Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02298 Aquilegia oxysepala HOM05D066899 ORTHO05D008317 4.7e-76 287.7 140 100.0
Aqoxy7G02103 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 3.4e-10 68.9 105 36.2
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 1.0e-09 67.4 113 32.7
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 1.7e-09 66.6 124 30.6
arahy.Tifrunner.gnm1.ann1.VX4W4R Arachis hypogaea HOM05D008664 ORTHO05D000174 2.2e-09 66.2 112 32.1
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.2e-09 66.2 125 32.8
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.8e-09 65.5 99 31.3
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 6.5e-09 64.7 121 33.1
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.5e-09 64.7 124 29.0
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.5e-09 64.3 138 30.4
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.5e-09 64.3 107 32.7
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 1.1e-08 63.9 107 32.7
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 3.2e-08 62.4 126 34.1
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.2e-08 62.4 108 34.3
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.2e-08 62.0 122 27.9
Ah.06g184250 Amaranthus hybridus HOM05D027578 ORTHO05D000174 7.2e-08 61.2 128 28.9
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 7.2e-08 61.2 103 33.0
arahy.Tifrunner.gnm1.ann1.J3IYG2 Arachis hypogaea HOM05D000353 ORTHO05D008317 1.2e-07 60.5 123 28.5
Aqoxy1G03223 Aquilegia oxysepala HOM05D066899 ORTHO05D008317 1.6e-07 60.1 36 72.2
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-07 60.1 137 29.2
arahy.Tifrunner.gnm1.ann1.0VM956 Arachis hypogaea HOM05D008664 ORTHO05D000174 2.1e-07 59.7 112 29.5
arahy.Tifrunner.gnm1.ann1.7L6ESV Arachis hypogaea HOM05D008664 ORTHO05D000174 2.1e-07 59.7 112 29.5
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 2.1e-07 59.7 112 29.5
arahy.Tifrunner.gnm1.ann1.AJVM0N Arachis hypogaea HOM05D008664 ORTHO05D000174 2.1e-07 59.7 112 29.5
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.1e-07 59.7 134 31.3
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 2.7e-07 59.3 119 26.1
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.7e-07 59.3 97 32.0
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 4.6e-07 58.5 134 26.9
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.6e-07 58.5 97 27.8
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 6.1e-07 58.2 119 26.9
arahy.Tifrunner.gnm1.ann1.GSMT98 Arachis hypogaea HOM05D008664 ORTHO05D000174 7.9e-07 57.8 107 31.8
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 7.9e-07 57.8 131 26.7
arahy.Tifrunner.gnm1.ann1.02KJQT Arachis hypogaea HOM05D008664 ORTHO05D000174 1.3e-06 57.0 112 28.6
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.3e-06 57.0 99 29.3
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-06 57.0 107 33.6
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-06 56.6 131 26.7
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-06 56.6 107 28.0
arahy.Tifrunner.gnm1.ann1.U14C6K Arachis hypogaea HOM05D008664 ORTHO05D000174 2.3e-06 56.2 128 26.6
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.2 131 26.7
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.3e-06 56.2 137 27.7
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.3e-06 56.2 137 27.7
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 3.9e-06 55.5 121 31.4
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-06 55.1 131 26.7
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-06 55.1 131 26.7
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 5.1e-06 55.1 126 31.7
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.1e-06 55.1 90 31.1
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 8.7e-06 54.3 131 26.0
Lalb_Chr24g0402901 Lupinus albus HOM05D002090 ORTHO05D001923 8.7e-06 54.3 116 26.7


User provided reference genes

Program Settings