Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 9.9e-94 346.7 162 100.0
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.9e-92 342.4 162 98.8
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 8.1e-80 300.4 150 94.7
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 2.4e-71 272.3 151 80.8
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 2.4e-71 272.3 151 84.8
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 1.2e-70 270.0 150 82.0
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 1.2e-70 270.0 151 81.5
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 1.2e-70 270.0 150 82.0
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 2.0e-70 269.2 151 80.8
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 3.4e-70 268.5 151 80.8
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 3.4e-70 268.5 151 81.5
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 4.9e-69 264.6 150 78.7
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 4.9e-69 264.6 150 80.0
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 6.4e-69 264.2 150 79.3
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 8.4e-69 263.8 150 81.3
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 1.1e-68 263.5 150 79.3
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 1.4e-68 263.1 152 77.6
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 1.4e-68 263.1 152 77.6
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 1.9e-68 262.7 150 80.0
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 2.4e-68 262.3 150 78.0
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 2.4e-68 262.3 151 79.5
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 2.4e-68 262.3 150 78.7
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 2.4e-68 262.3 154 78.6
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 3.2e-68 261.9 152 77.0
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 3.2e-68 261.9 151 78.1
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 4.2e-68 261.5 152 77.6
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 4.2e-68 261.5 151 78.1
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 5.5e-68 261.2 151 78.8
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 5.5e-68 261.2 151 78.1
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 5.5e-68 261.2 150 80.0
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 5.5e-68 261.2 152 77.6
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 1.2e-67 260.0 151 77.5
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 1.2e-67 260.0 150 78.7
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 1.2e-67 260.0 152 77.0
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 1.6e-67 259.6 150 80.0
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 2.1e-67 259.2 150 77.3
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 2.7e-67 258.8 151 80.1
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 2.7e-67 258.8 150 77.3
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 2.7e-67 258.8 152 76.3
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 3.5e-67 258.5 150 77.3
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 3.5e-67 258.5 150 80.0
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 3.5e-67 258.5 150 78.7
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 3.5e-67 258.5 151 77.5
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 3.5e-67 258.5 152 75.7
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 6.0e-67 257.7 150 79.3
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 6.0e-67 257.7 150 78.7
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 6.0e-67 257.7 150 80.0
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 6.0e-67 257.7 151 78.1
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 6.0e-67 257.7 150 78.7
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 7.9e-67 257.3 150 79.3
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 7.9e-67 257.3 150 79.3
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 7.9e-67 257.3 150 79.3
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 7.9e-67 257.3 150 78.0
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 1.3e-66 256.5 150 77.3
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 1.3e-66 256.5 151 77.5
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 1.3e-66 256.5 151 75.5
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 1.3e-66 256.5 150 79.3
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 1.8e-66 256.1 150 78.7
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.8e-66 256.1 150 77.3
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 1.8e-66 256.1 150 77.3
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 2.3e-66 255.8 150 79.3
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 6.7e-66 254.2 150 78.0
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 6.7e-66 254.2 150 78.0
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 8.7e-66 253.8 143 77.6
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 8.7e-66 253.8 151 76.2
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.1e-65 253.4 150 78.0
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 1.1e-65 253.4 151 76.2
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 1.1e-65 253.4 151 76.2
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 1.5e-65 253.1 152 76.3
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 1.9e-65 252.7 152 77.6
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 1.9e-65 252.7 150 76.7
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 2.5e-65 252.3 150 78.0
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 2.5e-65 252.3 150 77.3
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.5e-65 252.3 150 77.3
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.5e-65 252.3 150 77.3
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 3.3e-65 251.9 153 77.1
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 5.6e-65 251.1 150 76.7
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 9.6e-65 250.4 152 76.3
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.3e-64 250.0 153 75.8
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 1.3e-64 250.0 151 76.2
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 1.3e-64 250.0 150 76.7
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 1.6e-64 249.6 151 76.2
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 2.8e-64 248.8 151 74.8
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 3.7e-64 248.4 151 74.8
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 3.7e-64 248.4 152 74.3
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 6.2e-64 247.7 150 76.0
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.1e-63 246.9 150 76.0
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 2.4e-63 245.7 150 74.0
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 6.9e-63 244.2 151 76.2
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.2e-62 243.4 153 73.2
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 3.4e-62 241.9 147 74.1
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 3.4e-62 241.9 154 71.4
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 6.5e-61 237.7 153 69.3
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 5.5e-60 234.6 150 70.0
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.6e-59 233.0 142 74.6
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 1.8e-58 229.6 153 73.2
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 1.9e-57 226.1 151 67.5
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 3.3e-57 225.3 150 66.0
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 4.3e-57 224.9 138 75.4
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.1e-55 220.3 152 72.4
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 6.5e-53 211.1 117 82.1
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 1.9e-52 209.5 142 63.4
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 1.8e-50 203.0 148 64.2
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 8.7e-50 200.7 143 62.2
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 1.4e-44 183.3 142 56.3
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 5.1e-42 174.9 150 58.7
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 2.6e-38 162.5 92 77.2
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 5.9e-38 161.4 144 52.8
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 1.6e-35 153.3 89 78.7
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 2.0e-33 146.4 149 49.7
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 5.0e-21 105.1 57 80.7
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.5e-20 102.8 63 73.0
Haze_08452 Corylus avellana HOM05D014029 ORTHO05D044818 5.7e-09 65.1 46 58.7


User provided reference genes

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