Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 0.0e+00 1877.4 916 100.0
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 0.0e+00 1420.2 939 78.4
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.6e-302 1042.7 870 64.7
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 5.9e-220 768.5 972 45.9
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 4.2e-189 666.0 938 41.7
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.6e-188 664.1 939 41.5
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 4.3e-186 656.0 956 40.4
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 1.6e-185 654.1 941 40.4
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 9.0e-184 648.3 968 40.1
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 1.7e-182 644.0 925 41.0
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 2.4e-181 640.2 954 40.4
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 5.1e-179 632.5 954 38.6
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 2.5e-178 630.2 910 41.3
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.6e-177 627.5 949 37.8
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.4e-176 624.4 949 40.3
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.5e-175 620.9 949 40.0
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.7e-174 617.5 950 40.1
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 2.2e-174 617.1 950 40.0
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 8.4e-174 615.1 945 39.3
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 6.0e-172 609.0 953 38.8
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 2.6e-167 593.6 944 37.4
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 7.1e-165 585.5 949 38.0
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.5e-162 577.8 936 39.0
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 2.5e-162 577.0 851 40.9
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 3.3e-162 576.6 944 36.4
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.3e-161 574.7 949 37.7
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 1.7e-158 564.3 928 38.1
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 9.3e-157 558.5 949 37.7
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 4.6e-156 556.2 737 41.8
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 3.9e-155 553.1 942 36.1
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 2.5e-154 550.4 946 37.5
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 5.7e-154 549.3 853 38.8
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 1.1e-152 545.0 942 36.6
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 1.8e-152 544.3 956 37.2
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 2.4e-152 543.9 939 35.5
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 3.1e-152 543.5 947 35.8
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 1.5e-151 541.2 923 37.9
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 6.5e-150 535.8 752 40.6
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 1.2e-148 531.6 919 36.9
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 3.0e-147 526.9 938 37.1
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 5.1e-147 526.2 946 35.7
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 2.5e-146 523.9 944 36.8
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 1.3e-145 521.5 948 36.3
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 4.1e-144 516.5 938 36.6
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 5.3e-144 516.2 943 35.4
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.2e-143 515.0 922 36.2
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.0e-143 514.2 939 36.2
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 8.5e-142 508.8 946 36.3
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 8.5e-142 508.8 923 36.0
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 1.4e-141 508.1 928 36.0
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 1.0e-139 501.9 959 35.9
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 2.3e-139 500.7 933 35.9
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 2.6e-138 497.3 940 35.7
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 8.2e-137 492.3 941 34.3
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 1.4e-136 491.5 936 34.9
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.3e-134 485.0 934 34.6
DCAR_009432 Daucus carota HOM05D004345 ORTHO05D005192 5.0e-134 483.0 880 34.8
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 6.5e-134 482.6 918 35.1
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 9.4e-133 478.8 755 38.7
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.2e-132 478.4 944 32.9
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.1e-130 471.9 939 34.2
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 1.1e-130 471.9 912 34.5
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 3.1e-128 463.8 944 33.5
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 2.5e-125 454.1 980 34.4
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.0e-123 448.7 857 35.6
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 2.0e-122 444.5 960 35.0
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.5e-119 433.7 955 34.7
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 1.6e-116 424.9 586 41.8
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 2.3e-115 421.0 913 33.1
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 4.0e-115 420.2 952 31.3
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 5.7e-114 416.4 932 33.9
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 4.9e-113 413.3 941 33.3
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 8.3e-113 412.5 939 34.4
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 7.0e-112 409.5 761 34.3
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 2.9e-110 404.1 952 32.6
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 6.1e-108 396.4 947 32.2
Ah.03g148550 Amaranthus hybridus HOM05D004345 ORTHO05D005192 2.3e-107 394.4 949 30.3
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 6.8e-107 392.9 820 34.1
TAR383G0351 Trochodendron aralioides HOM05D004345 ORTHO05D005192 9.8e-106 389.0 435 49.2
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 8.3e-105 386.0 920 32.4
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 8.3e-105 386.0 950 31.3
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.4e-104 385.2 925 32.8
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 4.1e-104 383.6 876 32.3
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 5.4e-104 383.3 955 31.2
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 9.2e-104 382.5 981 31.1
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 4.7e-100 370.2 926 32.0
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 1.3e-97 362.1 943 30.8
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 2.2e-97 361.3 932 31.4
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 4.1e-96 357.1 928 30.2
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 1.1e-93 349.0 880 31.1
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 4.3e-93 347.1 530 39.6
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 6.2e-92 343.2 883 31.4
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 1.1e-91 342.4 944 30.5
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 1.5e-90 338.6 883 31.1
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 2.0e-90 338.2 983 30.6
PSO384G0273 Papaver somniferum HOM05D004345 ORTHO05D005192 5.8e-90 336.7 512 39.5
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 3.7e-89 334.0 792 30.7
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 1.1e-88 332.4 955 29.7
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 3.2e-88 330.9 963 30.4
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 3.5e-87 327.4 881 30.6
Oeu031657.1 Olea europaea HOM05D004345 ORTHO05D005192 3.9e-86 323.9 541 38.3
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 7.3e-85 319.7 686 32.8
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 6.2e-84 316.6 914 29.8
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 1.8e-83 315.1 599 33.9
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.4e-82 310.8 760 33.2
Thecc.05G018000 Theobroma cacao HOM05D004345 ORTHO05D005192 9.6e-77 292.7 350 43.1
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 3.6e-76 290.8 857 29.9
PSO384G0711 Papaver somniferum HOM05D004345 ORTHO05D005192 1.3e-73 282.3 531 36.9
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 5.6e-69 266.9 441 37.6
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.1e-67 261.2 458 37.8
Os09g0104700 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 3.1e-67 261.2 963 26.7
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 4.5e-66 257.3 660 30.0
ATR0022G053 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.1e-63 248.4 423 37.4
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 9.9e-58 229.6 937 24.8
C05p47510 Brassica napus HOM05D004345 ORTHO05D005192 4.9e-57 227.3 524 32.1
SEGI_03816 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 3.1e-51 208.0 752 28.1
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 6.9e-51 206.8 518 32.8
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 4.9e-49 200.7 353 36.0
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.5e-45 188.3 536 31.2
RcHm_v2.0_Chr6g0264721 Rosa chinensis HOM05D004345 ORTHO05D005192 2.1e-44 185.3 200 46.5
QL07p000983 Quercus lobata HOM05D004345 ORTHO05D005192 5.3e-43 180.6 186 51.6
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 8.5e-41 173.3 500 31.2
BcaB01g01503 Brassica carinata HOM05D004345 ORTHO05D005192 1.3e-36 159.5 354 31.1
BcaC05g28685 Brassica carinata HOM05D004345 ORTHO05D005192 9.4e-32 143.3 289 35.3
ATR0792G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 6.7e-30 137.1 382 31.2
SMO203G0127 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 1.1e-27 129.8 588 23.8
ATR0560G006 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.4e-27 129.4 222 38.7
ATR0964G004 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.1e-27 127.9 394 31.2
THA.LOC104807021 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 1.2e-26 126.3 336 31.0
Gorai.007G313800 Gossypium raimondii HOM05D004345 ORTHO05D005192 7.7e-26 123.6 171 39.8
Gohir.D11G289900 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.2e-25 122.1 171 39.2
SMO297G0008 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 2.3e-22 112.1 583 23.2
BolC5t33532H Brassica oleracea HOM05D004345 ORTHO05D005192 3.3e-21 108.2 252 31.3
Psat5g200920 Pisum sativum HOM05D000856 ORTHO05D005192 9.7e-21 106.7 112 44.6
BcaB06g25876 Brassica carinata HOM05D004345 ORTHO05D005192 8.2e-20 103.6 196 33.7
AagrBONN_evm.TU.Sc2ySwM_344.4665 Anthoceros agrestis HOM05D004345 ORTHO05D005192 8.5e-17 93.6 283 26.1
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 9.4e-16 90.1 144 40.3
SEGI_28583 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 2.0e-13 82.4 430 24.0
ATR0194G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.7e-12 78.2 305 27.5
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 5.9e-10 70.9 150 32.7
ATR0661G406 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.5e-08 66.2 209 29.2
ATR0560G003 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.5e-08 65.5 179 29.1
CDE04G1779 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 4.0e-06 58.2 85 35.3


User provided reference genes

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