Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 5.3e-211 737.6 391 100.0
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 2.6e-149 532.7 368 74.2
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 3.8e-148 528.9 373 72.9
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 1.9e-147 526.6 379 71.2
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 1.9e-147 526.6 374 72.7
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 2.4e-147 526.2 397 70.5
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 3.2e-147 525.8 378 71.7
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 9.3e-147 524.2 378 71.4
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 1.6e-146 523.5 368 73.1
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 1.6e-146 523.5 368 72.0
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 1.6e-146 523.5 375 72.3
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 2.1e-146 523.1 369 74.5
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 6.0e-146 521.5 369 73.4
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 7.9e-146 521.2 369 73.4
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 1.0e-145 520.8 374 72.2
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 3.0e-145 519.2 396 68.9
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 2.5e-144 516.2 378 70.6
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 7.4e-144 514.6 375 71.2
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 3.7e-143 512.3 375 70.4
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 4.8e-143 511.9 387 70.0
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 4.8e-143 511.9 368 72.3
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 8.1e-143 511.1 378 70.6
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 1.1e-142 510.8 369 72.1
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 9.0e-142 507.7 380 70.3
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 9.0e-142 507.7 370 70.0
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 4.5e-141 505.4 372 70.4
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 4.5e-141 505.4 398 67.1
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 3.8e-140 502.3 378 71.4
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 3.8e-140 502.3 375 68.8
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 3.8e-140 502.3 372 69.6
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 4.9e-140 501.9 378 69.8
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 6.4e-140 501.5 390 69.2
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 1.4e-139 500.4 368 70.1
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 1.9e-139 500.0 378 68.5
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 2.5e-139 499.6 364 70.9
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 2.5e-139 499.6 366 70.2
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 7.1e-139 498.0 390 68.7
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 1.2e-138 497.3 390 69.5
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 2.1e-138 496.5 368 69.3
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 4.6e-138 495.4 368 70.1
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 6.0e-138 495.0 371 69.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 7.9e-138 494.6 287 83.3
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 1.0e-137 494.2 406 65.8
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 2.3e-137 493.0 405 66.2
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 8.7e-137 491.1 375 69.6
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 1.1e-136 490.7 365 70.4
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 3.3e-136 489.2 378 68.3
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 7.4e-136 488.0 375 69.6
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 7.4e-136 488.0 410 64.6
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 2.8e-135 486.1 371 66.6
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 3.7e-135 485.7 369 68.3
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 3.7e-135 485.7 287 82.6
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 6.2e-135 485.0 367 66.8
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 8.2e-135 484.6 378 65.3
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 1.8e-134 483.4 379 66.0
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 6.9e-134 481.5 390 65.1
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 6.9e-134 481.5 368 68.5
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 1.2e-133 480.7 378 67.7
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 1.5e-133 480.3 369 67.2
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 1.5e-133 480.3 369 66.7
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 4.5e-133 478.8 369 67.2
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 2.2e-132 476.5 363 68.0
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 2.2e-132 476.5 366 67.2
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 2.9e-132 476.1 287 80.8
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 3.8e-132 475.7 369 67.8
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 4.9e-132 475.3 366 66.9
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 4.9e-132 475.3 366 67.2
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 6.5e-132 474.9 375 66.7
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 1.1e-131 474.2 369 66.9
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 3.2e-131 472.6 293 78.8
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 4.2e-131 472.2 375 66.1
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 5.5e-131 471.9 368 66.0
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 7.9e-130 468.0 375 64.8
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 1.0e-129 467.6 375 64.5
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.0e-129 466.1 368 65.5
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.0e-129 466.1 368 65.5
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 5.1e-129 465.3 375 65.1
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 5.1e-129 465.3 374 64.7
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 5.1e-129 465.3 368 65.5
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 6.7e-129 464.9 380 66.6
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 8.7e-129 464.5 291 76.6
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 6.3e-127 458.4 373 63.5
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 1.4e-126 457.2 368 67.7
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 1.8e-126 456.8 367 65.1
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 5.3e-126 455.3 368 66.3
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 1.3e-124 450.7 367 65.4
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 1.7e-124 450.3 369 62.3
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 6.5e-124 448.4 375 63.7
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 1.9e-123 446.8 377 61.3
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 3.6e-122 442.6 368 63.9
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 6.7e-121 438.3 368 62.8
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 8.8e-121 438.0 287 77.0
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.5e-120 437.2 341 66.9
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 4.3e-120 435.6 366 62.8
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 2.2e-119 433.3 366 62.0
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 3.7e-119 432.6 374 62.0
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 1.1e-118 431.0 367 62.4
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 1.8e-118 430.3 368 62.5
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 3.1e-118 429.5 392 60.2
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 6.9e-118 428.3 372 61.6
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 6.9e-118 428.3 348 66.1
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 9.1e-118 427.9 368 62.5
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 1.5e-117 427.2 367 62.4
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.0e-117 426.8 486 51.9
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 3.4e-117 426.0 364 62.4
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 3.4e-117 426.0 376 58.0
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 4.5e-117 425.6 374 61.2
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 5.9e-117 425.2 369 62.6
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 5.9e-117 425.2 369 62.6
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 1.1e-115 421.0 369 62.3
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 9.4e-115 417.9 376 60.9
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 3.6e-114 416.0 376 61.7
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 4.7e-114 415.6 364 56.3
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 7.9e-114 414.8 376 60.4
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 5.1e-113 412.1 373 60.6
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 6.7e-113 411.8 369 61.2
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 8.8e-113 411.4 372 61.3
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 1.5e-112 410.6 378 59.5
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 1.5e-112 410.6 369 61.2
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 4.4e-112 409.1 369 61.0
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 7.4e-112 408.3 362 60.8
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 1.7e-111 407.1 285 70.2
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 2.2e-111 406.8 371 62.8
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 4.8e-111 405.6 290 64.5
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.1e-110 404.4 351 61.5
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 1.4e-110 404.1 340 62.9
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 7.0e-110 401.7 370 60.3
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 7.0e-110 401.7 370 60.3
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 9.1e-110 401.4 388 58.8
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 2.0e-109 400.2 287 72.5
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 3.5e-109 399.4 369 60.4
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 3.5e-109 399.4 369 60.4
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 1.3e-108 397.5 370 59.7
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 4.2e-99 365.9 293 65.9
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 4.2e-99 365.9 368 56.2
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 1.0e-97 361.3 342 54.4
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 1.5e-91 340.9 405 46.7
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.2e-90 337.8 251 68.9
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 1.2e-74 284.6 160 85.6
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 1.6e-58 231.1 283 43.8
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 4.4e-56 223.0 171 66.7
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 1.1e-54 218.4 292 41.4
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 3.5e-53 213.4 160 66.9
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 1.1e-46 191.8 259 44.8
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 2.9e-39 167.2 248 45.6
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 3.8e-31 140.2 189 45.5
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 4.5e-24 116.7 173 43.9
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 7.1e-22 109.4 72 69.4
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 4.6e-21 106.7 117 53.0
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 3.1e-17 94.0 116 50.9
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 2.6e-16 90.9 276 25.7
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 1.9e-14 84.7 56 71.4
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 1.9e-11 74.7 114 41.2


User provided reference genes

Program Settings