Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02301 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 1.1e-87 326.6 162 100.0
Aqoxy1G02137 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 1.5e-54 216.5 113 94.7
TAR627G1077 Trochodendron aralioides HOM05D000513 ORTHO05D005786 5.0e-45 184.9 113 79.6
COL.COLO4_31779 Corchorus olitorius HOM05D000513 ORTHO05D005786 5.5e-44 181.4 166 56.6
Dinv20054 Davidia involucrata HOM05D000513 ORTHO05D005786 5.5e-44 181.4 166 56.6
Sabra04G0007000 Salix brachista HOM05D000513 ORTHO05D005786 5.5e-44 181.4 113 76.1
Cpa.g.sc152.17 Carica papaya HOM05D000513 ORTHO05D005786 9.4e-44 180.6 114 75.4
Cfa000217 Carpinus fangiana HOM05D000513 ORTHO05D005786 1.2e-43 180.3 166 56.0
Peaxi162Scf01102g00005 Petunia axillaris HOM05D000513 ORTHO05D005786 1.2e-43 180.3 113 76.1
Potri.004G014100 Populus trichocarpa HOM05D000513 ORTHO05D005786 1.2e-43 180.3 166 56.6
Nn1g07138 Nelumbo nucifera HOM05D000513 ORTHO05D005786 2.1e-43 179.5 166 56.0
Duzib235G0182 Durio zibethinus HOM05D000513 ORTHO05D005786 2.7e-43 179.1 111 77.5
QL05p073090 Quercus lobata HOM05D000513 ORTHO05D005786 2.7e-43 179.1 166 56.6
Sc17g0007400 Simmondsia chinensis HOM05D000513 ORTHO05D005786 3.6e-43 178.7 113 74.3
TWI38G1833 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 3.6e-43 178.7 166 55.4
Haze_06803 Corylus avellana HOM05D000513 ORTHO05D005786 4.6e-43 178.3 113 74.3
MD05G1347400 Malus domestica HOM05D000513 ORTHO05D005786 4.6e-43 178.3 166 56.6
MBI02_g05872_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D005786 7.9e-43 177.6 166 54.8
Solyc02g080570.3 Solanum lycopersicum HOM05D000513 ORTHO05D005786 1.4e-42 176.8 113 72.6
Thecc.06G220800 Theobroma cacao HOM05D000513 ORTHO05D005786 1.8e-42 176.4 113 73.5
Hma1.2p1_0749F.1_g212600 Hydrangea macrophylla HOM05D000513 ORTHO05D005786 2.3e-42 176.0 164 57.3
Nitab4.5_0002827g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 2.3e-42 176.0 113 74.3
Nitab4.5_0005074g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 2.3e-42 176.0 113 74.3
Prupe.4G020100 Prunus persica HOM05D000513 ORTHO05D005786 3.0e-42 175.6 113 75.2
Gorai.009G178700 Gossypium raimondii HOM05D000513 ORTHO05D005786 5.1e-42 174.9 113 72.6
Eucgr.D01324 Eucalyptus grandis HOM05D000513 ORTHO05D005786 6.7e-42 174.5 113 71.7
Lj1C1231T2 Lonicera japonica HOM05D000513 ORTHO05D005786 6.7e-42 174.5 164 55.5
MELO3C002455.2 Cucumis melo HOM05D000513 ORTHO05D005786 8.8e-42 174.1 164 54.9
CsaV3_1G010740 Cucumis sativus L. HOM05D000513 ORTHO05D005786 8.8e-42 174.1 164 54.3
FvH4_3g02040 Fragaria vesca HOM05D000513 ORTHO05D005786 8.8e-42 174.1 166 52.4
Sed0027566 Sechium edule HOM05D000513 ORTHO05D005786 1.5e-41 173.3 111 73.0
GSVIVG01012723001 Vitis vinifera HOM05D000513 ORTHO05D005786 1.5e-41 173.3 164 56.7
Gohir.D05G173500 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.0e-41 172.9 113 71.7
MD10G1321600 Malus domestica HOM05D000513 ORTHO05D005786 2.0e-41 172.9 166 56.0
TAR629G0438 Trochodendron aralioides HOM05D000513 ORTHO05D005786 2.0e-41 172.9 172 54.7
Sopen02g025270 Solanum pennellii HOM05D000513 ORTHO05D005786 2.5e-41 172.6 112 71.4
Dinv13896 Davidia involucrata HOM05D000513 ORTHO05D005786 3.3e-41 172.2 166 54.8
SGA_v2.0_scaffold4G01913 Striga asiatica HOM05D000513 ORTHO05D005786 3.3e-41 172.2 113 69.9
Gohir.A05G170400 Gossypium hirsutum HOM05D000513 ORTHO05D005786 4.3e-41 171.8 113 70.8
Rhsim13G0153900 Rhododendron simsii HOM05D000513 ORTHO05D005786 4.3e-41 171.8 113 70.8
CAN.G569.6 Capsicum annuum HOM05D000513 ORTHO05D005786 5.7e-41 171.4 164 54.3
Cc09_g01640 Coffea canephora HOM05D000513 ORTHO05D005786 7.4e-41 171.0 166 53.6
FAN21G2967 Fragaria x ananassa HOM05D000513 ORTHO05D005786 7.4e-41 171.0 166 51.8
THA.LOC104809504 Tarenaya hassleriana HOM05D000513 ORTHO05D005786 7.4e-41 171.0 112 69.6
Atru.chr10.2232 Acer truncatum HOM05D000513 ORTHO05D005786 9.7e-41 170.6 160 56.2
AT1G11720 Arabidopsis thaliana HOM05D000513 ORTHO05D005786 9.7e-41 170.6 167 53.9
Os04g0624600 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 1.3e-40 170.2 159 56.6
PSO541G4629 Papaver somniferum HOM05D000513 ORTHO05D005786 1.3e-40 170.2 112 72.3
RcHm_v2.0_Chr5g0002941 Rosa chinensis HOM05D000513 ORTHO05D005786 1.3e-40 170.2 166 52.4
EL10Ac8g20060 Beta vulgaris HOM05D000513 ORTHO05D005786 1.7e-40 169.9 166 53.0
Ciclev10014319m.g Citrus clementina HOM05D000513 ORTHO05D005786 1.7e-40 169.9 113 72.6
PGR004G0078 Punica granatum HOM05D000513 ORTHO05D005786 1.7e-40 169.9 113 70.8
FAN25G0071 Fragaria x ananassa HOM05D000513 ORTHO05D005786 3.7e-40 168.7 166 51.8
TWI63G0257 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 3.7e-40 168.7 166 52.4
Manes.16G006900 Manihot esculenta HOM05D000513 ORTHO05D005786 4.8e-40 168.3 166 53.0
arahy.Tifrunner.gnm1.ann1.J4P8M7 Arachis hypogaea HOM05D000513 ORTHO05D005786 6.3e-40 167.9 113 69.9
Actinidia05513 Actinidia chinensis HOM05D000513 ORTHO05D005786 8.2e-40 167.5 165 52.7
AUR62012712 Chenopodium quinoa HOM05D000513 ORTHO05D005786 8.2e-40 167.5 112 71.4
AL1G22860 Arabidopsis lyrata HOM05D000513 ORTHO05D005786 1.1e-39 167.2 166 53.0
PSO675G1484 Papaver somniferum HOM05D000513 ORTHO05D005786 1.1e-39 167.2 112 71.4
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.8e-39 166.4 113 69.9
Glyma.15G108000 Glycine max HOM05D000513 ORTHO05D005786 1.8e-39 166.4 113 68.1
SalBow8G1130 Salvia bowleyana HOM05D000513 ORTHO05D005786 1.8e-39 166.4 164 53.7
Gorai.011G013800 Gossypium raimondii HOM05D000513 ORTHO05D005786 2.4e-39 166.0 121 63.6
HanXRQChr01g0004221 Helianthus annuus HOM05D000513 ORTHO05D005786 3.1e-39 165.6 113 68.1
Sed0006328 Sechium edule HOM05D000513 ORTHO05D005786 3.1e-39 165.6 112 69.6
ECA248G2927 Erigeron canadensis HOM05D000513 ORTHO05D005786 4.1e-39 165.2 113 69.0
Thhalv10006631m.g Eutrema salsugineum HOM05D000513 ORTHO05D005786 4.1e-39 165.2 166 53.6
Glyma.13G204700 Glycine max HOM05D000513 ORTHO05D005786 5.3e-39 164.9 113 66.4
AUR62021943 Chenopodium quinoa HOM05D000513 ORTHO05D005786 9.1e-39 164.1 112 69.6
unitig_748.g7967 Utricularia gibba HOM05D000513 ORTHO05D005786 9.1e-39 164.1 173 49.1
Zm00001eb431240 Zea mays HOM05D000513 ORTHO05D005786 1.2e-38 163.7 111 71.2
CANSAT78G1563 Cannabis sativa HOM05D000513 ORTHO05D005786 1.5e-38 163.3 164 53.7
CiPaw.10G071400 Carya illinoinensis HOM05D000513 ORTHO05D005786 1.5e-38 163.3 166 52.4
Ca_00662_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005786 1.5e-38 163.3 112 69.6
Gohir.D10G012300 Gossypium hirsutum HOM05D000513 ORTHO05D005786 1.5e-38 163.3 121 62.8
Oeu051208.1 Olea europaea HOM05D000513 ORTHO05D005786 2.6e-38 162.5 113 69.0
MSTRG.7208 Avicennia marina HOM05D000513 ORTHO05D005786 3.4e-38 162.2 164 51.8
A08p33270 Brassica napus HOM05D000513 ORTHO05D005786 3.4e-38 162.2 111 71.2
BraA08t35246Z Brassica rapa HOM05D000513 ORTHO05D005786 3.4e-38 162.2 111 71.2
Carub.0001s1136 Capsella rubella HOM05D000513 ORTHO05D005786 3.4e-38 162.2 167 51.5
Oeu051893.1 Olea europaea HOM05D000513 ORTHO05D005786 3.4e-38 162.2 166 51.2
Zm00001eb070230 Zea mays HOM05D000513 ORTHO05D005786 3.4e-38 162.2 160 53.8
Aa31LG1G3050 Aethionema arabicum HOM05D000513 ORTHO05D005786 4.5e-38 161.8 165 53.3
Hund23468 Selenicereus undatus HOM05D000513 ORTHO05D005786 4.5e-38 161.8 161 54.7
vmacro03685 Vaccinium macrocarpon HOM05D000513 ORTHO05D005786 4.5e-38 161.8 166 50.6
Gohir.A10G012640 Gossypium hirsutum HOM05D000513 ORTHO05D005786 7.7e-38 161.0 121 62.0
Medtr2g023320 Medicago truncatula HOM05D000513 ORTHO05D005786 1.0e-37 160.6 112 67.9
CARHR012030 Cardamine hirsuta HOM05D000513 ORTHO05D005786 1.3e-37 160.2 112 68.8
Lj6g0028016 Lotus japonicus HOM05D000513 ORTHO05D005786 1.3e-37 160.2 111 68.5
VMungo0540G1206 Vigna mungo HOM05D000513 ORTHO05D005786 1.3e-37 160.2 111 68.5
C08p14920 Brassica napus HOM05D000513 ORTHO05D005786 1.7e-37 159.8 111 69.4
CSS0023626 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005786 1.7e-37 159.8 164 51.2
DCAR_008154 Daucus carota HOM05D000513 ORTHO05D005786 1.7e-37 159.8 112 68.8
Lsat_1_v5_gn_1_128760 Lactuca sativa HOM05D002121 ORTHO05D005786 1.7e-37 159.8 113 66.4
TPR.G9945 Trifolium pratense HOM05D000513 ORTHO05D005786 1.7e-37 159.8 112 68.8
BolC5t29724H Brassica oleracea HOM05D000316 ORTHO05D005786 2.9e-37 159.1 111 68.5
BolC8t49121H Brassica oleracea HOM05D000513 ORTHO05D005786 3.8e-37 158.7 111 69.4
arahy.Tifrunner.gnm1.ann1.4XJ09G Arachis hypogaea HOM05D000513 ORTHO05D005786 5.0e-37 158.3 112 67.0
Lj1g0022645 Lotus japonicus HOM05D000513 ORTHO05D005786 6.5e-37 157.9 111 67.6
A06p08280 Brassica napus HOM05D000316 ORTHO05D005786 8.5e-37 157.5 111 67.6
BraA06t24027Z Brassica rapa HOM05D000513 ORTHO05D005786 8.5e-37 157.5 111 67.6
Zm00001eb413290 Zea mays HOM05D000513 ORTHO05D005786 8.5e-37 157.5 160 52.5
arahy.Tifrunner.gnm1.ann1.A9I5GT Arachis hypogaea HOM05D000513 ORTHO05D005786 1.1e-36 157.1 112 67.0
ATR0794G058 Amborella trichopoda HOM05D000513 ORTHO05D005786 1.4e-36 156.8 114 66.7
Migut.M01321 Erythranthe guttata HOM05D000513 ORTHO05D005786 1.9e-36 156.4 166 49.4
Phvul.006G149680 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 1.9e-36 156.4 112 64.3
Glyma.07G260500 Glycine max HOM05D000513 ORTHO05D005786 5.5e-36 154.8 113 66.4
Lalb_Chr12g0196091 Lupinus albus HOM05D000513 ORTHO05D005786 7.2e-36 154.5 113 66.4
BcaC05g25041 Brassica carinata HOM05D000513 ORTHO05D005786 1.2e-35 153.7 112 68.8
C05p09830 Brassica napus HOM05D000316 ORTHO05D005786 1.6e-35 153.3 107 69.2
Sp1g10330 Schrenkiella parvula HOM05D000513 ORTHO05D005786 6.1e-35 151.4 110 67.3
Lalb_Chr15g0087621 Lupinus albus HOM05D000513 ORTHO05D005786 1.0e-34 150.6 108 67.6
Psat1g180640 Pisum sativum HOM05D000513 ORTHO05D005786 2.3e-34 149.4 112 64.3
CDE05G3649 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 3.0e-34 149.1 164 48.8
CDE05G0345 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 3.9e-34 148.7 166 48.8
Manes.17G038908 Manihot esculenta HOM05D000513 ORTHO05D005786 1.1e-33 147.1 113 62.8
Manes.17G038964 Manihot esculenta HOM05D000513 ORTHO05D005786 1.1e-33 147.1 113 62.8
Os08g0191433 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 3.3e-33 145.6 172 46.5
Phvul.003G078800 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 1.8e-31 139.8 166 47.0
SEGI_21070 Sequoiadendron giganteum HOM05D000513 ORTHO05D005786 1.8e-31 139.8 166 45.8
VMungo1215G0539 Vigna mungo HOM05D000513 ORTHO05D005786 4.5e-30 135.2 166 45.2
Lj4g0014019 Lotus japonicus HOM05D000513 ORTHO05D005786 2.2e-29 132.9 157 47.1
ClCG03G004710 Citrullus lanatus HOM05D000513 ORTHO05D005786 5.0e-29 131.7 174 42.5
C08p14860 Brassica napus HOM05D000513 ORTHO05D005786 2.6e-25 119.4 79 70.9
Ah.14g088010 Amaranthus hybridus HOM05D000513 ORTHO05D005786 5.7e-25 118.2 166 41.0
HPP92_011146 Vanilla planifolia HOM05D000513 ORTHO05D005786 6.5e-21 104.8 132 45.5
CBR_g950 Chara braunii HOM05D000513 ORTHO05D005786 9.4e-20 100.9 109 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2070 Anthoceros agrestis HOM05D000513 ORTHO05D005786 2.7e-19 99.4 103 49.5
Mapoly0055s0049 Marchantia polymorpha HOM05D000513 ORTHO05D005786 2.7e-19 99.4 113 46.0
SMO239G0166 Selaginella moellendorffii HOM05D000513 ORTHO05D005786 2.7e-14 82.8 110 36.4
MCO16G430 Micromonas commoda HOM05D000513 ORTHO05D005786 4.9e-08 62.0 99 37.4


User provided reference genes

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