Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 4.8e-101 371.3 206 100.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 6.7e-63 244.6 205 63.9
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 9.4e-57 224.2 202 57.4
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 3.0e-55 219.2 205 58.5
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 3.9e-55 218.8 203 63.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 7.4e-54 214.5 161 68.3
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 2.2e-53 213.0 194 61.3
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-52 209.9 202 62.9
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 3.1e-52 209.1 168 66.1
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 4.1e-52 208.8 164 64.6
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.0e-51 206.5 202 62.9
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 2.0e-51 206.5 164 64.0
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 4.5e-51 205.3 202 60.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 7.7e-51 204.5 171 62.0
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.0e-50 204.1 196 60.2
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.7e-50 203.4 203 61.1
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.2e-50 203.0 162 64.2
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 3.8e-50 202.2 210 54.3
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 6.5e-50 201.4 196 62.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 6.5e-50 201.4 163 63.8
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.9e-49 199.9 194 56.2
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.9e-49 199.9 159 62.3
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.2e-49 199.1 156 67.9
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.2e-49 198.7 207 56.0
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 4.2e-49 198.7 207 56.0
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 5.5e-49 198.4 163 62.6
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 7.2e-49 198.0 161 68.3
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 9.4e-49 197.6 164 61.6
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.2e-48 197.2 155 69.0
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.6e-48 196.8 164 62.8
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.6e-48 196.8 209 56.5
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.6e-48 196.8 178 62.9
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.6e-48 196.8 195 57.4
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 2.7e-48 196.1 181 64.1
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.6e-48 195.7 162 62.3
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.7e-48 195.3 164 63.4
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 4.7e-48 195.3 163 65.0
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 8.0e-48 194.5 164 61.0
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.4e-47 193.7 178 59.6
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.4e-47 193.7 155 63.2
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 2.3e-47 193.0 192 59.9
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.0e-47 192.6 118 73.7
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.0e-47 192.6 203 55.7
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.0e-47 192.6 185 54.6
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 4.0e-47 192.2 159 62.3
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.2e-47 191.8 164 61.0
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 5.2e-47 191.8 223 52.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.2e-47 191.8 168 67.9
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.2e-47 191.8 179 62.6
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 6.7e-47 191.4 117 76.9
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.3e-46 189.1 181 62.4
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 4.4e-46 188.7 135 68.1
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.5e-46 188.0 162 66.0
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.5e-46 188.0 171 63.2
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 9.7e-46 187.6 199 54.3
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 9.7e-46 187.6 192 54.2
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.3e-45 187.2 160 67.5
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.8e-45 185.3 176 59.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 6.3e-45 184.9 197 54.3
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.1e-44 184.1 160 65.0
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 5.3e-44 181.8 158 68.4
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 7.0e-44 181.4 174 59.2
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.0e-44 181.4 108 78.7
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.2e-43 180.6 192 54.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 2.7e-43 179.5 196 58.2
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.7e-43 179.5 202 50.5
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.7e-43 179.5 166 63.3
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 4.5e-43 178.7 219 48.4
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 5.9e-43 178.3 197 58.4
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.7e-43 177.9 157 66.9
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.0e-42 177.6 157 65.0
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 2.2e-42 176.4 206 54.9
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 2.9e-42 176.0 189 57.7
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 3.8e-42 175.6 174 58.0
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 3.8e-42 175.6 205 54.6
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 3.8e-42 175.6 174 50.6
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 8.5e-42 174.5 111 70.3
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 4.2e-41 172.2 174 51.7
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 4.2e-41 172.2 197 56.9
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 5.5e-41 171.8 155 60.6
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.6e-40 170.2 158 57.0
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.6e-40 170.2 153 57.5
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 2.1e-40 169.9 109 73.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.7e-40 169.5 206 53.4
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 6.1e-40 168.3 156 53.8
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.4e-39 167.2 162 54.9
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.4e-39 167.2 162 54.9
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.4e-39 167.2 153 54.2
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.4e-39 167.2 158 55.1
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 3.0e-39 166.0 153 55.6
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 5.2e-39 165.2 162 54.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 5.2e-39 165.2 162 54.3
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 2.0e-38 163.3 162 53.7
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.4e-38 162.5 118 66.1
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.3e-37 160.6 118 66.1
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 2.2e-37 159.8 162 51.9
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.7e-37 159.1 106 64.2
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.4e-36 157.1 119 62.2
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.8e-36 156.8 199 49.7
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.8e-36 156.8 149 60.4
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.8e-34 149.1 162 56.8
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 4.2e-33 145.6 106 65.1
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 9.5e-33 144.4 167 57.5
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.7e-32 142.1 167 50.3
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.3e-31 139.8 117 59.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 4.0e-31 139.0 114 56.1
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 6.8e-31 138.3 88 70.5
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 6.8e-31 138.3 118 59.3
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 9.2e-28 127.9 110 54.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 5.0e-26 122.1 108 51.9
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 8.6e-26 121.3 101 54.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 4.9e-21 105.5 118 51.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.3e-17 91.7 109 56.9
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 2.1e-16 90.1 72 55.6
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.0e-10 69.7 136 40.4
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.9e-10 69.3 111 48.6
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 3.6e-08 62.8 76 47.4
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 9.9e-06 54.7 38 63.2


User provided reference genes

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