Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01432 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 9.2e-40 166.4 82 100.0
Atru.chr6.330 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-16 88.2 81 48.1
TWI31G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.0e-14 83.2 80 48.8
TWI18G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.0e-14 81.6 81 49.4
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-09 63.5 81 38.3
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-08 62.0 81 37.0
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-08 61.2 81 35.8
CiPaw.14G083000 Carya illinoinensis HOM05D000002 ORTHO05D000001 5.5e-08 60.8 75 42.7
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-08 60.5 81 35.8
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-08 60.1 81 37.0
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-08 60.1 81 35.8
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-08 60.1 81 37.0
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 59.7 74 37.8
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.3 81 34.6
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.3 81 37.0
Gohir.D05G339033 Gossypium hirsutum HOM05D000002 ORTHO05D000001 2.1e-07 58.9 81 39.5
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-07 58.9 81 37.0
SHI12476 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 58.9 81 37.0
CSS0000779 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.7e-07 58.5 81 35.8
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.5 81 34.6
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.2 81 34.6
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 58.2 81 35.8
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-07 57.4 81 34.6
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 81 35.8
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 81 34.6
SEGI_02381 Sequoiadendron giganteum HOM05D003001 ORTHO05D026104 7.9e-07 57.0 82 39.0
THA.LOC104803469 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.9e-07 57.0 81 38.3
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 81 34.6
QL11p039861 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-06 56.2 74 41.9
THA.LOC104810237 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 56.2 81 34.6
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.8e-06 55.8 82 34.1
Hma1.2p1_0227F.1_g096220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 55.8 75 40.0
Hma1.2p1_0775F.1_g216430 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 55.8 81 33.3
PSO170G2828 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 55.8 80 37.5
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 1.8e-06 55.8 81 35.8
SHI44612 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 81 34.6
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-06 55.5 81 35.8
PSO384G4495 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-06 55.5 81 35.8
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-06 55.5 81 37.0
THA.LOC104800056 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.3e-06 55.5 81 37.0
SHI44368 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.1 81 34.6
PSO170G1587 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 80 37.5
PSO190G0003 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 81 34.6
PSO782G0008 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 80 37.5
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-06 54.7 81 34.6
Ca_19987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.1e-06 54.3 81 35.8
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-06 54.3 82 30.5
SHI27923 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-06 54.3 79 34.2
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 37.0
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 37.0
CSS0031459 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 33.3
CAN.G74.41 Capsicum annuum HOM05D000696 ORTHO05D001068 6.7e-06 53.9 74 40.5
Dinv00781 Davidia involucrata HOM05D000002 ORTHO05D000001 6.7e-06 53.9 75 34.7
PSO063G0565 Papaver somniferum HOM05D000002 ORTHO05D000001 6.7e-06 53.9 80 36.2
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 80 36.2
SHI00983 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 79 32.9
SHI11263 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 38.3
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 34.6
SHI15966 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 37.0
SHI32854 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-06 53.9 81 32.1
AUR62010047 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.7e-06 53.5 82 32.9
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 53.5 81 34.6
PSO478G4166 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 53.5 80 36.2
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-06 53.5 81 34.6
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-06 53.5 81 34.6


User provided reference genes

Program Settings