Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02302 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 6.4e-146 520.8 273 100.0
Aqoxy1G02137 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 2.7e-112 409.1 235 91.9
PSO675G1484 Papaver somniferum HOM05D000513 ORTHO05D005786 8.3e-85 317.8 235 66.0
PSO541G4629 Papaver somniferum HOM05D000513 ORTHO05D005786 1.3e-82 310.5 235 64.7
TAR627G1077 Trochodendron aralioides HOM05D000513 ORTHO05D005786 1.3e-82 310.5 234 65.8
Lj1C1231T2 Lonicera japonica HOM05D000513 ORTHO05D005786 1.1e-81 307.4 234 64.1
Prupe.4G020100 Prunus persica HOM05D000513 ORTHO05D005786 1.2e-80 303.9 235 61.3
FvH4_3g02040 Fragaria vesca HOM05D000513 ORTHO05D005786 2.8e-80 302.8 234 63.7
Ca_00662_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005786 1.0e-79 300.8 233 61.8
Sabra04G0007000 Salix brachista HOM05D000513 ORTHO05D005786 1.0e-79 300.8 243 60.1
Rhsim13G0153900 Rhododendron simsii HOM05D000513 ORTHO05D005786 1.8e-79 300.1 233 67.4
Psat1g180640 Pisum sativum HOM05D000513 ORTHO05D005786 2.3e-79 299.7 233 62.2
Dinv20054 Davidia involucrata HOM05D000513 ORTHO05D005786 4.0e-79 298.9 234 62.4
Nn1g07138 Nelumbo nucifera HOM05D000513 ORTHO05D005786 5.2e-79 298.5 233 66.1
MBI02_g05872_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D005786 6.8e-79 298.1 234 62.8
Cfa000217 Carpinus fangiana HOM05D000513 ORTHO05D005786 8.9e-79 297.7 234 62.0
Lj1g0022645 Lotus japonicus HOM05D000513 ORTHO05D005786 8.9e-79 297.7 233 61.8
Haze_06803 Corylus avellana HOM05D000513 ORTHO05D005786 2.0e-78 296.6 236 62.7
FAN21G2967 Fragaria x ananassa HOM05D000513 ORTHO05D005786 4.4e-78 295.4 234 68.4
Cpa.g.sc152.17 Carica papaya HOM05D000513 ORTHO05D005786 5.7e-78 295.0 234 63.2
CSS0023626 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005786 9.8e-78 294.3 234 60.7
TAR629G0438 Trochodendron aralioides HOM05D000513 ORTHO05D005786 1.7e-77 293.5 234 62.0
TPR.G9945 Trifolium pratense HOM05D000513 ORTHO05D005786 2.8e-77 292.7 233 65.7
Gorai.011G013800 Gossypium raimondii HOM05D000513 ORTHO05D005786 3.7e-77 292.4 234 59.4
CANSAT78G1563 Cannabis sativa HOM05D000513 ORTHO05D005786 6.3e-77 291.6 234 65.4
CiPaw.10G071400 Carya illinoinensis HOM05D000513 ORTHO05D005786 8.3e-77 291.2 233 66.1
Gohir.D10G012300 Gossypium hirsutum HOM05D000513 ORTHO05D005786 8.3e-77 291.2 234 59.4
Manes.16G006900 Manihot esculenta HOM05D000513 ORTHO05D005786 1.1e-76 290.8 234 63.7
Gohir.A10G012640 Gossypium hirsutum HOM05D000513 ORTHO05D005786 1.4e-76 290.4 234 59.4
VMungo0540G1206 Vigna mungo HOM05D000513 ORTHO05D005786 1.4e-76 290.4 233 61.8
Potri.004G014100 Populus trichocarpa HOM05D000513 ORTHO05D005786 2.4e-76 289.7 235 64.3
Phvul.006G149680 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 3.2e-76 289.3 233 62.2
COL.COLO4_31779 Corchorus olitorius HOM05D000513 ORTHO05D005786 4.1e-76 288.9 234 60.7
Glyma.13G204700 Glycine max HOM05D000513 ORTHO05D005786 5.4e-76 288.5 233 62.7
Hma1.2p1_0749F.1_g212600 Hydrangea macrophylla HOM05D000513 ORTHO05D005786 1.6e-75 287.0 234 59.4
Lalb_Chr15g0087621 Lupinus albus HOM05D000513 ORTHO05D005786 1.6e-75 287.0 233 60.5
Glyma.15G108000 Glycine max HOM05D000513 ORTHO05D005786 2.0e-75 286.6 233 60.9
Medtr2g023320 Medicago truncatula HOM05D000513 ORTHO05D005786 2.7e-75 286.2 233 65.7
PGR004G0078 Punica granatum HOM05D000513 ORTHO05D005786 2.7e-75 286.2 235 60.4
Dinv13896 Davidia involucrata HOM05D000513 ORTHO05D005786 4.5e-75 285.4 234 64.1
QL05p073090 Quercus lobata HOM05D000513 ORTHO05D005786 4.5e-75 285.4 234 64.5
Sed0027566 Sechium edule HOM05D000513 ORTHO05D005786 4.5e-75 285.4 232 59.9
Duzib235G0182 Durio zibethinus HOM05D000513 ORTHO05D005786 5.9e-75 285.0 234 58.1
Eucgr.D01324 Eucalyptus grandis HOM05D000513 ORTHO05D005786 1.3e-74 283.9 233 57.9
FAN25G0071 Fragaria x ananassa HOM05D000513 ORTHO05D005786 1.3e-74 283.9 234 64.1
Lj6g0028016 Lotus japonicus HOM05D000513 ORTHO05D005786 2.9e-74 282.7 233 59.2
RcHm_v2.0_Chr5g0002941 Rosa chinensis HOM05D000513 ORTHO05D005786 2.9e-74 282.7 234 64.1
arahy.Tifrunner.gnm1.ann1.J4P8M7 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.1e-73 280.8 232 57.3
TWI38G1833 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 1.1e-73 280.8 233 63.9
Actinidia05513 Actinidia chinensis HOM05D000513 ORTHO05D005786 1.5e-73 280.4 236 59.3
Thecc.06G220800 Theobroma cacao HOM05D000513 ORTHO05D005786 1.5e-73 280.4 234 60.3
Actinidia26912 Actinidia chinensis HOM05D000513 ORTHO05D005786 1.9e-73 280.0 237 60.8
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.9e-73 280.0 232 62.1
MD05G1347400 Malus domestica HOM05D000513 ORTHO05D005786 1.9e-73 280.0 235 61.7
arahy.Tifrunner.gnm1.ann1.A9I5GT Arachis hypogaea HOM05D000513 ORTHO05D005786 3.3e-73 279.3 233 57.5
Lj4g0014019 Lotus japonicus HOM05D000513 ORTHO05D005786 5.6e-73 278.5 233 58.4
TWI63G0257 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 9.5e-73 277.7 233 57.1
MELO3C002455.2 Cucumis melo HOM05D000513 ORTHO05D005786 1.2e-72 277.3 233 58.4
arahy.Tifrunner.gnm1.ann1.4XJ09G Arachis hypogaea HOM05D000513 ORTHO05D005786 3.6e-72 275.8 233 56.2
MD10G1321600 Malus domestica HOM05D000513 ORTHO05D005786 2.3e-71 273.1 235 60.9
SGA_v2.0_scaffold4G01913 Striga asiatica HOM05D000513 ORTHO05D005786 3.1e-71 272.7 234 56.0
ClCG03G004710 Citrullus lanatus HOM05D000513 ORTHO05D005786 4.0e-71 272.3 233 57.5
Gohir.D05G173500 Gossypium hirsutum HOM05D000513 ORTHO05D005786 4.0e-71 272.3 234 57.3
Gorai.009G178700 Gossypium raimondii HOM05D000513 ORTHO05D005786 4.0e-71 272.3 234 57.3
Sed0006328 Sechium edule HOM05D000513 ORTHO05D005786 4.0e-71 272.3 233 57.1
Sopen02g025270 Solanum pennellii HOM05D000513 ORTHO05D005786 2.6e-70 269.6 233 59.7
VMungo1215G0539 Vigna mungo HOM05D000513 ORTHO05D005786 2.6e-70 269.6 230 57.4
Cc09_g01640 Coffea canephora HOM05D000513 ORTHO05D005786 3.4e-70 269.2 234 59.8
ECA248G2927 Erigeron canadensis HOM05D000513 ORTHO05D005786 3.4e-70 269.2 234 57.3
Gohir.A05G170400 Gossypium hirsutum HOM05D000513 ORTHO05D005786 3.4e-70 269.2 234 56.8
Ah.14g088010 Amaranthus hybridus HOM05D000513 ORTHO05D005786 5.8e-70 268.5 231 56.3
AUR62012712 Chenopodium quinoa HOM05D000513 ORTHO05D005786 1.7e-69 266.9 234 54.3
Phvul.003G078800 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 1.7e-69 266.9 261 51.0
ATR0794G058 Amborella trichopoda HOM05D000513 ORTHO05D005786 2.2e-69 266.5 240 54.6
MSTRG.7208 Avicennia marina HOM05D000513 ORTHO05D005786 3.7e-69 265.8 232 58.2
AUR62021943 Chenopodium quinoa HOM05D000513 ORTHO05D005786 3.7e-69 265.8 234 55.6
Sc17g0007400 Simmondsia chinensis HOM05D000513 ORTHO05D005786 3.7e-69 265.8 233 55.4
Glyma.07G260500 Glycine max HOM05D000513 ORTHO05D005786 1.1e-68 264.2 234 56.0
HPP92_011146 Vanilla planifolia HOM05D000513 ORTHO05D005786 1.1e-68 264.2 235 53.2
Nitab4.5_0005074g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 1.4e-68 263.8 236 55.1
Hund23468 Selenicereus undatus HOM05D000513 ORTHO05D005786 1.9e-68 263.5 234 56.8
Solyc02g080570.3 Solanum lycopersicum HOM05D000513 ORTHO05D005786 1.9e-68 263.5 233 58.8
DCAR_008154 Daucus carota HOM05D000513 ORTHO05D005786 3.2e-68 262.7 233 59.2
Lalb_Chr12g0196091 Lupinus albus HOM05D000513 ORTHO05D005786 3.2e-68 262.7 232 57.8
CsaV3_1G010740 Cucumis sativus L. HOM05D000513 ORTHO05D005786 1.2e-67 260.8 233 54.5
Atru.chr10.2232 Acer truncatum HOM05D000513 ORTHO05D005786 1.6e-67 260.4 235 52.8
HPP92_011145 Vanilla planifolia HOM05D000513 ORTHO05D005786 1.6e-67 260.4 235 52.8
Peaxi162Scf01102g00005 Petunia axillaris HOM05D000513 ORTHO05D005786 1.7e-66 256.9 234 57.3
Carub.0001s1136 Capsella rubella HOM05D000513 ORTHO05D005786 2.3e-66 256.5 236 54.7
CAN.G569.6 Capsicum annuum HOM05D000513 ORTHO05D005786 3.9e-66 255.8 234 57.7
unitig_748.g7967 Utricularia gibba HOM05D000513 ORTHO05D005786 3.9e-66 255.8 234 53.8
EL10Ac8g20060 Beta vulgaris HOM05D000513 ORTHO05D005786 1.9e-65 253.4 230 55.2
Manes.17G038908 Manihot esculenta HOM05D000513 ORTHO05D005786 2.5e-65 253.1 235 55.7
Sp1g10330 Schrenkiella parvula HOM05D000513 ORTHO05D005786 4.3e-65 252.3 236 57.6
Lsat_1_v5_gn_1_128760 Lactuca sativa HOM05D002121 ORTHO05D005786 1.2e-64 250.8 244 54.1
CARHR012030 Cardamine hirsuta HOM05D000513 ORTHO05D005786 3.6e-64 249.2 236 56.4
SalBow8G1130 Salvia bowleyana HOM05D000513 ORTHO05D005786 3.6e-64 249.2 236 55.9
AL1G22860 Arabidopsis lyrata HOM05D000513 ORTHO05D005786 1.1e-63 247.7 244 54.1
AT1G11720 Arabidopsis thaliana HOM05D000513 ORTHO05D005786 1.8e-63 246.9 237 54.9
C05p09830 Brassica napus HOM05D000316 ORTHO05D005786 2.3e-63 246.5 234 55.6
SEGI_21070 Sequoiadendron giganteum HOM05D000513 ORTHO05D005786 4.0e-63 245.7 229 54.6
BcaC05g25041 Brassica carinata HOM05D000513 ORTHO05D005786 6.8e-63 245.0 232 57.3
BolC5t29724H Brassica oleracea HOM05D000316 ORTHO05D005786 6.8e-63 245.0 234 54.7
A08p33270 Brassica napus HOM05D000513 ORTHO05D005786 8.9e-63 244.6 234 54.7
Thhalv10006631m.g Eutrema salsugineum HOM05D000513 ORTHO05D005786 1.2e-62 244.2 234 56.0
Os08g0191433 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 1.2e-62 244.2 235 54.5
A06p08280 Brassica napus HOM05D000316 ORTHO05D005786 2.6e-62 243.0 235 57.9
BraA06t24027Z Brassica rapa HOM05D000513 ORTHO05D005786 2.6e-62 243.0 235 57.9
C08p14920 Brassica napus HOM05D000513 ORTHO05D005786 4.4e-62 242.3 235 53.2
THA.LOC104809504 Tarenaya hassleriana HOM05D000513 ORTHO05D005786 4.4e-62 242.3 242 53.7
Aa31LG1G3050 Aethionema arabicum HOM05D000513 ORTHO05D005786 9.8e-62 241.1 237 55.3
BraA08t35246Z Brassica rapa HOM05D000513 ORTHO05D005786 9.8e-62 241.1 234 54.3
Zm00001eb070230 Zea mays HOM05D000513 ORTHO05D005786 1.7e-61 240.4 234 50.9
BolC8t49121H Brassica oleracea HOM05D000513 ORTHO05D005786 2.2e-61 240.0 250 50.4
Zm00001eb431240 Zea mays HOM05D000513 ORTHO05D005786 1.9e-60 236.9 233 50.6
Ciclev10014319m.g Citrus clementina HOM05D000513 ORTHO05D005786 4.1e-60 235.7 206 55.3
Os04g0624600 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 4.1e-60 235.7 234 45.7
HanXRQChr01g0004221 Helianthus annuus HOM05D000513 ORTHO05D005786 3.5e-59 232.6 235 52.3
Zm00001eb413290 Zea mays HOM05D000513 ORTHO05D005786 1.8e-55 220.3 246 43.9
Oeu051893.1 Olea europaea HOM05D000513 ORTHO05D005786 1.2e-54 217.6 235 48.1
Mapoly0055s0049 Marchantia polymorpha HOM05D000513 ORTHO05D005786 7.5e-54 214.9 240 49.2
vmacro03685 Vaccinium macrocarpon HOM05D000513 ORTHO05D005786 1.3e-53 214.2 232 49.6
GSVIVG01012723001 Vitis vinifera HOM05D000513 ORTHO05D005786 3.7e-53 212.6 233 55.8
SMO239G0166 Selaginella moellendorffii HOM05D000513 ORTHO05D005786 8.3e-53 211.5 232 50.4
Oeu051208.1 Olea europaea HOM05D000513 ORTHO05D005786 9.2e-52 208.0 233 49.8
Nitab4.5_0002827g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 4.4e-46 189.1 136 66.2
Migut.M01321 Erythranthe guttata HOM05D000513 ORTHO05D005786 4.9e-45 185.7 177 52.0
CBR_g950 Chara braunii HOM05D000513 ORTHO05D005786 1.4e-44 184.1 234 40.2
CDE05G3334 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 6.6e-42 175.3 125 62.4
AagrBONN_evm.TU.Sc2ySwM_344.2070 Anthoceros agrestis HOM05D000513 ORTHO05D005786 1.9e-25 120.6 181 39.8
PRCOL_00000831 Prasinoderma coloniale HOM05D000513 ORTHO05D005786 2.0e-14 84.0 217 30.0
Cre06.g282000 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D005786 3.9e-10 69.7 252 26.6


User provided reference genes

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