Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02272 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 1.1e-133 479.9 242 100.0
Aqoxy7G02289 Aquilegia oxysepala HOM05D004202 ORTHO05D005021 2.0e-90 336.3 260 67.3
MBI04_g19388_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 5.8e-82 308.1 226 66.8
TAR383G0028 Trochodendron aralioides HOM05D004202 ORTHO05D005021 2.2e-81 306.2 216 69.4
LjContig00542g0021230 Lotus japonicus HOM05D004202 ORTHO05D005021 1.7e-78 296.6 222 66.7
VMungo0331G0004 Vigna mungo HOM05D004202 ORTHO05D005021 3.9e-78 295.4 216 68.1
Eucgr.F03877 Eucalyptus grandis HOM05D004202 ORTHO05D005021 5.1e-78 295.0 217 66.8
CARHR090910 Cardamine hirsuta HOM05D004202 ORTHO05D005021 6.6e-78 294.7 226 66.4
MD17G1212200 Malus domestica HOM05D004202 ORTHO05D005021 8.7e-78 294.3 231 66.2
COL.COLO4_11948 Corchorus olitorius HOM05D004202 ORTHO05D005021 1.1e-77 293.9 220 67.7
RcHm_v2.0_Chr2g0135261 Rosa chinensis HOM05D004202 ORTHO05D005021 1.5e-77 293.5 227 67.0
Nn8g39505 Nelumbo nucifera HOM05D004202 ORTHO05D005021 1.9e-77 293.1 215 67.9
Duzib235G0370 Durio zibethinus HOM05D004202 ORTHO05D005021 3.3e-77 292.4 241 63.5
Prupe.3G087500 Prunus persica HOM05D004202 ORTHO05D005021 7.3e-77 291.2 232 64.2
Psat7g257200 Pisum sativum HOM05D004202 ORTHO05D005021 9.6e-77 290.8 241 62.7
AT3G15820 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 1.3e-76 290.4 226 65.9
CiPaw.01G248300 Carya illinoinensis HOM05D004202 ORTHO05D005021 1.6e-76 290.0 229 64.6
FvH4_6g29670 Fragaria vesca HOM05D004202 ORTHO05D005021 1.6e-76 290.0 216 69.0
FAN05G3204 Fragaria x ananassa HOM05D004202 ORTHO05D005021 1.6e-76 290.0 216 69.0
Manes.04G112600 Manihot esculenta HOM05D004202 ORTHO05D005021 1.6e-76 290.0 215 67.0
AL3G28480 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 2.1e-76 289.7 226 65.9
Oeu042085.1 Olea europaea HOM05D004202 ORTHO05D005021 2.1e-76 289.7 216 63.0
Thecc.06G024900 Theobroma cacao HOM05D004202 ORTHO05D005021 2.1e-76 289.7 218 68.3
Lalb_Chr01g0012351 Lupinus albus HOM05D004202 ORTHO05D005021 2.8e-76 289.3 224 66.1
Phvul.010G156400 Phaseolus vulgaris HOM05D004202 ORTHO05D005021 2.8e-76 289.3 227 67.0
Solyc06g068150.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 2.8e-76 289.3 242 62.0
Haze_16560 Corylus avellana HOM05D004202 ORTHO05D005021 3.6e-76 288.9 214 67.3
FAN09G0069 Fragaria x ananassa HOM05D004202 ORTHO05D005021 3.6e-76 288.9 216 68.5
PSO170G3116 Papaver somniferum HOM05D004202 ORTHO05D005021 3.6e-76 288.9 238 63.4
CSS0029540 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 4.8e-76 288.5 213 66.7
CSS0043041 Camellia sinensis var. sinensis HOM05D004202 ORTHO05D005021 4.8e-76 288.5 213 66.7
Lj5A72T20 Lonicera japonica HOM05D004202 ORTHO05D005021 6.2e-76 288.1 215 67.4
Oeu013862.1 Olea europaea HOM05D004202 ORTHO05D005021 6.2e-76 288.1 216 63.0
Potri.003G032200 Populus trichocarpa HOM05D004202 ORTHO05D005021 6.2e-76 288.1 215 66.5
Cfa001960 Carpinus fangiana HOM05D004202 ORTHO05D005021 8.1e-76 287.7 214 67.3
Ca_20447_v3 Cicer arietinum L. HOM05D004202 ORTHO05D005021 8.1e-76 287.7 237 61.6
QL05p029813 Quercus lobata HOM05D004202 ORTHO05D005021 1.1e-75 287.3 215 68.8
CANSAT56G4089 Cannabis sativa HOM05D004202 ORTHO05D005021 1.4e-75 287.0 223 66.4
Carub.0003s1556 Capsella rubella HOM05D004202 ORTHO05D005021 2.4e-75 286.2 217 67.3
Ciclev10026224m.g Citrus clementina HOM05D004202 ORTHO05D005021 4.0e-75 285.4 217 65.9
Dinv30605 Davidia involucrata HOM05D004202 ORTHO05D005021 5.3e-75 285.0 215 65.6
Rhsim08G0212900 Rhododendron simsii HOM05D004202 ORTHO05D005021 6.9e-75 284.6 213 67.1
Sopen06g025420 Solanum pennellii HOM05D004202 ORTHO05D005021 6.9e-75 284.6 242 60.7
A05p33580 Brassica napus HOM05D004202 ORTHO05D005021 9.0e-75 284.3 216 64.8
BraA05t22181Z Brassica rapa HOM05D004202 ORTHO05D005021 9.0e-75 284.3 216 64.8
THA.LOC104810509 Tarenaya hassleriana HOM05D004202 ORTHO05D005021 9.0e-75 284.3 226 65.0
Aa31LG8G3020 Aethionema arabicum HOM05D004202 ORTHO05D005021 1.2e-74 283.9 217 66.8
PSO017G2363 Papaver somniferum HOM05D004202 ORTHO05D005021 1.2e-74 283.9 234 62.8
SGA_v2.0_scaffold37G14766 Striga asiatica HOM05D004202 ORTHO05D005021 1.2e-74 283.9 215 64.7
Atru.chr1.2949 Acer truncatum HOM05D004202 ORTHO05D005021 1.5e-74 283.5 215 67.0
PGSC0003DMG400028510 Solanum tuberosum HOM05D004202 ORTHO05D005021 1.5e-74 283.5 214 66.8
Actinidia01745 Actinidia chinensis HOM05D004202 ORTHO05D005021 2.0e-74 283.1 214 66.4
Duzib192G0312 Durio zibethinus HOM05D004202 ORTHO05D005021 2.0e-74 283.1 222 64.4
Manes.11G056900 Manihot esculenta HOM05D004202 ORTHO05D005021 2.0e-74 283.1 217 66.8
PGR102G1411 Punica granatum HOM05D004202 ORTHO05D005021 2.6e-74 282.7 240 62.1
BcaC05g28930 Brassica carinata HOM05D004202 ORTHO05D005021 3.4e-74 282.3 216 64.8
C05p50570 Brassica napus HOM05D004202 ORTHO05D005021 3.4e-74 282.3 216 64.8
arahy.Tifrunner.gnm1.ann1.KAJ2Z5 Arachis hypogaea HOM05D004202 ORTHO05D005021 4.5e-74 282.0 211 68.2
Glyma.07G029800 Glycine max HOM05D004202 ORTHO05D005021 4.5e-74 282.0 216 66.2
Glyma.08G213100 Glycine max HOM05D004202 ORTHO05D005021 4.5e-74 282.0 217 65.9
MSTRG.11142 Avicennia marina HOM05D004202 ORTHO05D005021 5.8e-74 281.6 215 64.2
BolC5t33802H Brassica oleracea HOM05D004202 ORTHO05D005021 5.8e-74 281.6 216 64.8
Medtr4g010120 Medicago truncatula HOM05D004202 ORTHO05D005021 5.8e-74 281.6 238 61.8
Gohir.A06G185500 Gossypium hirsutum HOM05D004202 ORTHO05D005021 7.6e-74 281.2 223 62.8
TPR.G38651 Trifolium pratense HOM05D004202 ORTHO05D005021 7.6e-74 281.2 216 66.7
Peaxi162Scf00207g00630 Petunia axillaris HOM05D004202 ORTHO05D005021 9.9e-74 280.8 226 61.5
BcaB06g25690 Brassica carinata HOM05D004202 ORTHO05D005021 1.3e-73 280.4 215 64.7
arahy.Tifrunner.gnm1.ann1.J5QNAH Arachis hypogaea HOM05D004202 ORTHO05D005021 1.7e-73 280.0 211 67.8
Sed0008120 Sechium edule HOM05D004202 ORTHO05D005021 1.7e-73 280.0 218 63.3
Hma1.2p1_1144F.1_g261300 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 2.2e-73 279.6 215 65.6
Potri.001G204100 Populus trichocarpa HOM05D004202 ORTHO05D005021 2.9e-73 279.3 208 67.3
arahy.Tifrunner.gnm1.ann1.42NKCZ Arachis hypogaea HOM05D004202 ORTHO05D005021 3.8e-73 278.9 211 67.8
Nitab4.5_0003463g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 3.8e-73 278.9 222 61.3
Sp3g14140 Schrenkiella parvula HOM05D004202 ORTHO05D005021 3.8e-73 278.9 215 64.2
Thhalv10021241m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 8.4e-73 277.7 215 64.2
Prupe.3G087400 Prunus persica HOM05D004202 ORTHO05D005021 8.4e-73 277.7 227 63.4
AL3G28490 Arabidopsis lyrata HOM05D004202 ORTHO05D005021 1.1e-72 277.3 219 65.3
Nitab4.5_0008575g0020 Nicotiana tabacum HOM05D004202 ORTHO05D005021 1.1e-72 277.3 222 60.8
PGSC0003DMG400000640 Solanum tuberosum HOM05D004202 ORTHO05D005021 1.1e-72 277.3 216 63.4
TWI18G0582 Tripterygium wilfordii HOM05D004202 ORTHO05D005021 1.1e-72 277.3 218 64.2
BcaC01g03855 Brassica carinata HOM05D004202 ORTHO05D005021 1.4e-72 276.9 215 63.3
A03p39480 Brassica napus HOM05D004202 ORTHO05D005021 1.4e-72 276.9 215 63.3
C03p47880 Brassica napus HOM05D004202 ORTHO05D005021 1.4e-72 276.9 215 63.3
BolC3t17065H Brassica oleracea HOM05D004202 ORTHO05D005021 1.4e-72 276.9 215 63.3
BraA03t13098Z Brassica rapa HOM05D004202 ORTHO05D005021 1.4e-72 276.9 215 63.3
Lj9A500T78 Lonicera japonica HOM05D004202 ORTHO05D005021 1.4e-72 276.9 225 62.2
SalBow2G2770 Salvia bowleyana HOM05D004202 ORTHO05D005021 1.4e-72 276.9 213 62.9
Solyc03g116740.3 Solanum lycopersicum HOM05D004202 ORTHO05D005021 1.4e-72 276.9 216 63.4
Sopen03g035650 Solanum pennellii HOM05D004202 ORTHO05D005021 1.4e-72 276.9 216 63.4
Hma1.2p1_0042F.1_g025610 Hydrangea macrophylla HOM05D004202 ORTHO05D005021 1.9e-72 276.6 216 63.4
Lsat_1_v5_gn_4_90081 Lactuca sativa HOM05D004202 ORTHO05D005021 2.4e-72 276.2 209 64.6
Hund06558 Selenicereus undatus HOM05D004202 ORTHO05D005021 2.4e-72 276.2 213 64.3
Gorai.010G225300 Gossypium raimondii HOM05D004202 ORTHO05D005021 3.2e-72 275.8 232 60.3
Ah.01g020590 Amaranthus hybridus HOM05D004202 ORTHO05D005021 4.2e-72 275.4 239 59.0
AT3G15830 Arabidopsis thaliana HOM05D004202 ORTHO05D005021 4.2e-72 275.4 219 64.4
FAN14G0864 Fragaria x ananassa HOM05D004202 ORTHO05D005021 4.2e-72 275.4 240 61.7
CAN.G1503.7 Capsicum annuum HOM05D004202 ORTHO05D005021 7.1e-72 274.6 232 60.3
HanXRQChr02g0058561 Helianthus annuus HOM05D004202 ORTHO05D005021 7.1e-72 274.6 224 62.1
Carub.0003s1557 Capsella rubella HOM05D004202 ORTHO05D005021 1.2e-71 273.9 219 63.9
ClCG07G012460 Citrullus lanatus HOM05D004202 ORTHO05D005021 1.2e-71 273.9 221 61.5
ECA232G2164 Erigeron canadensis HOM05D004202 ORTHO05D005021 1.6e-71 273.5 208 64.9
Gohir.D06G192100 Gossypium hirsutum HOM05D004202 ORTHO05D005021 1.6e-71 273.5 232 59.9
MELO3C017864.2 Cucumis melo HOM05D004202 ORTHO05D005021 2.1e-71 273.1 222 62.6
HanXRQChr16g0500411 Helianthus annuus HOM05D004202 ORTHO05D005021 2.7e-71 272.7 203 66.5
CsaV3_4G001700 Cucumis sativus L. HOM05D004202 ORTHO05D005021 3.5e-71 272.3 222 62.2
Sabra03G0018400 Salix brachista HOM05D004202 ORTHO05D005021 3.5e-71 272.3 213 64.8
Peaxi162Scf00332g00619 Petunia axillaris HOM05D004202 ORTHO05D005021 4.6e-71 271.9 212 62.7
AUR62011519 Chenopodium quinoa HOM05D004202 ORTHO05D005021 1.0e-70 270.8 213 62.4
DCAR_025511 Daucus carota HOM05D004202 ORTHO05D005021 1.3e-70 270.4 213 65.3
Cpa.g.sc10.268 Carica papaya HOM05D004202 ORTHO05D005021 1.8e-70 270.0 214 64.0
Sc10g0005940 Simmondsia chinensis HOM05D004202 ORTHO05D005021 2.3e-70 269.6 233 58.8
unitig_699.g19094 Utricularia gibba HOM05D004202 ORTHO05D005021 8.7e-70 267.7 207 61.8
BcaC09g48559 Brassica carinata HOM05D004202 ORTHO05D005021 1.1e-69 267.3 216 64.4
C01p48640 Brassica napus HOM05D004202 ORTHO05D005021 1.1e-69 267.3 216 64.4
CAN.G407.80 Capsicum annuum HOM05D004202 ORTHO05D005021 1.5e-69 266.9 216 61.6
Sc10g0008080 Simmondsia chinensis HOM05D004202 ORTHO05D005021 1.9e-69 266.5 216 61.1
EL10Ac9g21900 Beta vulgaris HOM05D004202 ORTHO05D005021 3.3e-69 265.8 213 62.0
BolC1t04818H Brassica oleracea HOM05D004202 ORTHO05D005021 3.3e-69 265.8 216 63.9
AUR62016337 Chenopodium quinoa HOM05D004202 ORTHO05D005021 3.3e-69 265.8 208 62.5
Migut.I00763 Erythranthe guttata HOM05D004202 ORTHO05D005021 4.3e-69 265.4 213 62.0
BcaB04g20901 Brassica carinata HOM05D004202 ORTHO05D005021 2.8e-68 262.7 216 63.0
BraA01t03881Z Brassica rapa HOM05D004202 ORTHO05D005021 8.1e-68 261.2 216 63.0
CARHR090920 Cardamine hirsuta HOM05D004202 ORTHO05D005021 8.1e-68 261.2 237 59.1
Lj3g0004144 Lotus japonicus HOM05D004202 ORTHO05D005021 8.1e-68 261.2 222 61.3
A01p38300 Brassica napus HOM05D004202 ORTHO05D005021 1.1e-67 260.8 216 63.0
Gohir.D05G124300 Gossypium hirsutum HOM05D004202 ORTHO05D005021 1.8e-67 260.0 231 57.1
Gohir.A05G123350 Gossypium hirsutum HOM05D004202 ORTHO05D005021 4.0e-67 258.8 227 58.1
HPP92_023144 Vanilla planifolia HOM05D004202 ORTHO05D005021 4.0e-67 258.8 196 65.8
GSVIVG01017341001 Vitis vinifera HOM05D004202 ORTHO05D005021 6.9e-67 258.1 175 73.1
Gorai.009G128300 Gossypium raimondii HOM05D004202 ORTHO05D005021 9.0e-67 257.7 231 57.1
Cc04_g04400 Coffea canephora HOM05D004202 ORTHO05D005021 1.3e-65 253.8 181 69.1
CDE07G1814 Ceratophyllum demersum HOM05D004202 ORTHO05D005021 6.5e-65 251.5 211 61.1
Thhalv10015624m.g Eutrema salsugineum HOM05D004202 ORTHO05D005021 2.5e-64 249.6 209 59.3
A02p09730 Brassica napus HOM05D004202 ORTHO05D005021 5.1e-62 241.9 215 57.2
BraA02t06038Z Brassica rapa HOM05D004202 ORTHO05D005021 5.1e-62 241.9 215 57.2
BcaC03g14245 Brassica carinata HOM05D004202 ORTHO05D005021 6.7e-62 241.5 215 57.7
C02p16260 Brassica napus HOM05D004202 ORTHO05D005021 6.7e-62 241.5 215 57.7
BolC2t07727H Brassica oleracea HOM05D004202 ORTHO05D005021 6.7e-62 241.5 215 57.7
MBI04_g42944_MAGBIO Magnolia biondii HOM05D004202 ORTHO05D005021 2.5e-61 239.6 180 65.6
BcaB05g22200 Brassica carinata HOM05D004202 ORTHO05D005021 3.3e-61 239.2 215 56.7
Lj3g0021663 Lotus japonicus HOM05D004202 ORTHO05D005021 1.3e-57 227.3 223 57.0
Os06g0607100 Oryza sativa ssp. japonica HOM05D004202 ORTHO05D005021 2.9e-57 226.1 206 57.8
Lsat_1_v5_gn_1_34380 Lactuca sativa HOM05D004202 ORTHO05D005021 1.4e-56 223.8 231 52.4
Mapoly0019s0013 Marchantia polymorpha HOM05D004202 ORTHO05D005021 2.5e-56 223.0 200 56.0
Oeu013866.1 Olea europaea HOM05D004202 ORTHO05D005021 3.4e-50 202.6 216 47.2
Thecc.06G024300 Theobroma cacao HOM05D004202 ORTHO05D005021 5.5e-48 195.3 137 71.5
Thecc.06G024700 Theobroma cacao HOM05D004202 ORTHO05D005021 1.6e-47 193.7 137 70.8
Lalb_Chr25g0279291 Lupinus albus HOM05D004202 ORTHO05D005021 4.6e-47 192.2 129 75.2
Sabra01G0157700 Salix brachista HOM05D004202 ORTHO05D005021 4.6e-47 192.2 218 50.0
Pp3c20_11410 Physcomitrium patens HOM05D004202 ORTHO05D005021 1.5e-45 187.2 212 47.2
Oeu013867.1 Olea europaea HOM05D004202 ORTHO05D005021 2.0e-45 186.8 226 43.4
Sp6g17250 Schrenkiella parvula HOM05D004202 ORTHO05D005021 2.0e-45 186.8 213 48.4
FAN02G2528 Fragaria x ananassa HOM05D004202 ORTHO05D005021 2.5e-45 186.4 269 45.4
BcaB01g04346 Brassica carinata HOM05D004202 ORTHO05D005021 7.7e-42 174.9 221 46.2
Oeu042081.1 Olea europaea HOM05D004202 ORTHO05D005021 1.6e-39 167.2 176 51.7
Pp3c8_10870 Physcomitrium patens HOM05D004202 ORTHO05D005021 9.7e-37 157.9 160 53.1
Actinidia15761 Actinidia chinensis HOM05D004202 ORTHO05D005021 3.7e-28 129.4 106 57.5
Nitab4.5_0000373g0050 Nicotiana tabacum HOM05D004202 ORTHO05D005021 1.9e-24 117.1 78 73.1
Lalb_Chr25g0279281 Lupinus albus HOM05D004202 ORTHO05D005021 9.4e-16 88.2 90 45.6
AagrBONN_evm.TU.Sc2ySwM_228.136 Anthoceros agrestis HOM05D004202 ORTHO05D005021 3.4e-13 79.7 89 44.9
Nitab4.5_0000373g0060 Nicotiana tabacum HOM05D004202 ORTHO05D005021 1.8e-11 73.9 76 48.7
Zm00001eb386530 Zea mays HOM05D004202 ORTHO05D005021 5.0e-09 65.9 75 44.0
BcaB08g35892 Brassica carinata HOM05D004202 ORTHO05D096023 1.6e-07 60.8 67 52.2
QL03p052981 Quercus lobata HOM05D004202 ORTHO05D005021 3.6e-07 59.7 55 54.5
Lj5P198T82 Lonicera japonica HOM05D004202 ORTHO05D005021 3.0e-06 56.6 63 39.7


User provided reference genes

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