Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01986 Aquilegia oxysepala HOM05D004126 ORTHO05D004818 1.3e-97 359.8 186 100.0
EL10Ac9g23026 Beta vulgaris HOM05D004126 ORTHO05D004818 1.7e-17 93.6 58 75.9
Aqoxy3G03824 Aquilegia oxysepala HOM05D004126 ORTHO05D004818 1.9e-16 90.1 58 74.1
vmacro14365 Vaccinium macrocarpon HOM05D004126 ORTHO05D004818 2.1e-15 86.7 50 76.0
SGA_v2.0_scaffold83G26418 Striga asiatica HOM05D004126 ORTHO05D004818 2.8e-15 86.3 53 77.4
Ciclev10029753m.g Citrus clementina HOM05D004126 ORTHO05D004818 3.6e-15 85.9 54 74.1
Cc01_g09610 Coffea canephora HOM05D004126 ORTHO05D004818 8.0e-15 84.7 51 72.5
Migut.D02341 Erythranthe guttata HOM05D004126 ORTHO05D004818 8.0e-15 84.7 50 80.0
THA.LOC109117263 Tarenaya hassleriana HOM05D004126 ORTHO05D004818 1.0e-14 84.3 44 86.4
ECA233G1451 Erigeron canadensis HOM05D004126 ORTHO05D004818 1.4e-14 84.0 55 74.5
Sed0026235 Sechium edule HOM05D004126 ORTHO05D004818 1.4e-14 84.0 51 74.5
Glyma.12G182500 Glycine max HOM05D004126 ORTHO05D004818 1.8e-14 83.6 51 76.5
AUR62029880 Chenopodium quinoa HOM05D004126 ORTHO05D004818 2.3e-14 83.2 55 72.7
ClCG02G021990 Citrullus lanatus HOM05D004126 ORTHO05D004818 2.3e-14 83.2 54 70.4
Lalb_Chr03g0027971 Lupinus albus HOM05D004126 ORTHO05D004818 2.3e-14 83.2 47 76.6
PGR119G0779 Punica granatum HOM05D004126 ORTHO05D004818 2.3e-14 83.2 51 74.5
Aa31LG6G3140 Aethionema arabicum HOM05D003300 ORTHO05D003731 3.1e-14 82.8 44 84.1
CiPaw.14G102800 Carya illinoinensis HOM05D004126 ORTHO05D004818 3.1e-14 82.8 51 76.5
AUR62003964 Chenopodium quinoa HOM05D004126 ORTHO05D004818 3.1e-14 82.8 54 74.1
MELO3C021444.2 Cucumis melo HOM05D004126 ORTHO05D004818 3.1e-14 82.8 52 75.0
Dinv29439 Davidia involucrata HOM05D004126 ORTHO05D004818 3.1e-14 82.8 51 74.5
Ah.07g202810 Amaranthus hybridus HOM05D004126 ORTHO05D004818 4.0e-14 82.4 58 67.2
ClCG02G021980 Citrullus lanatus HOM05D004126 ORTHO05D004818 4.0e-14 82.4 55 74.5
MELO3C021443.2 Cucumis melo HOM05D004126 ORTHO05D004818 4.0e-14 82.4 54 68.5
Potri.001G460200 Populus trichocarpa HOM05D004126 ORTHO05D004818 4.0e-14 82.4 51 76.5
Rhsim10G0039800 Rhododendron simsii HOM05D004126 ORTHO05D004818 4.0e-14 82.4 54 72.2
Actinidia35453 Actinidia chinensis HOM05D004126 ORTHO05D004818 5.2e-14 82.0 51 74.5
arahy.Tifrunner.gnm1.ann1.M99YM4 Arachis hypogaea HOM05D004126 ORTHO05D004818 5.2e-14 82.0 46 78.3
AUR62025834 Chenopodium quinoa HOM05D004126 ORTHO05D004818 6.8e-14 81.6 54 72.2
CsaV3_6G014810 Cucumis sativus L. HOM05D004126 ORTHO05D004818 6.8e-14 81.6 55 67.3
Phvul.011G091700 Phaseolus vulgaris HOM05D004126 ORTHO05D004818 6.8e-14 81.6 45 80.0
SalBow3G0427 Salvia bowleyana HOM05D004126 ORTHO05D004818 6.8e-14 81.6 56 75.0
Sp7g19190 Schrenkiella parvula HOM05D004126 ORTHO05D004818 6.8e-14 81.6 44 84.1
Actinidia07223 Actinidia chinensis HOM05D004126 ORTHO05D004818 8.9e-14 81.3 51 74.5
BcaC09g51261 Brassica carinata HOM05D004126 ORTHO05D004818 8.9e-14 81.3 44 81.8
C01p15030 Brassica napus HOM05D004126 ORTHO05D004818 8.9e-14 81.3 44 81.8
BolC1t01452H Brassica oleracea HOM05D004126 ORTHO05D004818 8.9e-14 81.3 44 81.8
arahy.Tifrunner.gnm1.ann1.A0MYZQ Arachis hypogaea HOM05D004126 ORTHO05D004818 1.2e-13 80.9 46 76.1
arahy.Tifrunner.gnm1.ann1.IBK94M Arachis hypogaea HOM05D004126 ORTHO05D004818 1.2e-13 80.9 46 76.1
Glyma.12G086600 Glycine max HOM05D004126 ORTHO05D004818 1.2e-13 80.9 46 76.1
Potri.011G156400 Populus trichocarpa HOM05D004126 ORTHO05D004818 1.2e-13 80.9 44 84.1
arahy.Tifrunner.gnm1.ann1.S740RW Arachis hypogaea HOM05D004126 ORTHO05D004818 1.5e-13 80.5 46 76.1
C07p51070 Brassica napus HOM05D004126 ORTHO05D004818 1.5e-13 80.5 49 75.5
BraA01t01191Z Brassica rapa HOM05D004126 ORTHO05D004818 1.5e-13 80.5 44 81.8
CARHR227690 Cardamine hirsuta HOM05D004126 ORTHO05D004818 1.5e-13 80.5 44 79.5
ECA248G1359 Erigeron canadensis HOM05D004126 ORTHO05D004818 1.5e-13 80.5 50 74.0
Thhalv10026571m.g Eutrema salsugineum HOM05D004126 ORTHO05D004818 1.5e-13 80.5 44 79.5
CSS0041849 Camellia sinensis var. sinensis HOM05D004126 ORTHO05D004818 2.0e-13 80.1 54 70.4
Sabra16G0311900 Salix brachista HOM05D004126 ORTHO05D004818 2.0e-13 80.1 51 72.5
Glyma.11G187900 Glycine max HOM05D004126 ORTHO05D004818 2.6e-13 79.7 46 73.9
PSO384G3267 Papaver somniferum HOM05D004126 ORTHO05D004818 2.6e-13 79.7 54 66.7
A01p12450 Brassica napus HOM05D004126 ORTHO05D004818 3.4e-13 79.3 49 73.5
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 3.4e-13 79.3 51 72.5
MBI14_g32122_MAGBIO Magnolia biondii HOM05D004126 ORTHO05D010914 3.4e-13 79.3 51 70.6
THA.LOC104800546 Tarenaya hassleriana HOM05D004126 ORTHO05D004818 3.4e-13 79.3 44 79.5
CANSAT54G1468 Cannabis sativa HOM05D004126 ORTHO05D004818 4.4e-13 79.0 51 70.6
Haze_23434 Corylus avellana HOM05D004126 ORTHO05D004818 4.4e-13 79.0 52 73.1
DCAR_012178 Daucus carota HOM05D004126 ORTHO05D004818 4.4e-13 79.0 46 76.1
PGR102G0539 Punica granatum HOM05D004126 ORTHO05D004818 4.4e-13 79.0 49 73.5
Sed0008155 Sechium edule HOM05D004126 ORTHO05D004818 4.4e-13 79.0 51 72.5
GSVIVG01031376001 Vitis vinifera HOM05D004126 ORTHO05D004818 4.4e-13 79.0 51 72.5
BcaC01g00715 Brassica carinata HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
BcaNung06968 Brassica carinata HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
A08p15270 Brassica napus HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
C03p83510 Brassica napus HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
BolC7t45607H Brassica oleracea HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
BraA03t14337Z Brassica rapa HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
BraA08t33505Z Brassica rapa HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
Carub.0007s2032 Capsella rubella HOM05D004126 ORTHO05D004818 5.8e-13 78.6 44 81.8
Medtr4g101930 Medicago truncatula HOM05D004126 ORTHO05D004818 5.8e-13 78.6 52 71.2
FAN16G2018 Fragaria x ananassa HOM05D004126 ORTHO05D004818 7.5e-13 78.2 51 72.5
FAN21G0712 Fragaria x ananassa HOM05D004126 ORTHO05D004818 7.5e-13 78.2 51 72.5
FAN25G0231 Fragaria x ananassa HOM05D004126 ORTHO05D004818 7.5e-13 78.2 51 72.5
Psat5g255840 Pisum sativum HOM05D004126 ORTHO05D004818 7.5e-13 78.2 54 70.4
ATR1136G081 Amborella trichopoda HOM05D004126 ORTHO05D004818 9.8e-13 77.8 51 66.7
Eucgr.B03883 Eucalyptus grandis HOM05D004126 ORTHO05D004818 9.8e-13 77.8 49 73.5
QL01p013387 Quercus lobata HOM05D004126 ORTHO05D004818 9.8e-13 77.8 51 70.6
AL7G33020 Arabidopsis lyrata HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 77.3
AT4G21105 Arabidopsis thaliana HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 77.3
BcaC01g00712 Brassica carinata HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 79.5
BolC3t20632H Brassica oleracea HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 79.5
Eucgr.J00455 Eucalyptus grandis HOM05D004126 ORTHO05D004818 1.3e-12 77.4 51 70.6
Glyma.13G318450 Glycine max HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 75.0
Lalb_Chr19g0136701 Lupinus albus HOM05D004126 ORTHO05D004818 1.3e-12 77.4 44 77.3
RcHm_v2.0_Chr5g0055141 Rosa chinensis HOM05D004126 ORTHO05D004818 1.3e-12 77.4 51 70.6
HanXRQChr01g0019701 Helianthus annuus HOM05D004126 ORTHO05D004818 1.7e-12 77.0 50 72.0
Lsat_1_v5_gn_1_62101 Lactuca sativa HOM05D004126 ORTHO05D004818 1.7e-12 77.0 50 72.0
Nn2g13476 Nelumbo nucifera HOM05D004126 ORTHO05D004818 1.7e-12 77.0 54 66.7
Prupe.6G122400 Prunus persica HOM05D004126 ORTHO05D004818 1.7e-12 77.0 54 72.2
Atru.chr3.3354 Acer truncatum HOM05D004126 ORTHO05D004818 2.2e-12 76.6 54 66.7
Duzib150G0214 Durio zibethinus HOM05D004126 ORTHO05D004818 2.2e-12 76.6 43 76.7
Gohir.D08G014300 Gossypium hirsutum HOM05D004126 ORTHO05D004818 2.2e-12 76.6 51 70.6
Gorai.004G008700 Gossypium raimondii HOM05D004126 ORTHO05D004818 2.2e-12 76.6 51 70.6
Lalb_Chr24g0395191 Lupinus albus HOM05D004126 ORTHO05D004818 2.2e-12 76.6 46 73.9
Manes.11G159200 Manihot esculenta HOM05D004126 ORTHO05D004818 2.2e-12 76.6 59 59.3
Medtr2g085045 Medicago truncatula HOM05D004126 ORTHO05D004818 2.2e-12 76.6 54 66.7
Oeu050197.1 Olea europaea HOM05D004126 ORTHO05D004818 2.2e-12 76.6 46 73.9
Peaxi162Scf00114g00210 Petunia axillaris HOM05D004126 ORTHO05D004818 2.2e-12 76.6 49 71.4
MSTRG.12360 Avicennia marina HOM05D004126 ORTHO05D004818 2.9e-12 76.3 44 75.0
HanXRQChr04g0094651 Helianthus annuus HOM05D004126 ORTHO05D004818 3.7e-12 75.9 43 79.1
Manes.04G007100 Manihot esculenta HOM05D004126 ORTHO05D004818 3.7e-12 75.9 44 77.3
Nitab4.5_0006735g0040 Nicotiana tabacum HOM05D004126 ORTHO05D004818 3.7e-12 75.9 54 61.1
TPR.G23418 Trifolium pratense HOM05D004126 ORTHO05D004818 3.7e-12 75.9 54 68.5
A03p52630 Brassica napus HOM05D004126 ORTHO05D004818 4.9e-12 75.5 44 79.5
Medtr4g053330 Medicago truncatula HOM05D004126 ORTHO05D004818 4.9e-12 75.5 52 69.2
SEGI_11030 Sequoiadendron giganteum HOM05D004126 ORTHO05D004818 4.9e-12 75.5 52 63.5
Gohir.D08G014400 Gossypium hirsutum HOM05D004126 ORTHO05D004818 6.4e-12 75.1 51 68.6
Gorai.004G008800 Gossypium raimondii HOM05D004126 ORTHO05D004818 6.4e-12 75.1 51 68.6
MD11G1159300 Malus domestica HOM05D004126 ORTHO05D004818 6.4e-12 75.1 51 68.6
Oeu035542.1 Olea europaea HOM05D004126 ORTHO05D004818 6.4e-12 75.1 44 75.0
Phvul.005G126200 Phaseolus vulgaris HOM05D004126 ORTHO05D004818 6.4e-12 75.1 51 66.7
TPR.G28100 Trifolium pratense HOM05D004126 ORTHO05D004818 6.4e-12 75.1 51 70.6
TAR636G2319 Trochodendron aralioides HOM05D004126 ORTHO05D004818 6.4e-12 75.1 52 65.4
MD03G1165300 Malus domestica HOM05D004126 ORTHO05D004818 8.3e-12 74.7 51 68.6
Nitab4.5_0009196g0030 Nicotiana tabacum HOM05D004126 ORTHO05D004818 8.3e-12 74.7 50 72.0
Nitab4.5_0003082g0050 Nicotiana tabacum HOM05D004126 ORTHO05D004818 1.1e-11 74.3 49 73.5
Nitab4.5_0004070g0040 Nicotiana tabacum HOM05D004126 ORTHO05D004818 1.1e-11 74.3 51 62.7
Sopen06g030950 Solanum pennellii HOM05D004126 ORTHO05D004818 1.1e-11 74.3 47 74.5
ECA238G2243 Erigeron canadensis HOM05D004126 ORTHO05D004818 1.4e-11 73.9 47 70.2
Lsat_1_v5_gn_2_95660 Lactuca sativa HOM05D004126 ORTHO05D004818 1.4e-11 73.9 43 74.4
Gohir.A03G116500 Gossypium hirsutum HOM05D004126 ORTHO05D004818 1.9e-11 73.6 52 67.3
Hma1.2p1_0695F.1_g204510 Hydrangea macrophylla HOM05D004126 ORTHO05D004818 1.9e-11 73.6 51 68.6
Psat4g069800 Pisum sativum HOM05D004126 ORTHO05D004818 1.9e-11 73.6 52 69.2
Hund13926 Selenicereus undatus HOM05D004126 ORTHO05D004818 1.9e-11 73.6 49 65.3
TPR.G37632 Trifolium pratense HOM05D004126 ORTHO05D004818 1.9e-11 73.6 52 65.4
arahy.Tifrunner.gnm1.ann1.A24RK9 Arachis hypogaea HOM05D004126 ORTHO05D004818 3.2e-11 72.8 46 69.6
Peaxi162Scf01284g00022 Petunia axillaris HOM05D004126 ORTHO05D004818 3.2e-11 72.8 46 67.4
CAN.G644.16 Capsicum annuum HOM05D004126 ORTHO05D004818 4.1e-11 72.4 51 60.8
PGSC0003DMG400007147 Solanum tuberosum HOM05D004126 ORTHO05D004818 4.1e-11 72.4 47 72.3
CSS0047176 Camellia sinensis var. sinensis HOM05D004126 ORTHO05D004818 5.4e-11 72.0 51 62.7
Ca_01671_v3 Cicer arietinum L. HOM05D004126 ORTHO05D004818 5.4e-11 72.0 44 72.7
Lj3g0019761 Lotus japonicus HOM05D004126 ORTHO05D004818 5.4e-11 72.0 44 72.7
Thecc.09G289400 Theobroma cacao HOM05D004126 ORTHO05D004818 5.4e-11 72.0 51 66.7
TWI12G1250 Tripterygium wilfordii HOM05D004126 ORTHO05D004818 5.4e-11 72.0 50 70.0
Duzib170G0121 Durio zibethinus HOM05D004126 ORTHO05D004818 7.0e-11 71.6 51 66.7
CAN.G919.11 Capsicum annuum HOM05D004126 ORTHO05D004818 9.2e-11 71.2 47 70.2
Sopen11g026730 Solanum pennellii HOM05D004126 ORTHO05D004818 9.2e-11 71.2 52 59.6
C08p30760 Brassica napus HOM05D004126 ORTHO05D004818 1.2e-10 70.9 44 77.3
Lj3g0005404 Lotus japonicus HOM05D004126 ORTHO05D004818 1.2e-10 70.9 46 71.7
PGSC0003DMG400026528 Solanum tuberosum HOM05D004126 ORTHO05D004818 1.2e-10 70.9 51 60.8
unitig_8.g3289 Utricularia gibba HOM05D004126 ORTHO05D004818 1.2e-10 70.9 44 70.5
Gohir.A08G004000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 2.0e-10 70.1 51 66.7
Nn2g13477 Nelumbo nucifera HOM05D004126 ORTHO05D004818 2.0e-10 70.1 51 64.7
Os05g0457000 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 2.0e-10 70.1 54 61.1
Sopen03g017380 Solanum pennellii HOM05D004126 ORTHO05D004818 2.0e-10 70.1 48 66.7
unitig_22.g6645 Utricularia gibba HOM05D004126 ORTHO05D004818 2.0e-10 70.1 43 69.8
Migut.N02508 Erythranthe guttata HOM05D004126 ORTHO05D004818 3.5e-10 69.3 44 70.5
Gohir.A08G004100 Gossypium hirsutum HOM05D004126 ORTHO05D004818 3.5e-10 69.3 51 66.7
Nn2g11232 Nelumbo nucifera HOM05D004126 ORTHO05D004818 4.6e-10 68.9 51 62.7
PSO384G1920 Papaver somniferum HOM05D004126 ORTHO05D004818 6.0e-10 68.6 53 66.0
Gohir.A05G083000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 7.8e-10 68.2 46 67.4
Gohir.D05G086000 Gossypium hirsutum HOM05D004126 ORTHO05D004818 7.8e-10 68.2 46 67.4
Gorai.009G087600 Gossypium raimondii HOM05D004126 ORTHO05D004818 7.8e-10 68.2 46 67.4
Sc10g0010310 Simmondsia chinensis HOM05D004126 ORTHO05D004818 1.0e-09 67.8 44 65.9
Os07g0647500 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 1.3e-09 67.4 46 69.6
HPP92_018131 Vanilla planifolia HOM05D004126 ORTHO05D004818 1.7e-09 67.0 51 62.7
Zm00001eb351210 Zea mays HOM05D004126 ORTHO05D004818 2.3e-09 66.6 53 60.4
Lsat_1_v5_gn_6_39460 Lactuca sativa HOM05D004126 ORTHO05D004818 3.0e-09 66.2 43 69.8
Zm00001eb329410 Zea mays HOM05D004126 ORTHO05D004818 3.9e-09 65.9 44 68.2
BcaC07g41056 Brassica carinata HOM05D004126 ORTHO05D004818 5.0e-09 65.5 49 67.3
Os02g0162000 Oryza sativa ssp. japonica HOM05D004126 ORTHO05D004818 5.0e-09 65.5 44 68.2
BcaB02g06868 Brassica carinata HOM05D004126 ORTHO05D004818 3.3e-08 62.8 34 76.5
CDE04G1551 Ceratophyllum demersum HOM05D004126 ORTHO05D004818 3.3e-08 62.8 68 48.5
Zm00001eb110520 Zea mays HOM05D004126 ORTHO05D004818 3.3e-08 62.8 44 68.2
CDE02G2464 Ceratophyllum demersum HOM05D004126 ORTHO05D004818 3.6e-07 59.3 68 45.6


User provided reference genes

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