Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.0e-49 198.7 97 100.0
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.7e-40 169.1 87 93.1
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 8.4e-40 166.8 87 90.8
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 4.0e-26 121.3 83 69.9
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 6.0e-22 107.5 92 59.8
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 1.3e-21 106.3 80 62.5
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 3.0e-21 105.1 82 63.4
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 3.0e-21 105.1 82 63.4
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.0e-21 105.1 82 65.9
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 3.9e-21 104.8 82 62.2
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 5.1e-21 104.4 82 63.4
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 5.1e-21 104.4 82 62.2
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.7e-21 104.0 82 63.4
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.5e-20 102.1 85 63.5
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 3.3e-20 101.7 80 63.8
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 3.3e-20 101.7 86 57.0
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 3.3e-20 101.7 86 58.1
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 5.6e-20 100.9 82 56.1
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 1.3e-19 99.8 79 60.8
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.3e-19 99.8 85 62.4
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.3e-19 99.8 84 58.3
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.6e-19 99.4 78 64.1
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 1.6e-19 99.4 85 58.8
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 1.6e-19 99.4 85 58.8
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 2.1e-19 99.0 81 66.7
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 2.8e-19 98.6 80 62.5
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 3.7e-19 98.2 96 49.0
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 3.7e-19 98.2 84 56.0
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 4.8e-19 97.8 79 59.5
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 6.2e-19 97.4 80 60.0
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 8.2e-19 97.1 80 60.0
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 8.2e-19 97.1 80 60.0
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 8.2e-19 97.1 81 60.5
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.1e-18 96.7 81 63.0
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.1e-18 96.7 84 57.1
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.1e-18 96.7 78 61.5
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 1.1e-18 96.7 82 59.8
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.4e-18 96.3 93 49.5
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.8e-18 95.9 96 47.9
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.8e-18 95.9 96 47.9
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.8e-18 95.9 80 61.2
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 5.3e-18 94.4 81 55.6
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 6.9e-18 94.0 94 47.9
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 6.9e-18 94.0 81 59.3
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 6.9e-18 94.0 79 53.2
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 9.0e-18 93.6 80 55.0
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 1.2e-17 93.2 94 46.8
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 2.0e-17 92.4 73 57.5
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 2.0e-17 92.4 86 53.5
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 3.4e-17 91.7 79 58.2
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 3.4e-17 91.7 80 52.5
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 3.4e-17 91.7 71 59.2
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 7.6e-17 90.5 73 56.2
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 1.0e-16 90.1 57 73.7
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 1.3e-16 89.7 86 52.3
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.9e-16 88.6 59 69.5
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 6.5e-16 87.4 80 56.2
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 8.4e-16 87.0 91 56.0
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 8.4e-16 87.0 79 50.6
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 8.4e-16 87.0 76 52.6
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.4e-15 86.3 73 53.4
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 1.4e-15 86.3 86 50.0
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.9e-15 85.9 71 57.7
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.9e-15 85.9 71 57.7
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 2.5e-15 85.5 81 56.8
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 3.2e-15 85.1 79 48.1
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 4.2e-15 84.7 86 48.8
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 4.2e-15 84.7 88 46.6
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.1e-15 84.0 80 51.2
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 9.3e-15 83.6 69 52.2
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 9.3e-15 83.6 59 66.1
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 9.3e-15 83.6 59 66.1
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 1.2e-14 83.2 92 48.9
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.7e-14 82.0 59 64.4
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 3.5e-14 81.6 83 45.8
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 3.9e-13 78.2 73 49.3
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 3.9e-13 78.2 77 51.9
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 6.7e-13 77.4 59 61.0
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 8.7e-13 77.0 59 59.3
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 8.7e-13 77.0 84 50.0
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 1.1e-12 76.6 89 39.3
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.3e-12 74.7 78 47.4
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 5.7e-12 74.3 78 48.7
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.3e-11 73.2 91 41.8
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 2.2e-11 72.4 89 43.8
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.2e-11 72.4 78 46.2
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 2.8e-11 72.0 83 47.0
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 4.8e-11 71.2 65 53.8
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 6.3e-11 70.9 83 47.0
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 6.3e-11 70.9 78 48.7
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 8.2e-11 70.5 92 40.2
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 5.3e-10 67.8 102 37.3
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 6.9e-10 67.4 79 46.8
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 2.6e-09 65.5 86 38.4
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 2.6e-09 65.5 85 38.8
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 5.9e-09 64.3 60 51.7
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 1.0e-08 63.5 60 46.7
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.7e-08 62.8 58 51.7
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 8.5e-08 60.5 76 44.7
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 1.6e-06 56.2 84 31.0
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 2.7e-06 55.5 61 44.3


User provided reference genes

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