Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.6e-189 666.0 346 100.0
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.0e-145 518.5 346 75.1
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 5.5e-142 508.1 336 76.2
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 3.5e-141 505.4 336 75.9
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 9.7e-139 497.3 346 73.4
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.3e-135 486.9 343 70.3
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 4.8e-130 468.4 345 69.6
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 8.2e-130 467.6 349 69.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 5.3e-129 464.9 338 69.8
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.5e-128 463.4 343 68.2
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.0e-128 463.0 342 69.3
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 5.9e-128 461.5 329 69.9
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.9e-128 461.5 338 68.6
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.0e-127 460.7 339 69.0
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.7e-127 459.9 345 69.9
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 3.8e-127 458.8 345 69.0
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.9e-126 456.4 337 66.8
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 4.2e-126 455.3 339 67.3
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.6e-125 453.4 337 67.4
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 2.7e-125 452.6 338 68.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 3.6e-125 452.2 320 69.7
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 2.3e-124 449.5 346 65.6
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 6.7e-124 448.0 337 66.8
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 6.7e-124 448.0 347 66.3
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 8.8e-124 447.6 341 67.7
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.1e-123 447.2 332 67.8
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.5e-123 446.8 341 67.7
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.6e-123 446.0 331 69.2
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 9.7e-123 444.1 319 69.3
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 3.7e-122 442.2 315 71.4
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 3.4e-120 435.6 331 68.6
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 5.9e-120 434.9 317 65.3
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.3e-119 433.7 344 62.8
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.3e-119 433.7 337 67.4
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.3e-119 433.7 335 66.6
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.7e-119 433.3 351 63.2
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 2.2e-119 433.0 320 67.2
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 3.8e-119 432.2 331 68.3
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 5.0e-119 431.8 335 63.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 5.0e-119 431.8 332 66.3
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 6.5e-119 431.4 314 68.8
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 8.5e-119 431.0 314 69.4
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 8.5e-119 431.0 314 69.4
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.4e-118 430.3 347 62.0
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.9e-118 429.9 329 64.4
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.5e-118 429.5 313 66.5
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 7.2e-118 427.9 337 67.1
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 9.4e-118 427.6 337 65.0
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.2e-117 427.2 332 65.7
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.2e-117 427.2 318 67.6
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.1e-117 426.4 346 62.7
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.7e-117 426.0 315 68.9
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 3.6e-117 425.6 344 64.2
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 8.0e-117 424.5 329 66.0
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.0e-116 424.1 337 64.7
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.4e-116 423.7 312 66.3
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.8e-116 423.3 312 66.3
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 3.0e-116 422.5 339 64.3
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 3.0e-116 422.5 339 64.3
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.9e-116 422.2 347 61.4
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.2e-116 421.8 340 63.2
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.2e-116 421.8 340 62.4
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 9.7e-115 417.5 346 61.3
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.3e-114 417.2 346 62.1
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.7e-114 416.8 343 63.6
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 2.2e-114 416.4 339 62.5
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 2.8e-114 416.0 339 62.5
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 2.8e-114 416.0 339 62.5
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 6.3e-114 414.8 310 66.5
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 6.3e-114 414.8 310 66.5
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 6.3e-114 414.8 310 66.5
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 6.3e-114 414.8 338 63.3
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 8.2e-114 414.5 315 64.8
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.8e-113 413.3 325 66.2
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.8e-113 413.3 340 63.2
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.1e-113 412.5 312 67.6
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 5.3e-113 411.8 326 63.8
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 9.1e-113 411.0 335 60.9
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.7e-111 406.8 337 61.4
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 2.9e-111 406.0 327 64.2
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 5.0e-111 405.2 334 63.5
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 8.5e-111 404.4 334 63.2
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.2e-109 400.6 335 62.1
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.6e-109 400.2 334 60.5
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 2.7e-109 399.4 336 61.9
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 3.6e-109 399.1 278 71.2
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 5.2e-108 395.2 332 60.8
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 8.8e-108 394.4 334 60.2
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 8.8e-108 394.4 311 64.3
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.2e-107 394.0 319 61.8
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.1e-105 387.5 337 62.3
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.8e-105 386.7 338 57.7
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.8e-105 386.7 338 57.7
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.0e-104 383.3 338 61.8
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 5.9e-104 381.7 344 58.4
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.3e-103 380.6 331 57.7
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 2.5e-102 376.3 340 56.8
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 7.2e-102 374.8 316 59.2
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.7e-101 372.9 330 59.1
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 2.3e-100 369.8 289 64.4
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.3e-100 369.8 334 57.2
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 4.0e-100 369.0 332 56.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 8.8e-100 367.9 348 56.6
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.3e-98 364.0 333 55.9
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 6.3e-98 361.7 338 58.6
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 4.1e-97 359.0 341 54.3
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 7.0e-97 358.2 254 69.3
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 9.1e-97 357.8 315 57.1
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.3e-95 353.2 273 65.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 2.9e-95 352.8 309 60.2
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.1e-94 350.9 335 54.6
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.5e-94 349.7 331 52.6
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.3e-94 349.4 335 53.1
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.3e-94 349.4 314 56.1
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.3e-94 349.4 330 56.1
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 1.8e-92 343.6 316 54.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 9.8e-91 337.8 318 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.8e-90 336.3 317 51.7
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 8.3e-90 334.7 401 47.1
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.4e-89 332.0 334 50.9
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.9e-88 328.6 317 51.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 2.9e-87 326.2 334 49.7
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 5.0e-87 325.5 334 50.3
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 6.6e-87 325.1 323 54.8
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.9e-86 323.6 334 49.4
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 4.3e-86 322.4 346 49.7
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 4.3e-86 322.4 337 50.4
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 4.3e-86 322.4 302 55.6
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.8e-85 319.7 339 50.7
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.0e-84 315.8 332 51.8
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 2.6e-83 313.2 334 52.1
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 3.4e-83 312.8 334 51.2
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 4.4e-83 312.4 257 64.6
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 2.2e-82 310.1 335 49.0
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.2e-82 310.1 333 48.9
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 2.9e-82 309.7 315 50.5
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 6.4e-82 308.5 335 49.0
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 8.3e-82 308.1 315 49.5
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 1.4e-81 307.4 264 57.2
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 9.2e-81 304.7 336 49.7
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.9e-78 297.0 272 55.9
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 3.3e-78 296.2 273 55.3
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 4.3e-78 295.8 337 47.8
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 4.3e-78 295.8 337 47.8
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.2e-77 294.3 177 78.0
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.7e-77 292.4 243 59.7
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 4.0e-76 289.3 190 72.6
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.6e-75 286.6 281 54.8
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 1.3e-74 284.3 190 71.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 6.0e-72 275.4 189 68.8
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.0e-71 274.6 189 67.7
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 3.9e-71 272.7 321 47.4
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.9e-66 255.8 189 62.4
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-64 250.8 183 65.6
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.4e-57 227.6 190 58.9
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 1.6e-56 224.2 340 40.3
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 2.1e-56 223.8 224 55.4
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.0e-56 222.2 184 58.2
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.4e-49 201.1 233 47.6
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.6e-48 197.6 225 49.3
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.6e-48 197.6 324 39.2
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 3.5e-48 196.4 157 65.6
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-38 164.9 172 50.6
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 6.4e-34 149.1 160 54.4
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 1.0e-31 141.7 92 71.7
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 2.3e-31 140.6 89 73.0
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 3.9e-31 139.8 162 50.0
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 8.7e-31 138.7 104 67.3
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 3.1e-28 130.2 337 30.6
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 4.0e-28 129.8 94 64.9
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 2.7e-24 117.1 75 72.0
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 2.5e-22 110.5 81 61.7
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 9.7e-22 108.6 80 65.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 3.4e-19 100.1 76 60.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 4.6e-16 89.7 75 61.3
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 2.8e-13 80.5 48 77.1
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 4.1e-12 76.6 67 59.7
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 5.3e-12 76.3 57 61.4
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.0e-10 72.0 73 54.8
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 3.2e-09 67.0 54 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.2e-08 65.1 69 46.4


User provided reference genes

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