Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 9.0e-108 393.7 208 100.0
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 2.8e-61 239.2 217 65.0
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 5.2e-55 218.4 208 64.4
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 6.8e-55 218.0 219 61.2
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 6.8e-55 218.0 219 61.2
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.5e-54 216.9 224 58.9
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.5e-54 216.9 224 58.0
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 2.0e-54 216.5 202 62.4
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.0e-54 216.5 182 67.0
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 5.8e-54 214.9 140 81.4
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 5.8e-54 214.9 215 61.9
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.7e-53 213.4 182 66.5
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.7e-53 213.4 202 63.4
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.9e-53 212.6 185 68.1
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 3.7e-53 212.2 182 68.1
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.1e-52 210.7 213 59.6
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.1e-52 210.7 213 59.6
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 1.4e-52 210.3 206 63.1
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 1.4e-52 210.3 202 61.9
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.4e-52 210.3 206 61.2
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.9e-52 209.9 210 61.0
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.9e-52 209.9 205 62.0
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 4.1e-52 208.8 223 57.8
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 4.1e-52 208.8 213 59.6
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 7.0e-52 208.0 208 62.0
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 1.2e-51 207.2 205 62.4
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.2e-51 207.2 206 60.7
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.6e-51 206.8 176 67.0
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 2.0e-51 206.5 178 68.0
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 2.0e-51 206.5 227 59.5
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 2.7e-51 206.1 184 64.7
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 2.7e-51 206.1 221 57.5
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 3.5e-51 205.7 227 59.0
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 6.0e-51 204.9 183 64.5
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 6.0e-51 204.9 221 57.5
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 7.8e-51 204.5 178 64.6
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.8e-51 204.5 178 64.6
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 7.8e-51 204.5 202 58.9
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 1.3e-50 203.8 178 65.7
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.3e-50 203.8 212 61.3
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.3e-50 203.8 212 61.3
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.3e-50 203.8 212 61.3
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.3e-50 203.8 178 64.0
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.3e-50 203.8 182 63.7
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.3e-50 203.8 206 59.7
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-50 203.4 212 60.8
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-50 203.4 178 64.0
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.7e-50 203.4 187 63.1
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.7e-50 203.4 204 62.3
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 3.0e-50 202.6 211 59.7
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 3.0e-50 202.6 166 71.7
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 5.0e-50 201.8 200 60.0
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 8.6e-50 201.1 205 61.0
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 1.1e-49 200.7 218 56.0
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 1.9e-49 199.9 211 58.8
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.9e-49 199.9 186 61.8
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 4.3e-49 198.7 214 58.4
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 4.3e-49 198.7 176 64.2
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 4.3e-49 198.7 217 56.7
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 7.3e-49 198.0 169 67.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 9.5e-49 197.6 178 64.6
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 9.5e-49 197.6 134 77.6
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 9.5e-49 197.6 203 58.1
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 1.6e-48 196.8 204 58.3
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 1.6e-48 196.8 140 75.0
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 2.8e-48 196.1 185 61.6
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 3.6e-48 195.7 195 59.5
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 8.0e-48 194.5 202 59.4
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 1.1e-47 194.1 192 60.4
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 1.4e-47 193.7 156 69.9
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.4e-47 193.7 165 67.3
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 1.8e-47 193.4 214 56.5
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 2.3e-47 193.0 237 54.9
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 3.1e-47 192.6 214 57.5
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 3.1e-47 192.6 195 59.0
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 3.1e-47 192.6 175 65.1
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 4.0e-47 192.2 207 56.5
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 4.0e-47 192.2 204 56.9
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.2e-46 190.7 166 68.1
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 1.5e-46 190.3 198 60.1
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 3.4e-46 189.1 187 59.9
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.3e-45 187.2 185 62.7
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.3e-45 187.2 198 57.1
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 5.4e-44 181.8 148 68.9
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 3.5e-43 179.1 210 57.1
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.5e-41 172.9 152 65.1
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 9.5e-41 171.0 221 52.9
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 9.5e-41 171.0 210 52.4
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 3.6e-40 169.1 176 59.1
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 6.8e-39 164.9 141 63.8
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 1.3e-37 160.6 109 77.1
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 1.7e-34 150.2 151 58.3
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.5e-33 147.1 163 55.8
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 4.3e-33 145.6 225 50.2
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.5e-30 137.1 97 73.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 4.4e-30 135.6 105 67.6
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 5.1e-26 122.1 78 84.6
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 3.3e-25 119.4 78 83.3
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 5.3e-23 112.1 88 68.2
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 2.1e-19 100.1 147 49.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 2.7e-19 99.8 123 45.5
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.3e-18 97.4 87 60.9
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 8.7e-18 94.7 74 67.6
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 1.3e-13 80.9 91 56.0
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 1.2e-11 74.3 48 81.2
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 7.4e-09 65.1 105 36.2
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 8.1e-08 61.6 38 81.6
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 8.1e-08 61.6 38 81.6
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 9.9e-06 54.7 93 33.3


User provided reference genes

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