Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02185 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 1.1e-53 213.0 106 100.0
Dinv10568 Davidia involucrata HOM05D000520 ORTHO05D000399 5.8e-10 67.8 51 66.7
Lsat_1_v5_gn_8_13301 Lactuca sativa HOM05D000520 ORTHO05D000399 9.9e-10 67.0 47 68.1
Lsat_1_v5_gn_9_60620 Lactuca sativa HOM05D009001 ORTHO05D000399 9.9e-10 67.0 48 66.7
PGSC0003DMG400023960 Solanum tuberosum HOM05D000520 ORTHO05D000399 9.9e-10 67.0 54 61.1
Solyc06g050710.4 Solanum lycopersicum HOM05D000520 ORTHO05D000399 1.7e-09 66.2 54 61.1
Sopen06g016270 Solanum pennellii HOM05D000520 ORTHO05D000399 1.7e-09 66.2 54 61.1
CSS0009158 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.2e-09 65.9 52 61.5
CSS0043309 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.2e-09 65.9 52 61.5
Nitab4.5_0001291g0070 Nicotiana tabacum HOM05D000520 ORTHO05D000399 2.2e-09 65.9 53 60.4
HanXRQChr08g0222621 Helianthus annuus HOM05D000520 ORTHO05D000399 2.9e-09 65.5 47 63.8
Nitab4.5_0002854g0110 Nicotiana tabacum HOM05D000520 ORTHO05D000399 2.9e-09 65.5 53 60.4
Os01g0826000 Oryza sativa ssp. japonica HOM05D000520 ORTHO05D000399 3.8e-09 65.1 43 69.8
Peaxi162Scf00284g00228 Petunia axillaris HOM05D000520 ORTHO05D000399 3.8e-09 65.1 53 60.4
Nn2g13284 Nelumbo nucifera HOM05D000520 ORTHO05D000399 4.9e-09 64.7 43 69.8
Manes.07G136400 Manihot esculenta HOM05D000520 ORTHO05D000399 6.4e-09 64.3 52 63.5
Sc14g0005550 Simmondsia chinensis HOM05D000520 ORTHO05D000399 6.4e-09 64.3 67 49.3
GSVIVG01032731001 Vitis vinifera HOM05D000520 ORTHO05D000399 8.4e-09 63.9 41 70.7
Potri.010G182700 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.1e-08 63.5 58 56.9
CANSAT56G0564 Cannabis sativa HOM05D000520 ORTHO05D000399 1.4e-08 63.2 50 64.0
Haze_17306 Corylus avellana HOM05D000520 ORTHO05D000399 1.4e-08 63.2 40 70.0
Cc02_g05820 Coffea canephora HOM05D000520 ORTHO05D000399 1.9e-08 62.8 57 54.4
MSTRG.27294 Avicennia marina HOM05D000520 ORTHO05D000399 2.4e-08 62.4 50 62.0
CAN.G865.11 Capsicum annuum HOM05D000520 ORTHO05D000399 2.4e-08 62.4 54 57.4
HanXRQChr15g0493871 Helianthus annuus HOM05D000520 ORTHO05D000399 2.4e-08 62.4 40 72.5
Atru.chr12.134 Acer truncatum HOM05D000520 ORTHO05D000399 3.2e-08 62.0 41 68.3
BraA10t45126Z Brassica rapa HOM05D000520 ORTHO05D000399 3.2e-08 62.0 55 54.5
AUR62022965 Chenopodium quinoa HOM05D000520 ORTHO05D000399 3.2e-08 62.0 55 54.5
DCAR_024797 Daucus carota HOM05D001699 ORTHO05D000399 3.2e-08 62.0 47 63.8
Hund13522 Selenicereus undatus HOM05D000520 ORTHO05D000399 3.2e-08 62.0 61 54.1
TAR623G0897 Trochodendron aralioides HOM05D002596 ORTHO05D002851 3.2e-08 62.0 41 70.7
Eucgr.G03105 Eucalyptus grandis HOM05D000520 ORTHO05D000399 4.1e-08 61.6 49 59.2
Lalb_Chr11g0075131 Lupinus albus HOM05D000520 ORTHO05D000399 4.1e-08 61.6 57 52.6
Prupe.2G258300 Prunus persica HOM05D000520 ORTHO05D000399 4.1e-08 61.6 50 60.0
Cpa.g.sc19.110 Carica papaya HOM05D000520 ORTHO05D000399 5.4e-08 61.2 52 55.8
ECA232G0418 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.4e-08 61.2 40 72.5
MD01G1160400 Malus domestica HOM05D000520 ORTHO05D000399 5.4e-08 61.2 50 60.0
A10p30840 Brassica napus HOM05D000520 ORTHO05D000399 7.1e-08 60.8 55 52.7
C09p71340 Brassica napus HOM05D000520 ORTHO05D000399 7.1e-08 60.8 55 52.7
CiPaw.01G303000 Carya illinoinensis HOM05D000520 ORTHO05D000399 7.1e-08 60.8 50 60.0
Lj6g0010443 Lotus japonicus HOM05D000520 ORTHO05D000399 7.1e-08 60.8 52 55.8
arahy.Tifrunner.gnm1.ann1.E0TNI0 Arachis hypogaea HOM05D000127 ORTHO05D000243 9.2e-08 60.5 58 51.7
Ciclev10033238m.g Citrus clementina HOM05D000520 ORTHO05D000399 9.2e-08 60.5 51 58.8
Lalb_Chr17g0347011 Lupinus albus HOM05D000520 ORTHO05D000399 9.2e-08 60.5 58 55.2
Sp6g37460 Schrenkiella parvula HOM05D000520 ORTHO05D000399 9.2e-08 60.5 55 52.7
ClCG11G005930 Citrullus lanatus HOM05D000520 ORTHO05D000399 1.2e-07 60.1 62 56.5
FAN06G2196 Fragaria x ananassa HOM05D000007 ORTHO05D000399 1.2e-07 60.1 46 60.9
Gohir.A13G013500 Gossypium hirsutum HOM05D000520 ORTHO05D000399 1.2e-07 60.1 50 58.0
PSO339G3969 Papaver somniferum HOM05D000520 ORTHO05D000399 1.2e-07 60.1 43 65.1
PSO384G1077 Papaver somniferum HOM05D000520 ORTHO05D000399 1.2e-07 60.1 43 65.1
TWI53G1245 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 1.2e-07 60.1 61 49.2
EL10Ac2g04916 Beta vulgaris HOM05D000520 ORTHO05D000399 1.6e-07 59.7 51 54.9
BolC9t59896H Brassica oleracea HOM05D000520 ORTHO05D000399 1.6e-07 59.7 55 50.9
MBI15_g19958_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 1.6e-07 59.7 43 67.4
QL08p064089 Quercus lobata HOM05D000520 ORTHO05D000399 1.6e-07 59.7 50 56.0
QL08p064120 Quercus lobata HOM05D000520 ORTHO05D000399 1.6e-07 59.7 50 56.0
Aa31LG11G6450 Aethionema arabicum HOM05D000520 ORTHO05D000399 2.1e-07 59.3 53 56.6
arahy.Tifrunner.gnm1.ann1.46LX0D Arachis hypogaea HOM05D000520 ORTHO05D000399 2.1e-07 59.3 55 52.7
Thhalv10015175m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 2.1e-07 59.3 55 50.9
SalBow3G1779 Salvia bowleyana HOM05D000520 ORTHO05D000399 2.1e-07 59.3 45 60.0
BcaC06g32249 Brassica carinata HOM05D000520 ORTHO05D000399 2.7e-07 58.9 55 50.9
Migut.F00616 Erythranthe guttata HOM05D000520 ORTHO05D000399 2.7e-07 58.9 55 54.5
MELO3C019982.2 Cucumis melo HOM05D000520 ORTHO05D000399 3.5e-07 58.5 51 56.9
CsaV3_6G002070 Cucumis sativus L. HOM05D000520 ORTHO05D000399 3.5e-07 58.5 51 56.9
Glyma.11G234100 Glycine max HOM05D000520 ORTHO05D000399 3.5e-07 58.5 55 50.9
ATR0594G059 Amborella trichopoda HOM05D004253 ORTHO05D005013 4.6e-07 58.2 41 65.9
CDE04G2050 Ceratophyllum demersum HOM05D007559 ORTHO05D009642 4.6e-07 58.2 41 65.9
FvH4_7g25401 Fragaria vesca HOM05D000520 ORTHO05D000399 4.6e-07 58.2 55 52.7
FAN10G1782 Fragaria x ananassa HOM05D000520 ORTHO05D000399 4.6e-07 58.2 55 52.7
Glyma.02G260700 Glycine max HOM05D000520 ORTHO05D000399 4.6e-07 58.2 58 51.7
COL.COLO4_25813 Corchorus olitorius HOM05D000520 ORTHO05D000399 6.0e-07 57.8 52 53.8
Gohir.D13G014600 Gossypium hirsutum HOM05D000520 ORTHO05D000399 6.0e-07 57.8 50 56.0
Gorai.013G015800 Gossypium raimondii HOM05D000520 ORTHO05D000399 6.0e-07 57.8 50 56.0
MBI15_g03641_MAGBIO Magnolia biondii HOM05D004253 ORTHO05D005013 6.0e-07 57.8 43 65.1
AL6G15260 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 7.8e-07 57.4 55 49.1
FAN03G0385 Fragaria x ananassa HOM05D000520 ORTHO05D000399 7.8e-07 57.4 55 52.7
Phvul.001G247400 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 7.8e-07 57.4 51 54.9
Zm00001eb368660 Zea mays HOM05D000520 ORTHO05D000399 7.8e-07 57.4 43 62.8
FAN01G3104 Fragaria x ananassa HOM05D000007 ORTHO05D000399 1.0e-06 57.0 55 50.9
Sed0026591 Sechium edule HOM05D000520 ORTHO05D000399 1.0e-06 57.0 50 56.0
Ah.04g162240 Amaranthus hybridus HOM05D000999 ORTHO05D000399 1.7e-06 56.2 89 34.8
arahy.Tifrunner.gnm1.ann1.110NX6 Arachis hypogaea HOM05D000520 ORTHO05D000399 1.7e-06 56.2 51 54.9
arahy.Tifrunner.gnm1.ann1.WNP8KX Arachis hypogaea HOM05D000520 ORTHO05D000399 1.7e-06 56.2 51 54.9
Lalb_Chr04g0250351 Lupinus albus HOM05D000520 ORTHO05D000399 1.7e-06 56.2 51 54.9
Phvul.008G219600 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 1.7e-06 56.2 52 53.8
Actinidia00652 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.3e-06 55.8 53 52.8
Thecc.10G008500 Theobroma cacao HOM05D000520 ORTHO05D000399 2.3e-06 55.8 49 55.1
AT5G05365 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 3.0e-06 55.5 55 47.3
VMungo1383G0377 Vigna mungo HOM05D002596 ORTHO05D000399 3.0e-06 55.5 69 46.4
Carub.0006s0429 Capsella rubella HOM05D000520 ORTHO05D000399 3.9e-06 55.1 55 47.3
LjContig00357g0023458 Lotus japonicus HOM05D000520 ORTHO05D000399 3.9e-06 55.1 51 54.9
TPR.G35647 Trifolium pratense HOM05D000520 ORTHO05D000399 3.9e-06 55.1 53 50.9
Medtr5g083710 Medicago truncatula HOM05D000520 ORTHO05D000399 6.6e-06 54.3 50 56.0
Medtr3g072000 Medicago truncatula HOM05D000520 ORTHO05D000399 8.6e-06 53.9 53 50.9
PGR142G2231 Punica granatum HOM05D000520 ORTHO05D000399 8.6e-06 53.9 48 54.2
RcHm_v2.0_Chr1g0371361 Rosa chinensis HOM05D000520 ORTHO05D000399 8.6e-06 53.9 55 50.9
TPR.G20212 Trifolium pratense HOM05D000520 ORTHO05D000399 8.6e-06 53.9 50 56.0


User provided reference genes

Program Settings