Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 3.1e-55 218.4 107 100.0
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.2e-19 100.1 104 54.8
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 5.4e-15 84.7 78 57.7
Cfa021889 Carpinus fangiana HOM05D006736 ORTHO05D008459 9.2e-15 84.0 78 57.7
Thecc.07G008000 Theobroma cacao HOM05D006736 ORTHO05D008459 1.7e-13 79.7 78 60.3
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 2.3e-13 79.3 88 51.1
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 3.0e-13 79.0 73 50.7
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 3.9e-13 78.6 85 50.6
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 8.6e-13 77.4 97 45.4
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 1.1e-12 77.0 90 52.2
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 3.3e-12 75.5 101 43.6
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 4.3e-12 75.1 86 50.0
ClCG10G003900 Citrullus lanatus HOM05D006736 ORTHO05D008459 5.6e-12 74.7 78 53.8
ClCG10G004060 Citrullus lanatus HOM05D006736 ORTHO05D008459 5.6e-12 74.7 78 53.8
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 5.6e-12 74.7 86 51.2
ClCG09G021530 Citrullus lanatus HOM05D006736 ORTHO05D008459 1.2e-11 73.6 80 52.5
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 1.6e-11 73.2 76 55.3
MELO3C024968.2 Cucumis melo HOM05D006736 ORTHO05D008459 2.8e-11 72.4 78 47.4
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 2.8e-11 72.4 77 57.1
CiPaw.11G206800 Carya illinoinensis HOM05D006736 ORTHO05D008459 3.6e-11 72.0 88 47.7
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 3.6e-11 72.0 84 52.4
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 3.6e-11 72.0 80 47.5
TWI38G1827 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 3.6e-11 72.0 118 43.2
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 4.7e-11 71.6 78 55.1
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 4.7e-11 71.6 77 57.1
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 6.2e-11 71.2 76 47.4
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 6.2e-11 71.2 91 47.3
TWI39G1297 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 6.2e-11 71.2 123 41.5
CsaV3_3G003890 Cucumis sativus L. HOM05D006736 ORTHO05D008459 8.1e-11 70.9 79 51.9
Duzib268G0079 Durio zibethinus HOM05D006736 ORTHO05D008459 8.1e-11 70.9 93 50.5
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 8.1e-11 70.9 97 38.1
MELO3C014070.2 Cucumis melo HOM05D006736 ORTHO05D008459 1.1e-10 70.5 79 50.6
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 1.1e-10 70.5 87 48.3
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 1.4e-10 70.1 70 52.9
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 1.4e-10 70.1 86 53.5
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 1.8e-10 69.7 100 44.0
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 1.8e-10 69.7 80 45.0
FvH4_3g42280 Fragaria vesca HOM05D006736 ORTHO05D008459 4.0e-10 68.6 109 45.0
FAN11G0661 Fragaria x ananassa HOM05D006736 ORTHO05D008459 4.0e-10 68.6 109 45.0
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 4.0e-10 68.6 109 45.0
FAN25G3397 Fragaria x ananassa HOM05D006736 ORTHO05D008459 4.0e-10 68.6 109 45.0
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 4.0e-10 68.6 114 36.8
CSS0048788 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 5.2e-10 68.2 107 46.7
Ciclev10010675m.g Citrus clementina HOM05D006736 ORTHO05D008459 5.2e-10 68.2 77 55.8
Duzib170G0862 Durio zibethinus HOM05D006736 ORTHO05D008459 5.2e-10 68.2 93 49.5
ECA234G2793 Erigeron canadensis HOM05D006736 ORTHO05D008459 6.8e-10 67.8 75 48.0
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 6.8e-10 67.8 93 46.2
FAN21G1732 Fragaria x ananassa HOM05D006736 ORTHO05D008459 8.9e-10 67.4 88 48.9
Sed0014616 Sechium edule HOM05D006736 ORTHO05D008459 8.9e-10 67.4 75 46.7
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 1.2e-09 67.0 87 49.4
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 1.2e-09 67.0 86 51.2
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 1.2e-09 67.0 93 46.2
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 1.5e-09 66.6 72 52.8
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 1.5e-09 66.6 92 41.3
MD03G1035000 Malus domestica HOM05D006736 ORTHO05D008459 2.6e-09 65.9 61 59.0
Potri.001G371400 Populus trichocarpa HOM05D006736 ORTHO05D008459 2.6e-09 65.9 95 38.9
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 3.4e-09 65.5 84 44.0
CSS0024852 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 3.4e-09 65.5 107 45.8
Peaxi162Scf01164g00020 Petunia axillaris HOM05D006736 ORTHO05D008459 5.8e-09 64.7 82 51.2
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 5.8e-09 64.7 74 50.0
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 7.5e-09 64.3 90 43.3
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 7.5e-09 64.3 78 50.0
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 9.9e-09 63.9 51 62.7
RcHm_v2.0_Chr5g0075611 Rosa chinensis HOM05D006736 ORTHO05D008459 1.3e-08 63.5 74 47.3
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 1.7e-08 63.2 86 44.2
Gohir.D01G078200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 3.7e-08 62.0 74 47.3
Gorai.002G102800 Gossypium raimondii HOM05D006736 ORTHO05D008459 3.7e-08 62.0 74 47.3
PGR083G0815 Punica granatum HOM05D006736 ORTHO05D008459 4.9e-08 61.6 86 46.5
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 4.9e-08 61.6 72 54.2
ATR0751G116 Amborella trichopoda HOM05D006736 ORTHO05D008459 6.4e-08 61.2 93 47.3
Ah.06g181490 Amaranthus hybridus HOM05D006736 ORTHO05D008459 8.3e-08 60.8 59 59.3
CARHR269350 Cardamine hirsuta HOM05D006736 ORTHO05D008459 8.3e-08 60.8 80 47.5
Phvul.008G281200 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 8.3e-08 60.8 84 41.7
Gohir.A01G093700 Gossypium hirsutum HOM05D006736 ORTHO05D008459 1.1e-07 60.5 74 45.9
Sed0023265 Sechium edule HOM05D006736 ORTHO05D008459 1.4e-07 60.1 83 41.0
Atru.chr2.3834 Acer truncatum HOM05D006736 ORTHO05D008459 1.9e-07 59.7 75 50.7
Manes.01G003400 Manihot esculenta HOM05D006736 ORTHO05D008459 1.9e-07 59.7 83 47.0
arahy.Tifrunner.gnm1.ann1.FR49Y0 Arachis hypogaea HOM05D006736 ORTHO05D008459 3.2e-07 58.9 48 64.6
arahy.Tifrunner.gnm1.ann1.P4RFEM Arachis hypogaea HOM05D006736 ORTHO05D008459 3.2e-07 58.9 48 64.6
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 3.2e-07 58.9 87 43.7
Manes.05G200400 Manihot esculenta HOM05D006736 ORTHO05D008459 3.2e-07 58.9 73 47.9
Thhalv10015819m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 4.1e-07 58.5 40 70.0
Oeu019702.1 Olea europaea HOM05D006736 ORTHO05D008459 4.1e-07 58.5 80 46.2
BcaC04g20175 Brassica carinata HOM05D006736 ORTHO05D008459 7.1e-07 57.8 40 70.0
C09p46970 Brassica napus HOM05D006736 ORTHO05D008459 7.1e-07 57.8 40 70.0
BolC9t57545H Brassica oleracea HOM05D006736 ORTHO05D008459 7.1e-07 57.8 40 70.0
Lsat_1_v5_gn_5_122340 Lactuca sativa HOM05D006736 ORTHO05D008459 7.1e-07 57.8 52 59.6
Sp6g17830 Schrenkiella parvula HOM05D006736 ORTHO05D008459 9.2e-07 57.4 40 70.0
AT5G55980 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 1.6e-06 56.6 54 57.4
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 2.1e-06 56.2 29 82.8
BcaB01g04378 Brassica carinata HOM05D006736 ORTHO05D008459 2.1e-06 56.2 40 67.5
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 2.7e-06 55.8 57 54.4
A10p13210 Brassica napus HOM05D006736 ORTHO05D008459 2.7e-06 55.8 36 75.0
BraA10t43419Z Brassica rapa HOM05D006736 ORTHO05D008459 2.7e-06 55.8 36 75.0
Sabra11G0088600 Salix brachista HOM05D006736 ORTHO05D008459 2.7e-06 55.8 91 45.1
BcaB08g35964 Brassica carinata HOM05D006736 ORTHO05D008459 3.5e-06 55.5 40 70.0
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 3.5e-06 55.5 66 48.5
AL8G31560 Arabidopsis lyrata HOM05D006736 ORTHO05D008459 6.0e-06 54.7 54 57.4
Gohir.A13G130900 Gossypium hirsutum HOM05D006736 ORTHO05D008459 6.0e-06 54.7 81 39.5
AT3G13227 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 7.8e-06 54.3 104 40.4
Carub.0008s1632 Capsella rubella HOM05D006736 ORTHO05D008459 7.8e-06 54.3 41 63.4
Thhalv10021795m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 7.8e-06 54.3 102 40.2


User provided reference genes

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