Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 3.9e-185 651.4 340 100.0
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.0e-116 422.5 339 68.4
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.0e-116 422.5 340 67.9
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 9.6e-115 417.5 342 66.4
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 2.8e-114 416.0 342 65.8
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.6e-114 415.6 345 65.2
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.4e-113 413.7 342 65.5
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 6.8e-113 411.4 345 64.6
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 1.2e-109 400.6 344 63.1
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 2.1e-109 399.8 351 64.7
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.7e-109 399.4 341 62.8
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 4.6e-109 398.7 343 62.1
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 3.9e-108 395.6 347 63.1
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 6.6e-108 394.8 345 62.3
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 5.6e-107 391.7 344 61.0
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 1.3e-106 390.6 347 61.7
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 4.8e-106 388.7 280 70.7
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 6.2e-106 388.3 355 60.6
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 8.1e-106 387.9 348 60.9
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 5.3e-105 385.2 338 62.7
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 5.3e-105 385.2 344 62.2
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.5e-104 383.6 347 61.1
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 2.0e-104 383.3 321 62.0
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.3e-103 380.6 345 60.6
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.9e-103 379.4 348 62.6
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.1e-102 377.5 342 60.5
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.9e-102 376.7 342 60.5
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.4e-102 376.3 341 59.5
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 5.4e-102 375.2 345 60.6
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 5.4e-102 375.2 345 60.0
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 5.4e-102 375.2 345 60.3
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 7.1e-102 374.8 348 59.5
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.2e-101 374.0 341 60.4
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.2e-101 374.0 304 66.8
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 1.6e-101 373.6 345 59.1
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.7e-101 372.9 343 58.6
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.7e-101 372.9 290 67.9
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 6.0e-101 371.7 304 66.4
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 7.9e-101 371.3 336 62.2
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.7e-100 370.2 342 59.9
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.3e-100 369.8 345 58.6
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 5.1e-100 368.6 335 60.6
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.1e-100 368.6 343 62.1
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 6.6e-100 368.2 283 67.1
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.1e-99 367.5 345 58.6
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.5e-99 367.1 347 57.9
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 1.5e-99 367.1 346 60.4
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.9e-99 366.7 345 57.7
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.9e-99 366.7 344 59.9
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.6e-99 365.2 329 60.2
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.6e-99 365.2 329 60.2
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 7.3e-99 364.8 347 57.3
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 9.6e-99 364.4 345 59.4
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 1.3e-98 364.0 345 58.8
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.8e-98 362.8 347 57.1
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 8.1e-98 361.3 334 59.6
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 2.4e-97 359.8 341 58.7
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.1e-97 359.4 341 58.4
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 6.9e-97 358.2 276 66.7
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.4e-96 355.9 341 58.1
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 3.4e-96 355.9 345 58.3
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 4.5e-96 355.5 341 58.1
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 4.5e-96 355.5 343 58.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 4.2e-94 349.0 280 63.9
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 7.9e-93 344.7 272 63.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 3.3e-91 339.3 315 59.0
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 4.3e-91 339.0 316 58.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.6e-90 337.0 283 61.5
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 2.2e-87 326.6 280 62.1
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 3.8e-87 325.9 283 60.4
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 3.2e-86 322.8 342 54.1
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.5e-85 319.3 290 60.7
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 8.7e-84 314.7 346 53.2
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.9e-83 313.5 352 52.8
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.9e-83 313.5 353 54.7
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 7.4e-83 311.6 353 53.3
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.3e-82 310.8 352 52.8
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.3e-82 310.8 279 58.1
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 9.0e-81 304.7 359 50.7
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.2e-80 304.3 279 57.3
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 3.4e-80 302.8 286 58.0
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 5.8e-80 302.0 332 52.1
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.0e-79 301.2 287 57.5
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.0e-79 301.2 287 57.5
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 2.9e-79 299.7 328 52.4
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 2.7e-77 293.1 329 48.6
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.4e-73 280.0 354 50.3
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 2.5e-70 270.0 268 56.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 7.9e-69 265.0 205 63.9
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 4.4e-59 232.6 352 41.8
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 8.2e-58 228.4 353 42.2
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 2.5e-54 216.9 184 59.8
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 1.6e-53 214.2 133 75.2
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 2.9e-47 193.4 281 39.9
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 6.5e-47 192.2 121 75.2
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 4.0e-44 183.0 228 49.6
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 7.7e-32 142.1 252 41.7
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 2.8e-29 133.7 269 35.3
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.6e-29 133.3 192 45.8
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.7e-29 132.9 278 33.1
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.0e-23 115.2 114 54.4
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 1.7e-23 114.4 135 43.7
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.4e-20 104.8 115 47.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.9e-17 94.4 262 29.8
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-09 68.6 99 36.4
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 3.5e-08 63.5 341 24.6


User provided reference genes

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