Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.5e-151 538.1 316 100.0
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.1e-120 435.3 246 100.0
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.3e-45 186.0 250 48.0
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 1.2e-39 167.9 250 43.6
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-39 167.2 249 45.0
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-39 167.2 249 45.0
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.8e-38 164.1 250 45.6
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.1e-38 162.5 251 41.8
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.2e-36 157.1 252 43.3
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 3.7e-36 156.4 250 40.8
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.4e-35 154.5 252 42.5
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 1.4e-35 154.5 252 40.1
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 1.8e-35 154.1 251 43.0
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 4.1e-35 152.9 256 39.1
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 5.3e-35 152.5 253 41.5
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.2e-34 151.4 251 42.2
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 2.0e-34 150.6 249 41.4
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.5e-34 149.4 260 38.8
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 7.7e-34 148.7 249 39.8
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 1.7e-33 147.5 249 39.8
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 3.8e-33 146.4 251 39.4
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.5e-32 143.7 251 39.0
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 3.2e-32 143.3 248 41.9
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.2e-32 143.3 128 56.2
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 9.4e-32 141.7 248 39.5
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 9.4e-32 141.7 251 39.0
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 9.4e-32 141.7 126 58.7
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.2e-31 141.4 247 40.1
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 1.2e-31 141.4 260 38.8
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 2.7e-31 140.2 256 41.0
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 4.7e-31 139.4 126 56.3
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 4.7e-31 139.4 128 54.7
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 6.1e-31 139.0 185 50.3
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 8.0e-31 138.7 257 38.9
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 8.0e-31 138.7 249 39.8
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 2.3e-30 137.1 256 37.1
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 3.0e-30 136.7 251 38.2
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 3.0e-30 136.7 251 38.6
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 6.7e-30 135.6 247 38.1
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 4.4e-29 132.9 124 56.5
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 5.7e-29 132.5 248 38.3
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 9.7e-29 131.7 106 63.2
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 9.7e-29 131.7 250 38.4
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 9.7e-29 131.7 151 49.7
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 1.7e-28 131.0 250 38.8
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 4.8e-28 129.4 249 36.9
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 8.2e-28 128.6 106 59.4
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 1.4e-27 127.9 147 47.6
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 1.8e-27 127.5 108 60.2
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 2.4e-27 127.1 246 41.1
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 2.4e-27 127.1 125 52.0
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 3.1e-27 126.7 145 48.3
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 2.6e-26 123.6 148 46.6
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 2.6e-26 123.6 116 57.8
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 5.9e-26 122.5 145 44.1
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 5.9e-26 122.5 145 44.1
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 5.9e-26 122.5 248 36.7
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 7.7e-26 122.1 252 36.9
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 7.7e-26 122.1 126 52.4
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 7.7e-26 122.1 249 36.5
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 1.3e-25 121.3 263 35.4
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.3e-25 121.3 249 36.9
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 2.9e-25 120.2 144 49.3
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 2.9e-25 120.2 126 54.8
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 8.5e-25 118.6 124 53.2
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 1.9e-24 117.5 252 35.7
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 2.5e-24 117.1 162 45.1
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 2.5e-24 117.1 106 54.7
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.2e-24 116.7 116 54.3
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 3.2e-24 116.7 119 48.7
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 4.2e-24 116.3 122 51.6
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 5.5e-24 115.9 252 39.3
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 6.1e-23 112.5 129 47.3
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 6.1e-23 112.5 265 34.7
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 8.0e-23 112.1 87 60.9
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 8.0e-23 112.1 99 59.6
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 1.4e-22 111.3 238 39.1
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 1.4e-22 111.3 142 47.2
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 2.3e-22 110.5 251 35.5
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.3e-22 110.5 92 62.0
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 2.3e-22 110.5 123 48.0
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 3.0e-22 110.2 150 46.7
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 4.0e-22 109.8 91 61.5
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 5.2e-22 109.4 92 59.8
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.2e-22 109.4 92 62.0
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 6.8e-22 109.0 251 35.5
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 8.8e-22 108.6 96 61.5
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 1.5e-21 107.8 160 42.5
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.0e-21 107.5 87 63.2
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 2.6e-21 107.1 252 34.9
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 2.6e-21 107.1 99 57.6
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.4e-21 106.7 92 60.9
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 5.7e-21 105.9 81 67.9
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 7.5e-21 105.5 87 63.2
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 7.5e-21 105.5 252 33.3
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.3e-20 104.8 94 63.8
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.2e-20 104.0 94 62.8
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.2e-20 104.0 94 62.8
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 2.8e-20 103.6 256 35.9
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 8.3e-20 102.1 130 49.2
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 8.3e-20 102.1 90 58.9
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 1.4e-19 101.3 86 61.6
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.4e-19 101.3 149 41.6
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 1.4e-19 101.3 81 67.9
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 1.8e-19 100.9 99 53.5
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 4.1e-19 99.8 86 61.6
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 7.0e-19 99.0 94 60.6
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 9.1e-19 98.6 98 54.1
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 3.5e-18 96.7 126 43.7
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 5.9e-18 95.9 118 50.8
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 5.9e-18 95.9 90 56.7
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 7.7e-18 95.5 153 39.9
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.0e-17 95.1 252 42.1
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.7e-17 94.4 150 39.3
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.8e-17 93.2 89 55.1
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 1.5e-16 91.3 84 57.1
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.5e-16 91.3 96 51.0
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.5e-16 91.3 96 51.0
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.5e-16 91.3 96 51.0
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.5e-16 91.3 96 51.0
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 1.9e-16 90.9 86 58.1
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 2.5e-16 90.5 84 56.0
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.2e-16 89.7 126 39.7
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 7.2e-16 89.0 93 52.7
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 9.4e-16 88.6 126 38.9
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.6e-15 87.8 247 31.2
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 2.1e-15 87.4 261 33.3
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.4e-14 84.7 89 51.7
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 1.4e-14 84.7 89 51.7
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.3e-14 84.0 89 51.7
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.3e-14 84.0 89 51.7
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 3.0e-14 83.6 88 51.1
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 5.2e-14 82.8 251 32.7
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 8.8e-14 82.0 89 52.8
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 2.6e-13 80.5 262 35.1
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 4.4e-13 79.7 89 50.6
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 4.4e-13 79.7 250 34.4
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 5.7e-13 79.3 89 50.6
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 5.7e-13 79.3 89 50.6
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 7.5e-13 79.0 70 57.1
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 1.7e-12 77.8 89 50.6
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 1.7e-12 77.8 89 50.6
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 1.7e-12 77.8 89 50.6
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 2.2e-12 77.4 114 44.7
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 3.7e-12 76.6 118 42.4
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 3.7e-12 76.6 118 42.4
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 3.7e-12 76.6 48 70.8
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 6.3e-12 75.9 89 46.1
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 8.3e-12 75.5 247 29.6
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 1.4e-11 74.7 83 47.0
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 1.8e-11 74.3 147 39.5
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.8e-11 74.3 89 48.3
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 1.8e-11 74.3 147 39.5
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 4.1e-11 73.2 60 58.3
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.1e-11 72.0 250 30.8
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 5.9e-10 69.3 87 49.4
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 5.9e-10 69.3 87 40.2
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.1e-08 65.1 82 43.9
Aqoxy5G03598 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.9e-08 64.3 68 47.1
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 4.2e-08 63.2 89 43.8
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.2e-07 61.6 87 43.7
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 2.1e-07 60.8 216 35.6
Pp3c27_1870 Physcomitrium patens HOM05D018410 ORTHO05D021325 2.3e-06 57.4 59 49.2
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.0e-06 56.6 84 40.5


User provided reference genes

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