Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01641 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 3.1e-59 231.5 107 100.0
Aqoxy90s003 Aquilegia oxysepala HOM05D003212 ORTHO05D077977 9.9e-34 146.7 69 97.1
Aqoxy5G02061 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 1.2e-26 123.2 71 83.1
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 4.2e-16 88.2 52 82.7
ECA248G3712 Erigeron canadensis HOM05D003212 ORTHO05D003959 1.6e-15 86.3 52 80.8
Manes.11G004200 Manihot esculenta HOM05D003212 ORTHO05D003959 3.5e-15 85.1 52 80.8
DCAR_006596 Daucus carota HOM05D003212 ORTHO05D003959 6.0e-15 84.3 52 78.8
AUR62003806 Chenopodium quinoa HOM05D003212 ORTHO05D003959 7.9e-15 84.0 52 78.8
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 1.0e-14 83.6 52 78.8
Ca_10473_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.3e-14 83.2 52 78.8
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.3e-14 83.2 52 80.8
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.3e-14 83.2 52 80.8
Sabra01G0019400 Salix brachista HOM05D003212 ORTHO05D003959 1.3e-14 83.2 52 80.8
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
ATR0789G118 Amborella trichopoda HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 76.9
Cpa.g.sc223.10 Carica papaya HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
ClCG01G007740 Citrullus lanatus HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
MELO3C005122.2 Cucumis melo HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
CsaV3_5G024820 Cucumis sativus L. HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
Rhsim01G0123800 Rhododendron simsii HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 1.8e-14 82.8 52 78.8
Lj3g0002083 Lotus japonicus HOM05D003212 ORTHO05D003959 2.3e-14 82.4 55 74.5
QL04p014894 Quercus lobata HOM05D003212 ORTHO05D003959 2.3e-14 82.4 52 76.9
CiPaw.14G006800 Carya illinoinensis HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 75.0
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
FvH4_7g02810 Fragaria vesca HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
FAN01G2682 Fragaria x ananassa HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
FAN03G0414 Fragaria x ananassa HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
FAN06G3951 Fragaria x ananassa HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
Lalb_Chr03g0032831 Lupinus albus HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
RcHm_v2.0_Chr1g0323241 Rosa chinensis HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 78.8
Zm00001eb140930 Zea mays HOM05D003212 ORTHO05D003959 3.0e-14 82.0 52 75.0
FAN10G3499 Fragaria x ananassa HOM05D003212 ORTHO05D003959 3.9e-14 81.6 52 76.9
Lj3g0024329 Lotus japonicus HOM05D003212 ORTHO05D003959 3.9e-14 81.6 52 78.8
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 5.1e-14 81.3 52 76.9
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 5.1e-14 81.3 52 75.0
Sed0013182 Sechium edule HOM05D003212 ORTHO05D003959 6.7e-14 80.9 52 75.0
TPR.G36892 Trifolium pratense HOM05D003212 ORTHO05D003959 6.7e-14 80.9 52 76.9
Zm00001eb140940 Zea mays HOM05D003212 ORTHO05D003959 6.7e-14 80.9 52 76.9
CANSAT80G2392 Cannabis sativa HOM05D003212 ORTHO05D003959 8.7e-14 80.5 52 76.9
AUR62001997 Chenopodium quinoa HOM05D003212 ORTHO05D003959 8.7e-14 80.5 52 75.0
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 8.7e-14 80.5 52 76.9
Prupe.2G032600 Prunus persica HOM05D003212 ORTHO05D003959 8.7e-14 80.5 52 76.9
VMungo1127G0513 Vigna mungo HOM05D003212 ORTHO05D003959 8.7e-14 80.5 52 76.9
Glyma.13G198700 Glycine max HOM05D003212 ORTHO05D003959 1.1e-13 80.1 52 76.9
MD09G1262400 Malus domestica HOM05D003212 ORTHO05D003959 1.1e-13 80.1 52 78.8
Phvul.005G029300 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 1.1e-13 80.1 52 76.9
Sed0011268 Sechium edule HOM05D003212 ORTHO05D003959 1.1e-13 80.1 52 73.1
MSTRG.20521 Avicennia marina HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 75.0
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 76.9
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 76.9
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 76.9
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 76.9
vmacro12692 Vaccinium macrocarpon HOM05D003212 ORTHO05D003959 1.5e-13 79.7 52 76.9
Cc02_g26670 Coffea canephora HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 75.0
Lalb_Chr04g0264051 Lupinus albus HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Lalb_Chr14g0366121 Lupinus albus HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Medtr1g025060 Medicago truncatula HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Medtr3g017580 Medicago truncatula HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Medtr8g038390 Medicago truncatula HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 75.0
Psat5g219440 Pisum sativum HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Hund13345 Selenicereus undatus HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 71.2
Sopen11g027550 Solanum pennellii HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 75.0
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 75.0
TPR.G17794 Trifolium pratense HOM05D003212 ORTHO05D003959 1.9e-13 79.3 52 76.9
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
Gohir.D13G149300 Gossypium hirsutum HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
Phvul.011G207800 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 75.0
Potri.001G026300 Populus trichocarpa HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 76.9
Solyc11g068830.2 Solanum lycopersicum HOM05D003212 ORTHO05D003959 2.5e-13 79.0 52 73.1
Ciclev10001014m.g Citrus clementina HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 75.0
Ciclev10004916m.g Citrus clementina HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 75.0
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 75.0
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 75.0
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 76.9
Psat0s1718g0040 Pisum sativum HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 75.0
VMungo1080G0024 Vigna mungo HOM05D003212 ORTHO05D003959 3.3e-13 78.6 52 76.9
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 4.3e-13 78.2 52 75.0
Hund15723 Selenicereus undatus HOM05D003212 ORTHO05D003959 4.3e-13 78.2 52 73.1
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 71.2
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 71.2
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
TAR369G1042 Trochodendron aralioides HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
HPP92_003235 Vanilla planifolia HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
GSVIVG01000650001 Vitis vinifera HOM05D003212 ORTHO05D003959 5.6e-13 77.8 52 75.0
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 73.1
Nn7g36634 Nelumbo nucifera HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 73.1
Oeu002655.1 Olea europaea HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 73.1
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 75.0
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 75.0
VMungo1215G0810 Vigna mungo HOM05D003212 ORTHO05D003959 7.4e-13 77.4 52 75.0
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 9.6e-13 77.0 52 71.2
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 9.6e-13 77.0 52 73.1
Os01g0951400 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 9.6e-13 77.0 52 73.1
PGR031G0586 Punica granatum HOM05D003212 ORTHO05D003959 9.6e-13 77.0 52 73.1
SGA_v2.0_scaffold232G43508 Striga asiatica HOM05D003212 ORTHO05D003959 9.6e-13 77.0 52 71.2
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 1.3e-12 76.6 52 71.2
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 1.3e-12 76.6 51 74.5
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 1.3e-12 76.6 52 73.1
Lj7A581T52 Lonicera japonica HOM05D003212 ORTHO05D003959 1.3e-12 76.6 52 71.2
unitig_26.g9606 Utricularia gibba HOM05D003212 ORTHO05D003959 1.3e-12 76.6 52 75.0
GSVIVG01000654001 Vitis vinifera HOM05D003212 ORTHO05D003959 1.3e-12 76.6 52 73.1
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 1.6e-12 76.3 51 68.6
Ca_18881_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.6e-12 76.3 52 75.0
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 1.6e-12 76.3 52 75.0
PSO384G1532 Papaver somniferum HOM05D003212 ORTHO05D003959 1.6e-12 76.3 52 69.2
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 73.1
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 73.1
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
Eucgr.G03242 Eucalyptus grandis HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 73.1
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
Glyma.11G154200 Glycine max HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 73.1
PSO339G4798 Papaver somniferum HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 67.3
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 2.1e-12 75.9 52 69.2
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 67.3
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 67.3
Migut.N01834 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 69.2
Migut.O00503 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 69.2
MD17G1257300 Malus domestica HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 75.0
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 2.8e-12 75.5 52 73.1
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 4.8e-12 74.7 52 69.2
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 4.8e-12 74.7 52 73.1
HPP92_003231 Vanilla planifolia HOM05D003212 ORTHO05D003959 4.8e-12 74.7 52 73.1
Migut.B01220 Erythranthe guttata HOM05D003212 ORTHO05D003959 6.2e-12 74.3 51 72.5
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 6.2e-12 74.3 52 73.1
SEGI_29745 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 6.2e-12 74.3 55 67.3
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 6.2e-12 74.3 52 71.2
Mapoly0052s0107 Marchantia polymorpha HOM05D003212 ORTHO05D003959 1.4e-11 73.2 52 65.4
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 1.8e-11 72.8 52 67.3
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 1.8e-11 72.8 52 67.3
Pp3c13_16830 Physcomitrium patens HOM05D003212 ORTHO05D003959 1.8e-11 72.8 52 65.4
Nitab4.5_0000893g0050 Nicotiana tabacum HOM05D003212 ORTHO05D003959 2.4e-11 72.4 51 72.5
Ca_02713_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 3.1e-11 72.0 52 71.2
Ca_23514_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 4.0e-11 71.6 52 69.2
Nitab4.5_0001135g0170 Nicotiana tabacum HOM05D003212 ORTHO05D003959 5.3e-11 71.2 51 70.6
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 9.0e-11 70.5 46 73.9
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis HOM05D003212 ORTHO05D003959 2.6e-10 68.9 52 63.5
Pp3c3_16990 Physcomitrium patens HOM05D003212 ORTHO05D003959 4.5e-10 68.2 52 61.5
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 5.8e-10 67.8 52 59.6
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 7.6e-10 67.4 82 51.2
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 1.3e-09 66.6 51 58.8
Aqoxy61s001 Aquilegia oxysepala HOM05D000918 ORTHO05D000109 8.4e-09 63.9 43 72.1
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 4.6e-07 58.2 51 52.9
ECA232G0145 Erigeron canadensis HOM05D003212 ORTHO05D003959 2.3e-06 55.8 58 60.3
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 2.3e-06 55.8 51 51.0


User provided reference genes

Program Settings