Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 7.7e-155 550.4 278 100.0
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 2.3e-29 133.7 140 52.1
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 6.8e-26 122.1 141 51.1
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.5e-25 120.9 102 60.8
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 2.0e-25 120.6 137 48.9
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 2.0e-25 120.6 137 48.9
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 3.7e-24 116.3 161 45.3
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 8.3e-24 115.2 79 70.9
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 1.1e-23 114.8 81 67.9
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.4e-23 114.4 98 62.2
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.4e-23 114.4 133 53.4
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 4.1e-23 112.8 139 50.4
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 5.4e-23 112.5 104 58.7
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 1.2e-22 111.3 76 69.7
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 1.6e-22 110.9 142 48.6
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 2.0e-22 110.5 125 52.8
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 3.5e-22 109.8 77 67.5
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 3.5e-22 109.8 77 67.5
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 3.5e-22 109.8 75 66.7
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 3.5e-22 109.8 68 75.0
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 4.5e-22 109.4 77 67.5
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.5e-22 109.4 75 70.7
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 4.5e-22 109.4 114 49.1
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 5.9e-22 109.0 77 67.5
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 5.9e-22 109.0 109 51.4
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 5.9e-22 109.0 95 57.9
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 1.0e-21 108.2 122 50.0
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.0e-21 108.2 76 71.1
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.0e-21 108.2 87 60.9
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 1.3e-21 107.8 77 68.8
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.3e-21 107.8 107 57.9
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.3e-21 107.8 63 74.6
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 1.7e-21 107.5 76 65.8
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 1.7e-21 107.5 162 43.2
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 2.3e-21 107.1 76 65.8
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 2.9e-21 106.7 126 52.4
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 2.9e-21 106.7 131 45.8
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.9e-21 106.7 89 58.4
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 3.9e-21 106.3 81 65.4
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 3.9e-21 106.3 79 63.3
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 5.0e-21 105.9 135 46.7
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 6.6e-21 105.5 117 52.1
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 8.6e-21 105.1 106 53.8
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 8.6e-21 105.1 75 64.0
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 1.1e-20 104.8 79 63.3
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.1e-20 104.8 97 58.8
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 1.9e-20 104.0 131 45.0
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.9e-20 104.0 88 63.6
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 4.3e-20 102.8 109 50.5
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 5.6e-20 102.4 96 57.3
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 5.6e-20 102.4 64 73.4
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 5.6e-20 102.4 79 62.0
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 9.5e-20 101.7 74 68.9
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 9.5e-20 101.7 111 55.0
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 1.6e-19 100.9 124 48.4
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 2.8e-19 100.1 74 67.6
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.8e-19 100.1 74 67.6
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 2.8e-19 100.1 144 45.8
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 3.6e-19 99.8 71 60.6
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 3.6e-19 99.8 69 62.3
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 3.6e-19 99.8 70 64.3
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 6.1e-19 99.0 77 61.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 8.0e-19 98.6 124 46.8
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 1.0e-18 98.2 120 42.5
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.8e-18 97.4 56 73.2
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 3.1e-18 96.7 67 61.2
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 4.0e-18 96.3 129 42.6
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 4.0e-18 96.3 111 48.6
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 4.0e-18 96.3 75 64.0
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 5.2e-18 95.9 74 63.5
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 6.8e-18 95.5 156 42.9
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 6.8e-18 95.5 75 61.3
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.2e-17 94.7 124 46.0
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 1.5e-17 94.4 114 48.2
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.5e-17 94.4 75 61.3
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 2.0e-17 94.0 119 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 4.4e-17 92.8 66 62.1
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 1.3e-16 91.3 73 58.9
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 1.7e-16 90.9 136 42.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 2.2e-16 90.5 91 49.5
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 1.4e-15 87.8 59 67.8
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 2.4e-15 87.0 56 66.1
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 2.7e-14 83.6 68 57.4
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 4.6e-14 82.8 59 66.1
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 5.0e-13 79.3 77 51.9
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 6.6e-13 79.0 142 34.5
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 8.6e-13 78.6 147 36.7
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 1.4e-10 71.2 98 45.9
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 5.2e-10 69.3 71 50.7
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 8.9e-10 68.6 44 72.7
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 1.3e-08 64.7 105 38.1
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 2.9e-08 63.5 75 44.0
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 6.4e-08 62.4 116 42.2
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.1e-07 61.6 65 60.0
MBI16_g11563_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.4e-07 60.5 46 63.0
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 2.1e-06 57.4 63 52.4
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 2.1e-06 57.4 100 39.0
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 3.5e-06 56.6 87 47.1


User provided reference genes

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