Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 5.0e-37 157.5 95 100.0
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 7.7e-14 80.5 64 64.1
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 3.8e-13 78.2 62 62.9
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 3.2e-12 75.1 56 69.6
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 3.2e-12 75.1 63 61.9
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 4.2e-12 74.7 68 58.8
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 4.2e-12 74.7 67 58.2
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 4.2e-12 74.7 67 58.2
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 5.5e-12 74.3 66 59.1
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 5.5e-12 74.3 48 70.8
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 7.2e-12 73.9 67 56.7
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 9.5e-12 73.6 51 68.6
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 9.5e-12 73.6 66 59.1
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.6e-11 72.8 62 61.3
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 1.6e-11 72.8 65 56.9
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 2.8e-11 72.0 57 63.2
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.8e-11 72.0 66 57.6
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 8.0e-11 70.5 67 61.2
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 8.0e-11 70.5 59 62.7
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 1.0e-10 70.1 64 60.9
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 1.0e-10 70.1 45 73.3
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.0e-10 70.1 65 58.5
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 1.4e-10 69.7 63 60.3
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.4e-10 69.7 57 64.9
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.4e-10 69.7 57 64.9
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 1.4e-10 69.7 69 53.6
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.3e-10 68.9 64 57.8
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 2.3e-10 68.9 77 55.8
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 3.0e-10 68.6 57 63.2
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 3.0e-10 68.6 73 56.2
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 3.0e-10 68.6 62 61.3
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 3.0e-10 68.6 62 59.7
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 3.0e-10 68.6 66 60.6
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 4.0e-10 68.2 117 47.0
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 4.0e-10 68.2 117 41.0
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 5.2e-10 67.8 64 57.8
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 6.8e-10 67.4 117 46.2
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 6.8e-10 67.4 60 60.0
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 6.8e-10 67.4 64 56.2
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 6.8e-10 67.4 63 60.3
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 8.8e-10 67.0 75 56.0
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 1.2e-09 66.6 64 57.8
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.5e-09 66.2 67 58.2
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.5e-09 66.2 78 50.0
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.6e-09 65.5 67 55.2
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 2.6e-09 65.5 67 55.2
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 3.4e-09 65.1 64 56.2
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 3.4e-09 65.1 71 56.3
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 4.4e-09 64.7 67 55.2
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 5.7e-09 64.3 68 55.9
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.3e-08 63.2 59 61.0
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.3e-08 63.2 54 64.8
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 1.3e-08 63.2 68 52.9
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 1.7e-08 62.8 68 55.9
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 2.2e-08 62.4 66 51.5
C05p41370 Brassica napus HOM05D007783 ORTHO05D009740 2.8e-08 62.0 74 51.4
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 2.8e-08 62.0 56 60.7
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 4.9e-08 61.2 66 54.5
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 4.9e-08 61.2 64 51.6
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 6.3e-08 60.8 68 51.5
A01p33040 Brassica napus HOM05D007783 ORTHO05D009740 1.1e-07 60.1 53 60.4
C01p42180 Brassica napus HOM05D007783 ORTHO05D009740 1.1e-07 60.1 53 60.4
BolC1t04180H Brassica oleracea HOM05D007783 ORTHO05D009740 1.1e-07 60.1 53 60.4
BraA01t03426Z Brassica rapa HOM05D007783 ORTHO05D009740 1.1e-07 60.1 53 60.4
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 1.4e-07 59.7 65 52.3
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 1.4e-07 59.7 68 51.5
PSO210G2314 Papaver somniferum HOM05D007783 ORTHO05D009740 1.8e-07 59.3 68 48.5
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 3.1e-07 58.5 67 50.7
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 4.1e-07 58.2 63 55.6
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 5.4e-07 57.8 70 54.3
Carub.0003s2223 Capsella rubella HOM05D007783 ORTHO05D009740 5.4e-07 57.8 62 54.8
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 5.4e-07 57.8 64 54.7
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 9.2e-07 57.0 63 55.6
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 1.2e-06 56.6 66 53.0
AL3G36260 Arabidopsis lyrata HOM05D007783 ORTHO05D009740 1.6e-06 56.2 62 54.8
CARHR097930 Cardamine hirsuta HOM05D007783 ORTHO05D009740 2.0e-06 55.8 64 54.7
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 2.0e-06 55.8 68 47.1
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 2.7e-06 55.5 47 61.7
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 3.5e-06 55.1 69 50.7
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 4.5e-06 54.7 69 43.5


User provided reference genes

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