Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 6.8e-90 334.0 167 100.0
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.5e-57 226.5 173 74.0
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.6e-57 225.7 173 72.8
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.2e-56 222.6 159 73.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 5.5e-55 218.0 156 73.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 5.5e-55 218.0 156 73.7
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.0e-53 213.8 139 79.1
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.0e-53 212.2 139 78.4
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.9e-53 211.8 140 80.0
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 5.1e-53 211.5 139 77.7
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 5.1e-53 211.5 151 72.8
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 6.7e-53 211.1 140 79.3
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 6.7e-53 211.1 168 71.4
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 8.7e-53 210.7 162 69.1
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.5e-52 209.9 169 69.2
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.9e-52 209.5 139 77.0
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.5e-52 209.1 140 79.3
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.5e-52 209.1 140 79.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.3e-52 208.8 140 78.6
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 4.3e-52 208.4 145 74.5
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 4.3e-52 208.4 163 72.4
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 5.6e-52 208.0 162 69.8
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 5.6e-52 208.0 163 69.3
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 5.6e-52 208.0 169 68.0
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 5.6e-52 208.0 167 70.7
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 7.4e-52 207.6 164 69.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 9.6e-52 207.2 162 67.9
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 9.6e-52 207.2 140 77.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.3e-51 206.8 162 70.4
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.3e-51 206.8 170 63.5
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.6e-51 206.5 140 76.4
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.6e-51 206.5 164 68.3
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.1e-51 206.1 164 66.5
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 3.7e-51 205.3 162 72.8
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 3.7e-51 205.3 169 71.6
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 3.7e-51 205.3 162 72.8
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 3.7e-51 205.3 169 71.6
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 4.8e-51 204.9 162 72.8
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 4.8e-51 204.9 137 75.9
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 4.8e-51 204.9 164 68.9
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 6.2e-51 204.5 165 66.7
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.2e-51 204.5 164 64.6
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 6.2e-51 204.5 139 73.4
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 8.2e-51 204.1 162 71.0
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 8.2e-51 204.1 168 66.1
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 8.2e-51 204.1 164 66.5
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 8.2e-51 204.1 106 92.5
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 8.2e-51 204.1 156 71.2
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 8.2e-51 204.1 139 77.0
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.1e-50 203.8 162 67.9
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-50 203.8 162 71.6
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-50 203.8 164 71.3
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-50 203.8 162 71.6
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-50 203.8 162 71.6
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.1e-50 203.8 164 71.3
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.1e-50 203.8 169 67.5
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.1e-50 203.8 170 64.7
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.1e-50 203.8 139 76.3
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.4e-50 203.4 139 77.0
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.4e-50 202.6 162 71.6
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.4e-50 202.6 162 71.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.4e-50 202.6 162 71.6
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.1e-50 202.2 168 66.1
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 3.1e-50 202.2 154 69.5
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.1e-50 202.2 139 77.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 4.0e-50 201.8 139 74.8
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 5.3e-50 201.4 166 66.9
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 5.3e-50 201.4 168 66.7
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 5.3e-50 201.4 168 65.5
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 6.9e-50 201.1 166 68.7
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 6.9e-50 201.1 139 74.8
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.9e-50 201.1 161 67.7
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 9.0e-50 200.7 161 70.8
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 9.0e-50 200.7 163 66.9
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.2e-49 200.3 173 66.5
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.2e-49 200.3 169 65.7
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.5e-49 199.9 162 69.1
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.5e-49 199.9 162 69.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.5e-49 199.9 140 74.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 2.0e-49 199.5 164 67.7
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.6e-49 199.1 141 74.5
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.4e-49 198.7 141 74.5
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 4.5e-49 198.4 166 65.1
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 5.8e-49 198.0 138 75.4
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 5.8e-49 198.0 173 65.9
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 7.6e-49 197.6 164 64.0
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.0e-48 197.2 162 68.5
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 2.2e-48 196.1 167 64.7
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 2.2e-48 196.1 165 66.1
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 6.5e-48 194.5 165 66.1
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 6.5e-48 194.5 141 71.6
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 8.4e-48 194.1 158 65.8
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 8.4e-48 194.1 167 66.5
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.1e-47 193.7 170 65.9
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.4e-47 193.4 165 66.1
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.5e-47 192.6 163 63.8
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 4.2e-47 191.8 160 65.0
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 4.2e-47 191.8 155 67.7
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 7.1e-47 191.0 160 65.6
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 7.1e-47 191.0 151 68.2
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.2e-46 190.3 103 86.4
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.6e-46 189.9 138 73.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.1e-46 189.5 106 87.7
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.7e-46 189.1 101 91.1
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 4.6e-46 188.3 138 73.2
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.8e-45 186.4 99 91.9
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 1.9e-44 183.0 124 74.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 3.3e-44 182.2 136 69.9
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 5.7e-44 181.4 138 68.1
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 2.8e-43 179.1 150 64.7
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.8e-43 178.3 133 69.9
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 4.8e-43 178.3 134 67.9
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.5e-41 173.3 101 82.2
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 7.2e-39 164.5 139 66.2
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.3e-35 153.7 97 72.2
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.2e-33 147.1 94 73.4
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 3.4e-33 145.6 157 47.8
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 5.9e-33 144.8 169 53.8
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 5.9e-33 144.8 137 51.8
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.2e-32 142.9 162 56.8
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 6.5e-32 141.4 157 47.1
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.1e-31 140.6 94 68.1
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.8e-29 133.3 74 86.5
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 2.6e-20 102.8 90 54.4
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.1e-18 97.4 109 51.4
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 4.5e-17 92.0 53 84.9
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 4.5e-17 92.0 86 53.5
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 2.9e-16 89.4 51 86.3
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 2.9e-16 89.4 51 86.3
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 8.8e-13 77.8 106 39.6


User provided reference genes

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