Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01630 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 3.6e-61 238.0 117 100.0
Aqoxy6G02279 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.8e-36 156.0 108 76.9
Aqoxy4G01383 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 2.0e-24 115.9 104 50.0
Aqoxy4G03175 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 2.0e-24 115.9 104 50.0
Aqoxy5G04189 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 2.0e-24 115.9 104 50.0
Medtr3g032330 Medicago truncatula HOM05D002907 ORTHO05D000065 7.5e-11 70.9 86 38.4
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-10 70.1 102 36.3
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 3.7e-10 68.6 102 35.3
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-10 68.2 102 34.3
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-10 68.2 102 34.3
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-10 68.2 102 34.3
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 4.9e-10 68.2 109 30.3
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 6.4e-10 67.8 102 34.3
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 33.3
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 33.3
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 34.3
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 1.4e-09 66.6 95 35.8
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 33.3
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 33.3
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-09 66.6 102 33.3
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-09 65.9 99 33.3
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 2.4e-09 65.9 96 38.5
CANSAT64G0304 Cannabis sativa HOM05D002907 ORTHO05D000065 4.1e-09 65.1 102 31.4
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 4.1e-09 65.1 102 34.3
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 5.4e-09 64.7 108 31.5
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 7.1e-09 64.3 96 34.4
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 7.1e-09 64.3 96 34.4
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 7.1e-09 64.3 102 31.4
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 9.2e-09 63.9 102 33.3
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 9.2e-09 63.9 111 29.7
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.2e-08 63.5 97 33.0
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-08 63.5 102 33.3
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 1.6e-08 63.2 95 31.6
Medtr2g032570 Medicago truncatula HOM05D007848 ORTHO05D000174 2.1e-08 62.8 102 32.4
Medtr5g055160 Medicago truncatula HOM05D007848 ORTHO05D000174 2.7e-08 62.4 102 32.4
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 2.7e-08 62.4 99 32.3
C09p48830 Brassica napus HOM05D011161 ORTHO05D026813 3.5e-08 62.0 92 29.3
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-08 62.0 108 28.7
HanXRQChr15g0463841 Helianthus annuus HOM05D000353 ORTHO05D000174 3.5e-08 62.0 97 33.0
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 3.5e-08 62.0 100 33.0
BraA09t40037Z Brassica rapa HOM05D000313 ORTHO05D000065 4.6e-08 61.6 99 34.3
Aqoxy1G03705 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 6.0e-08 61.2 86 38.4
Medtr5g060920 Medicago truncatula HOM05D007848 ORTHO05D000174 6.0e-08 61.2 79 38.0
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.0e-08 61.2 99 30.3
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-08 60.8 98 29.6
Medtr3g032190 Medicago truncatula HOM05D007848 ORTHO05D000174 7.8e-08 60.8 79 38.0
Medtr4g028320 Medicago truncatula HOM05D007848 ORTHO05D000174 7.8e-08 60.8 83 37.3
Thhalv10016010m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.0e-07 60.5 103 30.1
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.0e-07 60.5 96 32.3
Medtr1g091180 Medicago truncatula HOM05D007848 ORTHO05D000174 1.0e-07 60.5 82 36.6
BcaB07g32743 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-07 59.7 92 28.3
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-07 59.7 98 29.6
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 59.7 98 29.6
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 59.7 98 29.6
TPR.G13958 Trifolium pratense HOM05D036439 ORTHO05D010576 1.7e-07 59.7 85 35.3
BcaC01g00622 Brassica carinata HOM05D000305 ORTHO05D000065 2.3e-07 59.3 100 31.0
BcaC05g28034 Brassica carinata HOM05D000305 ORTHO05D000065 2.3e-07 59.3 100 31.0
ECA236G5002 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.3e-07 59.3 100 30.0
Thhalv10003346m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 2.3e-07 59.3 103 30.1
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 2.3e-07 59.3 105 27.6
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.3e-07 59.3 100 29.0
Peaxi162Scf00715g00062 Petunia axillaris HOM05D002907 ORTHO05D000065 2.3e-07 59.3 100 29.0
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 2.3e-07 59.3 89 34.8
Aqoxy7G02103 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 3.0e-07 58.9 86 37.2
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 3.0e-07 58.9 103 29.1
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 3.0e-07 58.9 96 32.3
TPR.G28204 Trifolium pratense HOM05D002907 ORTHO05D000065 3.0e-07 58.9 72 43.1
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-07 58.5 95 32.6
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 3.9e-07 58.5 84 33.3
A09p27800 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-07 58.2 99 32.3
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-07 58.2 95 32.6
BraA09t38350Z Brassica rapa HOM05D000353 ORTHO05D000174 5.1e-07 58.2 99 32.3
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 5.1e-07 58.2 103 28.2
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 5.1e-07 58.2 97 27.8
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 6.6e-07 57.8 92 38.0
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 92 38.0
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 6.6e-07 57.8 95 32.6
C02p33390 Brassica napus HOM05D000353 ORTHO05D015401 6.6e-07 57.8 91 27.5
BolC7t41563H Brassica oleracea HOM05D009574 ORTHO05D000174 6.6e-07 57.8 93 31.2
Lsat_1_v5_gn_1_86780 Lactuca sativa HOM05D009063 ORTHO05D000174 6.6e-07 57.8 86 32.6
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.6e-07 57.4 92 38.0
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 8.6e-07 57.4 99 31.3
C07p10990 Brassica napus HOM05D000353 ORTHO05D000174 8.6e-07 57.4 93 31.2
HanXRQChr03g0063681 Helianthus annuus HOM05D000353 ORTHO05D000174 8.6e-07 57.4 96 31.2
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.6e-07 57.4 99 31.3
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-06 57.0 86 34.9
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-06 57.0 86 30.2
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 1.1e-06 57.0 91 34.1
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 1.1e-06 57.0 91 34.1
C08p36900 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-06 56.6 93 26.9
BolC8t48662H Brassica oleracea HOM05D000305 ORTHO05D000065 1.5e-06 56.6 96 30.2
BraA05t20758Z Brassica rapa HOM05D000305 ORTHO05D000065 1.5e-06 56.6 96 30.2
Psat4g107960 Pisum sativum HOM05D016976 ORTHO05D000174 1.5e-06 56.6 80 28.8
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.5e-06 56.6 85 31.8
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.9e-06 56.2 87 34.5
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 1.9e-06 56.2 82 31.7
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 1.9e-06 56.2 93 32.3
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 1.9e-06 56.2 93 32.3
MD12G1081100 Malus domestica HOM05D007856 ORTHO05D003348 1.9e-06 56.2 86 32.6
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-06 56.2 91 34.1
Ah.06g192340 Amaranthus hybridus HOM05D003062 ORTHO05D003468 2.5e-06 55.8 95 31.6
AL1G39460 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 2.5e-06 55.8 101 30.7
arahy.Tifrunner.gnm1.ann1.TD74G4 Arachis hypogaea HOM05D002441 ORTHO05D008317 2.5e-06 55.8 95 31.6
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 2.5e-06 55.8 100 31.0
Medtr5g032920 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-06 55.8 81 30.9
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 2.5e-06 55.8 93 33.3
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 3.3e-06 55.5 105 28.6
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.3e-06 55.5 92 37.0
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-06 55.5 99 31.3
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-06 55.5 87 40.2
Thhalv10000462m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.3e-06 55.5 104 27.9
Thhalv10009766m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.3e-06 55.5 104 27.9
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 3.3e-06 55.5 103 27.2
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 3.3e-06 55.5 103 27.2
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 3.3e-06 55.5 86 34.9
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 3.3e-06 55.5 95 31.6
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.3e-06 55.5 95 30.5
AL7G20110 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.3e-06 55.1 82 31.7
AT1G14800 Arabidopsis thaliana HOM05D000313 ORTHO05D000065 4.3e-06 55.1 101 29.7
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 4.3e-06 55.1 71 36.6
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-06 55.1 91 30.8
C03p52500 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 55.1 87 40.2
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-06 55.1 91 30.8
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 4.3e-06 55.1 87 29.9
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 4.3e-06 55.1 103 26.2
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 4.3e-06 55.1 104 27.9
Medtr6g039230 Medicago truncatula HOM05D007848 ORTHO05D000174 4.3e-06 55.1 75 36.0
BcaB01g05982 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-06 54.7 98 24.5
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-06 54.7 85 28.2
BolC4t25987H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-06 54.7 97 35.1
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-06 54.7 95 31.6
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-06 54.7 93 34.4
ECA248G2434 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.6e-06 54.7 87 34.5
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-06 54.7 104 32.7
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 5.6e-06 54.7 91 33.0
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 5.6e-06 54.7 90 30.0
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.6e-06 54.7 77 33.8
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-06 54.3 95 31.6
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-06 54.3 96 29.2
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 7.3e-06 54.3 90 30.0
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 7.3e-06 54.3 100 28.0
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 7.3e-06 54.3 86 31.4
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-06 53.9 85 29.4
BcaB07g33649 Brassica carinata HOM05D000305 ORTHO05D000065 9.5e-06 53.9 100 29.0
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 9.5e-06 53.9 93 31.2
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 53.9 85 31.8
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 9.5e-06 53.9 63 39.7
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 53.9 85 31.8
BolC9t56976H Brassica oleracea HOM05D000353 ORTHO05D000174 9.5e-06 53.9 86 39.5
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 9.5e-06 53.9 95 29.5
Thhalv10027242m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.5e-06 53.9 104 33.7
Thhalv10029157m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.5e-06 53.9 66 45.5
Lj1g0003435 Lotus japonicus HOM05D007499 ORTHO05D000174 9.5e-06 53.9 91 33.0
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 9.5e-06 53.9 86 31.4
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 9.5e-06 53.9 91 33.0
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 9.5e-06 53.9 100 29.0


User provided reference genes

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