
Glyma.08G247400 Glycine max HOM05D001834 ORTHO05D001762 1.1e-06 57.0 73 43.8
Oeu004414.1 Olea europaea HOM05D001834 ORTHO05D001762 1.1e-06 57.0 94 37.2
Potri.015G118200 Populus trichocarpa HOM05D001834 ORTHO05D001762 1.1e-06 57.0 69 44.9
CSS0039222 Camellia sinensis var. sinensis HOM05D001834 ORTHO05D001762 1.5e-06 56.6 98 37.8
Cpa.g.sc135.35 Carica papaya HOM05D001834 ORTHO05D001762 1.9e-06 56.2 93 36.6
Dinv35785 Davidia involucrata HOM05D001834 ORTHO05D001762 2.5e-06 55.8 80 41.2
ECA246G2310 Erigeron canadensis HOM05D001834 ORTHO05D001762 2.5e-06 55.8 91 35.2
MBI19_g13320_MAGBIO Magnolia biondii HOM05D001834 ORTHO05D001762 2.5e-06 55.8 74 43.2
Nitab4.5_0002632g0040 Nicotiana tabacum HOM05D001834 ORTHO05D001762 2.5e-06 55.8 69 46.4
Haze_14420 Corylus avellana HOM05D001834 ORTHO05D001762 3.3e-06 55.5 93 38.7
Eucgr.D01039 Eucalyptus grandis HOM05D001834 ORTHO05D001762 3.3e-06 55.5 90 34.4
Gohir.A10G045200 Gossypium hirsutum HOM05D001834 ORTHO05D001762 3.3e-06 55.5 70 40.0
MBI05_g34366_MAGBIO Magnolia biondii HOM05D001834 ORTHO05D001762 3.3e-06 55.5 75 42.7
MD09G1068300 Malus domestica HOM05D001834 ORTHO05D001762 3.3e-06 55.5 97 34.0
Manes.16G059100 Manihot esculenta HOM05D001834 ORTHO05D001762 3.3e-06 55.5 96 36.5
Nitab4.5_0000578g0150 Nicotiana tabacum HOM05D001834 ORTHO05D001762 3.3e-06 55.5 69 46.4
Phvul.008G031660 Phaseolus vulgaris HOM05D001834 ORTHO05D001762 3.3e-06 55.5 73 45.2
VMungo1383G0369 Vigna mungo HOM05D001834 ORTHO05D001762 3.3e-06 55.5 73 42.5
Duzib235G0613 Durio zibethinus HOM05D001834 ORTHO05D001762 4.3e-06 55.1 97 37.1
QL11p018119 Quercus lobata HOM05D001834 ORTHO05D001762 4.3e-06 55.1 76 38.2
arahy.Tifrunner.gnm1.ann1.D71JW8 Arachis hypogaea HOM05D001834 ORTHO05D001762 5.6e-06 54.7 100 35.0
MSTRG.15445 Avicennia marina HOM05D001834 ORTHO05D001762 5.6e-06 54.7 93 35.5
Ca_13743_v3 Cicer arietinum L. HOM05D001834 ORTHO05D001762 5.6e-06 54.7 96 36.5
PSO541G2515 Papaver somniferum HOM05D001834 ORTHO05D001762 5.6e-06 54.7 95 40.0
PSO675G0600 Papaver somniferum HOM05D001834 ORTHO05D001762 5.6e-06 54.7 95 40.0
MSTRG.3360 Avicennia marina HOM05D001834 ORTHO05D001762 7.3e-06 54.3 97 32.0
Eucgr.A01685 Eucalyptus grandis HOM05D001834 ORTHO05D001762 7.3e-06 54.3 73 38.4
SGA_v2.0_scaffold148G36419 Striga asiatica HOM05D001834 ORTHO05D001762 7.3e-06 54.3 89 34.8
CSS0031272 Camellia sinensis var. sinensis HOM05D001834 ORTHO05D001762 9.5e-06 53.9 97 37.1
Dinv37312 Davidia involucrata HOM05D001834 ORTHO05D001762 9.5e-06 53.9 96 36.5
ECA232G2623 Erigeron canadensis HOM05D001834 ORTHO05D001762 9.5e-06 53.9 70 40.0
HanXRQChr15g0488891 Helianthus annuus HOM05D001834 ORTHO05D001762 9.5e-06 53.9 95 37.9
Lsat_1_v5_gn_4_172000 Lactuca sativa HOM05D001834 ORTHO05D001762 9.5e-06 53.9 92 37.0
Psat5g111280 Pisum sativum HOM05D001834 ORTHO05D001762 9.5e-06 53.9 101 34.7
TPR.G29039 Trifolium pratense HOM05D000005 ORTHO05D000012 9.5e-06 53.9 99 33.3


User provided reference genes

Program Settings