Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 2.3e-122 442.2 212 100.0
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 2.8e-104 382.1 204 90.7
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.6e-27 127.1 215 35.8
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 3.6e-27 125.9 214 35.0
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.7e-27 125.6 214 35.0
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 4.4e-25 119.0 213 35.2
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 4.4e-25 119.0 208 37.0
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 4.4e-25 119.0 231 33.8
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 9.8e-25 117.9 208 36.1
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 1.3e-24 117.5 236 33.1
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.3e-24 117.5 218 34.4
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 1.7e-24 117.1 203 35.5
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 2.8e-24 116.3 206 33.0
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 1.8e-23 113.6 198 31.8
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 4.1e-23 112.5 198 31.8
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 7.0e-23 111.7 201 32.3
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 7.0e-23 111.7 202 36.1
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 7.0e-23 111.7 201 30.8
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 9.1e-23 111.3 216 36.1
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 1.2e-22 110.9 164 39.0
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 1.2e-22 110.9 210 34.3
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 5.9e-22 108.6 198 31.3
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 5.9e-22 108.6 198 31.3
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 5.9e-22 108.6 163 39.3
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 7.7e-22 108.2 171 36.8
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 7.7e-22 108.2 159 39.0
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 1.3e-21 107.5 232 31.9
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 1.7e-21 107.1 199 30.7
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.2e-21 106.7 246 31.3
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 2.2e-21 106.7 170 37.1
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 5.0e-21 105.5 250 30.4
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 5.0e-21 105.5 161 38.5
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 8.5e-21 104.8 167 40.7
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.9e-20 103.6 200 32.5
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 2.5e-20 103.2 169 37.9
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 3.2e-20 102.8 212 31.1
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 3.2e-20 102.8 160 36.2
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 9.4e-20 101.3 276 30.1
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 1.6e-19 100.5 183 34.4
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 2.7e-19 99.8 195 34.4
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 3.6e-19 99.4 174 35.6
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.6e-19 99.4 251 31.9
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 3.6e-19 99.4 161 37.9
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 4.7e-19 99.0 170 37.1
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 4.7e-19 99.0 167 35.9
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.7e-19 99.0 252 30.2
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 4.7e-19 99.0 161 37.9
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 6.1e-19 98.6 195 33.8
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 6.1e-19 98.6 155 36.8
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 6.1e-19 98.6 164 36.0
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 8.0e-19 98.2 198 31.8
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 8.0e-19 98.2 160 37.5
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 8.0e-19 98.2 229 31.0
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 1.0e-18 97.8 161 36.6
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.0e-18 97.8 161 37.3
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 1.4e-18 97.4 196 30.6
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 1.4e-18 97.4 160 38.1
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 1.8e-18 97.1 143 39.2
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 2.3e-18 96.7 163 38.0
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 2.3e-18 96.7 161 34.8
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 2.3e-18 96.7 170 37.1
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 3.0e-18 96.3 135 37.8
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 4.0e-18 95.9 172 34.9
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 4.0e-18 95.9 161 35.4
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 4.0e-18 95.9 163 35.0
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 4.0e-18 95.9 163 36.2
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 5.2e-18 95.5 174 36.2
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 5.2e-18 95.5 163 35.0
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 6.8e-18 95.1 161 35.4
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 6.8e-18 95.1 161 37.3
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 6.8e-18 95.1 161 37.3
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 1.2e-17 94.4 163 33.7
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 1.2e-17 94.4 187 32.1
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 1.2e-17 94.4 172 34.3
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 1.5e-17 94.0 144 37.5
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 2.0e-17 93.6 218 31.2
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.0e-17 93.6 159 36.5
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 2.0e-17 93.6 168 34.5
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 2.0e-17 93.6 162 35.8
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 3.4e-17 92.8 161 35.4
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 5.7e-17 92.0 201 33.8
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 5.7e-17 92.0 168 33.3
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 9.8e-17 91.3 162 34.0
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 9.8e-17 91.3 181 34.3
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 9.8e-17 91.3 197 33.0
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 9.8e-17 91.3 163 35.0
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 1.3e-16 90.9 162 31.5
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 1.7e-16 90.5 148 38.5
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 2.2e-16 90.1 180 32.2
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 2.2e-16 90.1 164 33.5
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 3.7e-16 89.4 149 35.6
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 4.9e-16 89.0 197 33.5
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 1.4e-15 87.4 161 32.3
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 5.4e-15 85.5 160 33.1
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 5.4e-15 85.5 243 27.6
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 7.0e-15 85.1 206 30.6
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.6e-14 84.0 140 34.3
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 2.7e-14 83.2 161 31.1
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 2.7e-14 83.2 139 36.7
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 2.7e-14 83.2 165 35.2
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 4.5e-14 82.4 190 31.1
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 7.7e-14 81.6 165 29.1
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.0e-13 81.3 140 35.0
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 1.0e-13 81.3 118 39.0
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 1.0e-13 81.3 161 32.9
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.0e-13 81.3 161 31.7
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 3.8e-13 79.3 107 38.3
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 3.8e-13 79.3 170 31.2
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 3.8e-13 79.3 168 36.3
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 6.6e-13 78.6 208 31.2
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 8.6e-13 78.2 133 34.6
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.1e-12 77.8 165 34.5
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 1.1e-12 77.8 155 32.3
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 1.5e-12 77.4 140 33.6
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 1.5e-12 77.4 176 31.8
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 1.9e-12 77.0 109 40.4
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.9e-12 77.0 142 35.2
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 4.3e-12 75.9 131 35.9
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 7.3e-12 75.1 131 35.9
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 7.3e-12 75.1 145 33.8
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 9.5e-12 74.7 220 30.0
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 4.7e-11 72.4 152 32.2
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 6.1e-11 72.0 102 38.2
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 1.4e-10 70.9 161 31.1
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 1.8e-10 70.5 100 36.0
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 2.3e-10 70.1 176 31.2


User provided reference genes

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