Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01727 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.0e-158 562.4 290 100.0
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.9e-127 459.5 329 76.6
Aqoxy1G01757 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 3.2e-18 96.7 283 29.3
Thecc.01G047300 Theobroma cacao HOM05D000823 ORTHO05D000088 1.4e-13 81.3 109 36.7
Nn5g28071 Nelumbo nucifera HOM05D000823 ORTHO05D000088 4.0e-13 79.7 122 38.5
Aqoxy6G00929 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 9.0e-13 78.6 75 52.0
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.5e-12 77.8 94 39.4
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 9.9e-12 75.1 124 32.3
Atru.chr13.592 Acer truncatum HOM05D000823 ORTHO05D000088 1.1e-10 71.6 103 38.8
PSO541G5436 Papaver somniferum HOM05D000823 ORTHO05D000088 2.4e-10 70.5 92 38.0
Manes.13G130800 Manihot esculenta HOM05D000823 ORTHO05D000088 4.2e-10 69.7 109 34.9
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 4.2e-10 69.7 101 33.7
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 5.4e-10 69.3 114 34.2
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 9.3e-10 68.6 95 36.8
Nn5g29401 Nelumbo nucifera HOM05D000823 ORTHO05D000088 9.3e-10 68.6 98 36.7
MD11G1250800 Malus domestica HOM05D000823 ORTHO05D000088 6.0e-09 65.9 85 42.4
Nn6g32139 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.0e-09 65.9 94 41.5
Gohir.A02G160733 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.0e-08 65.1 103 33.0
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.0e-08 65.1 103 33.0
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 1.0e-08 65.1 103 33.0
QL02p006491 Quercus lobata HOM05D000823 ORTHO05D000088 1.0e-08 65.1 96 36.5
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.3e-08 64.7 78 35.9
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.3e-08 64.7 78 35.9
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 5.1e-08 62.8 81 37.0
Prupe.4G178200 Prunus persica HOM05D000823 ORTHO05D000088 8.7e-08 62.0 92 38.0
Prupe.4G178100 Prunus persica HOM05D000823 ORTHO05D000088 1.1e-07 61.6 82 37.8
Prupe.4G206900 Prunus persica HOM05D000823 ORTHO05D000088 1.1e-07 61.6 91 38.5
Carub.0007s0895 Capsella rubella HOM05D000888 ORTHO05D000740 1.5e-07 61.2 85 36.5
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 1.5e-07 61.2 98 33.7
Ciclev10026137m.g Citrus clementina HOM05D000823 ORTHO05D000088 1.9e-07 60.8 135 27.4
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 1.9e-07 60.8 84 32.1
Oeu003705.1 Olea europaea HOM05D000395 ORTHO05D000088 1.9e-07 60.8 103 34.0
Thecc.01G046900 Theobroma cacao HOM05D000395 ORTHO05D000088 1.9e-07 60.8 162 28.4
PSO421G0689 Papaver somniferum HOM05D000823 ORTHO05D000088 2.5e-07 60.5 100 38.0
VMungo0720G2046 Vigna mungo HOM05D000395 ORTHO05D000088 2.5e-07 60.5 123 30.9
Prupe.1G388000 Prunus persica HOM05D000823 ORTHO05D000088 3.3e-07 60.1 98 33.7
RcHm_v2.0_Chr5g0033041 Rosa chinensis HOM05D000823 ORTHO05D000088 3.3e-07 60.1 123 31.7
CAN.G32.2 Capsicum annuum HOM05D000888 ORTHO05D000740 4.3e-07 59.7 79 32.9
FvH4_3g19710 Fragaria vesca HOM05D000823 ORTHO05D000088 4.3e-07 59.7 83 34.9
FAN11G2176 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.3e-07 59.7 83 34.9
Gohir.A08G223600 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.3e-07 59.7 151 26.5
Gorai.003G020800 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.3e-07 59.7 77 37.7
Gorai.004G260200 Gossypium raimondii HOM05D000395 ORTHO05D000088 5.6e-07 59.3 251 23.1
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 5.6e-07 59.3 99 34.3
CDE01G0565 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 7.4e-07 58.9 68 38.2
DCAR_003839 Daucus carota HOM05D000823 ORTHO05D000088 9.6e-07 58.5 113 31.9
EL10Ac8g19103 Beta vulgaris HOM05D017700 ORTHO05D000088 1.3e-06 58.2 117 28.2
Gohir.1Z049472 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.3e-06 58.2 251 23.1
Gohir.D03G019700 Gossypium hirsutum HOM05D000823 ORTHO05D010235 1.3e-06 58.2 91 28.6
Gorai.003G020400 Gossypium raimondii HOM05D000823 ORTHO05D010235 1.3e-06 58.2 91 28.6
Prupe.7G064600 Prunus persica HOM05D000823 ORTHO05D000088 1.3e-06 58.2 87 33.3
CsaV3_6G042810 Cucumis sativus L. HOM05D000823 ORTHO05D000088 1.6e-06 57.8 156 30.1
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 1.6e-06 57.8 93 35.5
FAN06G1958 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.6e-06 57.8 93 35.5
MD11G1251100 Malus domestica HOM05D000823 ORTHO05D000088 1.6e-06 57.8 104 34.6
PGR083G1938 Punica granatum HOM05D000823 ORTHO05D000088 1.6e-06 57.8 72 40.3
unitig_0.g13 Utricularia gibba HOM05D000888 ORTHO05D000740 1.6e-06 57.8 102 33.3
Gohir.D12G068000 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.1e-06 57.4 124 27.4
ATR0665G295 Amborella trichopoda HOM05D000823 ORTHO05D000088 2.8e-06 57.0 113 32.7
MELO3C007521.2 Cucumis melo HOM05D000823 ORTHO05D000088 2.8e-06 57.0 152 28.9
Sed0023289 Sechium edule HOM05D000823 ORTHO05D000088 2.8e-06 57.0 124 30.6
Solyc04g064830.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.8e-06 57.0 79 32.9
Sopen04g026790 Solanum pennellii HOM05D000888 ORTHO05D000740 2.8e-06 57.0 79 32.9
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 2.8e-06 57.0 123 26.8
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 3.7e-06 56.6 83 32.5
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.7e-06 56.6 92 33.7
AUR62025199 Chenopodium quinoa HOM05D017700 ORTHO05D000088 4.8e-06 56.2 106 32.1
Gohir.A02G160700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 4.8e-06 56.2 127 28.3
PGSC0003DMG403024846 Solanum tuberosum HOM05D000888 ORTHO05D000740 4.8e-06 56.2 79 31.6
Gohir.A02G160800 Gossypium hirsutum HOM05D000823 ORTHO05D010235 6.2e-06 55.8 91 27.5
Gohir.D03G019775 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.2e-06 55.8 78 37.2
CiPaw.01G027400 Carya illinoinensis HOM05D000823 ORTHO05D000088 8.1e-06 55.5 95 29.5
Migut.D01639 Erythranthe guttata HOM05D000888 ORTHO05D000740 8.1e-06 55.5 82 35.4
Manes.13G131000 Manihot esculenta HOM05D000823 ORTHO05D000088 8.1e-06 55.5 79 31.6
Prupe.4G178300 Prunus persica HOM05D000823 ORTHO05D000088 8.1e-06 55.5 94 34.0
QL06p043901 Quercus lobata HOM05D000395 ORTHO05D000088 8.1e-06 55.5 103 29.1
TWI73G1024 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 8.1e-06 55.5 236 23.7


User provided reference genes

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