Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02010 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 1.9e-65 252.3 120 100.0
CiPaw.13G010100 Carya illinoinensis HOM05D002739 ORTHO05D002877 9.1e-12 73.9 115 38.3
QL04p013297 Quercus lobata HOM05D002739 ORTHO05D002877 1.2e-11 73.6 115 35.7
TAR623G0756 Trochodendron aralioides HOM05D002739 ORTHO05D002877 1.6e-11 73.2 123 36.6
QL04p013260 Quercus lobata HOM05D002739 ORTHO05D002877 3.5e-11 72.0 110 39.1
Phvul.008G271900 Phaseolus vulgaris HOM05D002739 ORTHO05D002877 4.5e-11 71.6 112 37.5
Nn7g36463 Nelumbo nucifera HOM05D002739 ORTHO05D002877 5.9e-11 71.2 124 39.5
QL04p013280 Quercus lobata HOM05D002739 ORTHO05D002877 1.0e-10 70.5 117 36.8
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 2.9e-10 68.9 123 36.6
Manes.14G006000 Manihot esculenta HOM05D002739 ORTHO05D002877 6.6e-10 67.8 117 42.7
THA.LOC104826714 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 6.6e-10 67.8 110 36.4
TWI38G1066 Tripterygium wilfordii HOM05D002739 ORTHO05D002877 1.9e-09 66.2 122 36.9
Sabra09G0035200 Salix brachista HOM05D002739 ORTHO05D002877 2.5e-09 65.9 127 39.4
Sabra09G0035300 Salix brachista HOM05D002739 ORTHO05D002877 2.5e-09 65.9 127 39.4
Sabra09G0035400 Salix brachista HOM05D002739 ORTHO05D002877 2.5e-09 65.9 115 40.0
Sabra09G0035500 Salix brachista HOM05D002739 ORTHO05D002877 2.5e-09 65.9 127 39.4
Haze_23193 Corylus avellana HOM05D002739 ORTHO05D002877 4.2e-09 65.1 127 33.9
THA.LOC104819118 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 4.2e-09 65.1 113 36.3
PSO384G3480 Papaver somniferum HOM05D002739 ORTHO05D002877 7.2e-09 64.3 111 32.4
Potri.001G023300 Populus trichocarpa HOM05D002739 ORTHO05D002877 9.5e-09 63.9 120 30.8
Prupe.2G028300 Prunus persica HOM05D002739 ORTHO05D002877 9.5e-09 63.9 113 33.6
PGR031G3191 Punica granatum HOM05D002739 ORTHO05D002877 9.5e-09 63.9 73 46.6
CSS0000269 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 1.2e-08 63.5 124 34.7
CSS0014844 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 1.2e-08 63.5 124 34.7
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.2e-08 63.5 85 41.2
SGA_v2.0_scaffold24G10703 Striga asiatica HOM05D002739 ORTHO05D002877 1.2e-08 63.5 64 46.9
CSS0046368 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 1.6e-08 63.2 64 48.4
COL.COLO4_36502 Corchorus olitorius HOM05D002739 ORTHO05D002877 1.6e-08 63.2 112 39.3
Manes.11G031500 Manihot esculenta HOM05D002739 ORTHO05D002877 1.6e-08 63.2 126 33.3
TAR623G1716 Trochodendron aralioides HOM05D002739 ORTHO05D002877 1.6e-08 63.2 117 35.0
Eucgr.G03260 Eucalyptus grandis HOM05D002739 ORTHO05D002877 2.1e-08 62.8 126 31.7
PSO339G1495 Papaver somniferum HOM05D002739 ORTHO05D002877 2.1e-08 62.8 126 32.5
PSO339G3199 Papaver somniferum HOM05D002739 ORTHO05D002877 2.1e-08 62.8 111 33.3
BcaB03g12793 Brassica carinata HOM05D002739 ORTHO05D002877 2.8e-08 62.4 64 45.3
CSS0048223 Camellia sinensis var. sinensis HOM05D002739 ORTHO05D002877 2.8e-08 62.4 124 33.9
Ciclev10017226m.g Citrus clementina HOM05D002739 ORTHO05D002877 2.8e-08 62.4 112 37.5
PGR031G2149 Punica granatum HOM05D002739 ORTHO05D002877 2.8e-08 62.4 65 47.7
Cc02_g29460 Coffea canephora HOM05D002739 ORTHO05D002877 3.6e-08 62.0 122 31.1
Thhalv10026604m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 3.6e-08 62.0 112 33.0
Aqoxy2G00284 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 4.7e-08 61.6 121 35.5
EL10Ac4g08094 Beta vulgaris HOM05D002739 ORTHO05D002877 4.7e-08 61.6 121 33.9
Manes.04G135500 Manihot esculenta HOM05D002739 ORTHO05D002877 4.7e-08 61.6 64 43.8
Nn7g36467 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.7e-08 61.6 107 34.6
PSO384G0435 Papaver somniferum HOM05D002739 ORTHO05D002877 4.7e-08 61.6 125 32.8
AT4G33550 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 6.1e-08 61.2 113 31.0
Cpa.g.sc84.11 Carica papaya HOM05D002739 ORTHO05D002877 6.1e-08 61.2 113 32.7
CARHR238780 Cardamine hirsuta HOM05D002739 ORTHO05D002877 8.0e-08 60.8 112 37.5
Glyma.04G138700 Glycine max HOM05D002739 ORTHO05D002877 8.0e-08 60.8 116 27.6
Aqoxy2G00281 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 1.0e-07 60.5 122 34.4
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 1.0e-07 60.5 113 31.9
FvH4_3g29300 Fragaria vesca HOM05D002739 ORTHO05D002877 1.0e-07 60.5 121 31.4
Lj1g0028228 Lotus japonicus HOM05D002739 ORTHO05D002877 1.0e-07 60.5 118 33.9
AL7G17970 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 1.4e-07 60.1 64 43.8
AT4G30880 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 1.4e-07 60.1 86 37.2
Dinv36202 Davidia involucrata HOM05D002739 ORTHO05D002877 1.4e-07 60.1 61 45.9
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 1.4e-07 60.1 126 32.5
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 1.4e-07 60.1 64 43.8
BcaB03g12664 Brassica carinata HOM05D002739 ORTHO05D002877 1.8e-07 59.7 87 36.8
BcaC01g00985 Brassica carinata HOM05D002739 ORTHO05D002877 1.8e-07 59.7 114 30.7
Ciclev10017233m.g Citrus clementina HOM05D002739 ORTHO05D002877 1.8e-07 59.7 121 38.0
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-07 59.7 110 30.9
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-07 59.7 110 30.9
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-07 59.7 110 30.9
FAN10G1712 Fragaria x ananassa HOM05D002739 ORTHO05D002877 2.3e-07 59.3 121 31.4
Thecc.09G243000 Theobroma cacao HOM05D002739 ORTHO05D002877 2.3e-07 59.3 114 36.0
BcaB03g12794 Brassica carinata HOM05D002739 ORTHO05D002877 3.0e-07 58.9 113 32.7
Thhalv10026851m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 3.0e-07 58.9 86 37.2
Lj4g0026950 Lotus japonicus HOM05D002739 ORTHO05D002877 3.0e-07 58.9 62 48.4
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 3.0e-07 58.9 119 37.8
QL04p013244 Quercus lobata HOM05D002739 ORTHO05D002877 3.0e-07 58.9 64 45.3
Zm00001eb138660 Zea mays HOM05D002739 ORTHO05D002877 3.0e-07 58.9 119 33.6
Atru.chr6.1312 Acer truncatum HOM05D002739 ORTHO05D002877 4.0e-07 58.5 121 32.2
ATR0721G099 Amborella trichopoda HOM05D002739 ORTHO05D002877 4.0e-07 58.5 80 40.0
Carub.0007s0967 Capsella rubella HOM05D002739 ORTHO05D002877 4.0e-07 58.5 86 37.2
Cfa009830 Carpinus fangiana HOM05D002739 ORTHO05D002877 4.0e-07 58.5 125 30.4
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 4.0e-07 58.5 62 41.9
Duzib168G0958 Durio zibethinus HOM05D002739 ORTHO05D002877 5.2e-07 58.2 119 28.6
FvH4_7g02210 Fragaria vesca HOM05D002739 ORTHO05D002877 5.2e-07 58.2 123 30.9
Nn7g36443 Nelumbo nucifera HOM05D002739 ORTHO05D002877 5.2e-07 58.2 62 43.5
Nn7g38449 Nelumbo nucifera HOM05D002739 ORTHO05D002877 5.2e-07 58.2 62 43.5
Potri.009G048900 Populus trichocarpa HOM05D002739 ORTHO05D002877 5.2e-07 58.2 114 36.8
THA.LOC104826487 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 5.2e-07 58.2 111 31.5
AL7G21220 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 6.8e-07 57.8 115 31.3
AT5G56480 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 6.8e-07 57.8 117 33.3
BcaC09g51875 Brassica carinata HOM05D002739 ORTHO05D002877 8.9e-07 57.4 86 36.0
Carub.0007s0690 Capsella rubella HOM05D002739 ORTHO05D002877 8.9e-07 57.4 112 31.2
Glyma.14G018800 Glycine max HOM05D002739 ORTHO05D002877 8.9e-07 57.4 64 42.2
MBI13_g04764_MAGBIO Magnolia biondii HOM05D002739 ORTHO05D002877 8.9e-07 57.4 116 31.9
VMungo0647G0462 Vigna mungo HOM05D002739 ORTHO05D002877 8.9e-07 57.4 63 41.3
Lj1g0024813 Lotus japonicus HOM05D002739 ORTHO05D002877 1.2e-06 57.0 62 45.2
Lj3g0013733 Lotus japonicus HOM05D018715 ORTHO05D025661 1.2e-06 57.0 67 41.8
Hund15707 Selenicereus undatus HOM05D002739 ORTHO05D002877 1.2e-06 57.0 63 44.4
arahy.Tifrunner.gnm1.ann1.7A4EFU Arachis hypogaea HOM05D018715 ORTHO05D002877 1.5e-06 56.6 67 37.3
arahy.Tifrunner.gnm1.ann1.K6R24J Arachis hypogaea HOM05D018715 ORTHO05D002877 1.5e-06 56.6 67 37.3
PSO339G0568 Papaver somniferum HOM05D002739 ORTHO05D002877 1.5e-06 56.6 64 34.4
QL04p013222 Quercus lobata HOM05D002739 ORTHO05D002877 1.5e-06 56.6 115 31.3
Aa31sc407G10 Aethionema arabicum HOM05D002739 ORTHO05D002877 2.0e-06 56.2 64 40.6
Cpa.g.sc84.10 Carica papaya HOM05D002739 ORTHO05D002877 2.0e-06 56.2 123 35.8
Lalb_Chr04g0263901 Lupinus albus HOM05D002739 ORTHO05D002877 2.0e-06 56.2 117 32.5
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 2.0e-06 56.2 116 34.5
Sp7g28750 Schrenkiella parvula HOM05D002739 ORTHO05D002877 2.0e-06 56.2 116 31.0
GSVIVG01000855001 Vitis vinifera HOM05D002739 ORTHO05D002877 2.0e-06 56.2 64 40.6
Zm00001eb419150 Zea mays HOM05D042461 ORTHO05D002877 2.0e-06 56.2 65 36.9
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 2.6e-06 55.8 62 41.9
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.6e-06 55.8 110 32.7
Nn7g36466 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.6e-06 55.8 119 33.6
PSO384G1774 Papaver somniferum HOM05D002739 ORTHO05D002877 2.6e-06 55.8 118 36.4
PSO384G3657 Papaver somniferum HOM05D002739 ORTHO05D002877 2.6e-06 55.8 118 36.4
Phvul.005G033100 Phaseolus vulgaris HOM05D002739 ORTHO05D002877 2.6e-06 55.8 106 30.2
Psat3g094440 Pisum sativum HOM05D002739 ORTHO05D002877 2.6e-06 55.8 63 44.4
PSO384G3631 Papaver somniferum HOM05D002739 ORTHO05D002877 3.4e-06 55.5 116 30.2
Zm00001eb369450 Zea mays HOM05D002739 ORTHO05D002877 3.4e-06 55.5 117 32.5
AL8G32240 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 4.4e-06 55.1 95 34.7
Migut.B01208 Erythranthe guttata HOM05D018938 ORTHO05D020591 4.4e-06 55.1 118 33.9
PSO384G1879 Papaver somniferum HOM05D002739 ORTHO05D002877 4.4e-06 55.1 62 35.5
Carub.0001s3061 Capsella rubella HOM05D002739 ORTHO05D002877 5.7e-06 54.7 113 33.6
Oeu027475.1 Olea europaea HOM05D002739 ORTHO05D002877 5.7e-06 54.7 60 43.3
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 5.7e-06 54.7 64 42.2
Aa31LG2G19500 Aethionema arabicum HOM05D002739 ORTHO05D002877 7.5e-06 54.3 81 35.8
Migut.E00760 Erythranthe guttata HOM05D018938 ORTHO05D020591 7.5e-06 54.3 68 42.6
Ciclev10017652m.g Citrus clementina HOM05D002739 ORTHO05D002877 9.8e-06 53.9 119 29.4
Nn2g15046 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.8e-06 53.9 124 30.6


User provided reference genes

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