Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01613 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 6.1e-51 203.8 96 100.0
Cpa.g.sc263.14 Carica papaya HOM05D000533 ORTHO05D001069 1.4e-47 192.6 96 94.8
Aqoxy3G01140 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.6e-43 179.1 84 98.8
Lalb_Chr00c24g0407301 Lupinus albus HOM05D000533 ORTHO05D001069 3.6e-43 177.9 85 95.3
CDE02G4047 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 4.7e-43 177.6 84 97.6
CDE02G3581 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 6.1e-43 177.2 83 97.6
TPR.G22491 Trifolium pratense HOM05D000533 ORTHO05D001069 8.0e-43 176.8 84 96.4
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 2.3e-42 175.3 84 96.4
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 5.2e-42 174.1 82 95.1
HanXRQChr08g0236031 Helianthus annuus HOM05D000533 ORTHO05D001069 6.8e-42 173.7 84 96.4
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 6.8e-42 173.7 84 96.4
RhsimMtG0002200 Rhododendron simsii HOM05D000533 ORTHO05D001069 6.8e-42 173.7 84 96.4
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 8.9e-42 173.3 83 96.4
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 8.9e-42 173.3 85 94.1
HanXRQChr10g0297201 Helianthus annuus HOM05D000533 ORTHO05D001069 5.7e-41 170.6 85 94.1
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 5.7e-41 170.6 84 92.9
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 7.5e-41 170.2 89 88.8
Ca_26706_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 7.5e-41 170.2 89 88.8
CsaV3_6G025230 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.7e-40 169.1 84 94.0
CsaV3_6G025300 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.7e-40 169.1 84 94.0
CsaV3_UNG208530 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.7e-40 169.1 84 94.0
Sed0020382 Sechium edule HOM05D000533 ORTHO05D001069 1.7e-40 169.1 84 94.0
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 2.2e-40 168.7 85 92.9
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 4.9e-40 167.5 82 93.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 4.9e-40 167.5 82 93.9
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 1.4e-39 166.0 86 91.9
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 1.8e-39 165.6 80 95.0
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 1.8e-39 165.6 80 95.0
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 2.4e-39 165.2 80 96.2
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 4.1e-39 164.5 86 89.5
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 7.0e-39 163.7 80 93.8
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.2e-38 162.9 82 92.7
Peaxi162Scf00197g00027 Petunia axillaris HOM05D000533 ORTHO05D001069 1.6e-38 162.5 84 89.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 2.7e-38 161.8 80 93.8
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 2.7e-38 161.8 82 91.5
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-37 158.3 80 92.5
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 2.9e-37 158.3 84 88.1
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 2.9e-37 158.3 85 85.9
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 5.0e-37 157.5 82 89.0
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.0e-37 157.5 86 84.9
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 6.6e-37 157.1 82 90.2
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 3.3e-36 154.8 82 90.2
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 3.3e-36 154.8 82 90.2
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 1.2e-35 152.9 86 83.7
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 2.1e-35 152.1 82 87.8
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.7e-35 151.0 82 84.1
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.7e-35 151.0 82 84.1
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 8.0e-35 150.2 82 89.0
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 8.0e-35 150.2 82 89.0
PGSC0003DMG400029134 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.8e-33 144.1 82 82.9
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 1.1e-31 139.8 65 96.9
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-31 139.8 82 80.5
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-31 139.8 72 86.1
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 2.7e-30 135.2 80 78.8
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.6e-30 134.4 83 73.5
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.0e-30 134.0 82 75.6
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 1.3e-29 132.9 69 88.4
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 1.3e-29 132.9 69 88.4
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 1.3e-29 132.9 69 88.4
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 1.3e-29 132.9 69 88.4
BraSC159t45715Z Brassica rapa HOM05D000533 ORTHO05D001069 1.3e-29 132.9 69 88.4
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 3.0e-29 131.7 70 85.7
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 5.6e-28 127.5 81 72.8
Nitab4.5_0000172g0870 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.5e-28 126.7 72 79.2
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 8.0e-27 123.6 83 72.3
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 4.0e-26 121.3 82 68.3
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 7.5e-25 117.1 72 75.0
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-23 112.8 65 76.9
CAN.G566.26 Capsicum annuum HOM05D000533 ORTHO05D001069 1.2e-22 109.8 66 77.3
arahy.Tifrunner.gnm1.ann1.AMUJ6F Arachis hypogaea HOM05D000533 ORTHO05D001069 2.3e-21 105.5 49 95.9
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 5.1e-21 104.4 82 57.3
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 5.6e-20 100.9 82 59.8
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 7.3e-20 100.5 55 83.6
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.6e-19 99.4 82 54.9
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.6e-19 99.4 66 69.7
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.6e-19 99.4 80 60.0
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 8.1e-19 97.1 82 56.1
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 4.0e-18 94.7 83 49.4
HanXRQChr04g0109051 Helianthus annuus HOM05D000533 ORTHO05D001069 9.9e-17 90.1 46 93.5
Solyc12g036600.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.9e-17 90.1 53 79.2
GSVIVG01006222001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.7e-16 88.2 47 83.0
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.9e-15 85.9 68 54.4
Lsat_1_v5_gn_5_16221 Lactuca sativa HOM05D000533 ORTHO05D001069 2.4e-15 85.5 59 72.9
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 7.1e-15 84.0 86 48.8
Ah.10g028340 Amaranthus hybridus HOM05D000533 ORTHO05D001069 2.1e-14 82.4 41 92.7
AUR62043913 Chenopodium quinoa HOM05D000533 ORTHO05D001069 3.5e-14 81.6 50 82.0
BraSC48t46306Z Brassica rapa HOM05D000533 ORTHO05D001069 4.6e-14 81.3 41 92.7
Nitab4.5_0006806g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.5e-12 76.3 45 73.3
Nitab4.5_0001034g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-10 70.1 53 67.9
Sopen01g027210 Solanum pennellii HOM05D000533 ORTHO05D001069 1.1e-10 70.1 34 85.3
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.4e-10 68.9 78 41.0
Nitab4.5_0000120g0060 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.0e-10 68.2 41 82.9
CsaV3_6G024190 Cucumis sativus L. HOM05D000533 ORTHO05D001069 4.4e-09 64.7 31 93.5
FAN26G0937 Fragaria x ananassa HOM05D000533 ORTHO05D001069 9.9e-09 63.5 81 46.9
FAN26G3352 Fragaria x ananassa HOM05D000533 ORTHO05D001069 9.9e-09 63.5 35 82.9
Solyc09g031550.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.9e-08 62.0 43 60.5
CAN.G247.8 Capsicum annuum HOM05D000533 ORTHO05D006664 6.4e-08 60.8 31 87.1
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.4e-08 60.5 30 90.0
Haze_21655 Corylus avellana HOM05D004019 ORTHO05D005136 1.9e-07 59.3 64 53.1
Nitab4.5_0012067g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.9e-07 59.3 30 86.7
Nitab4.5_0001291g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.1e-07 57.4 32 81.2
Ca_29118_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.2e-06 56.6 79 38.0
SHI06682 Sapria himalayana HOM05D000533 ORTHO05D001069 3.5e-06 55.1 71 42.3


User provided reference genes

Program Settings