Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 0.0e+00 1501.5 741 100.0
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 4.3e-253 878.2 724 63.0
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 1.1e-235 820.5 717 59.1
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 2.5e-229 799.3 734 57.8
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 2.2e-225 786.2 734 56.9
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 5.0e-225 785.0 719 55.9
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 2.2e-212 743.0 721 52.7
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 5.3e-211 738.4 720 52.2
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.4e-208 727.6 723 51.6
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 5.7e-205 718.4 710 53.5
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 5.0e-201 705.3 720 51.9
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.7e-199 699.5 677 53.6
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 4.7e-199 698.7 683 52.1
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 2.3e-198 696.4 723 51.5
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 8.3e-196 688.0 729 51.6
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 5.9e-194 681.8 717 50.8
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 1.7e-193 680.2 720 50.0
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 8.5e-193 677.9 722 50.0
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.1e-192 677.6 676 52.1
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 4.2e-192 675.6 716 49.7
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 8.0e-191 671.4 716 49.6
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 3.0e-190 669.5 714 49.4
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 6.8e-190 668.3 712 52.1
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 6.8e-190 668.3 720 49.4
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.7e-188 663.7 709 50.4
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 4.9e-188 662.1 717 48.8
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.4e-187 659.8 721 49.2
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 7.0e-187 658.3 716 49.2
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 9.2e-187 657.9 721 49.1
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.6e-186 657.1 721 49.2
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.6e-186 657.1 745 48.1
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 8.6e-185 651.4 718 48.9
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 1.1e-184 651.0 715 49.2
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 1.5e-184 650.6 719 48.3
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 2.5e-184 649.8 717 48.3
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 1.6e-183 647.1 716 46.9
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 2.1e-183 646.7 711 48.0
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 1.8e-182 643.7 714 49.6
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 4.0e-182 642.5 716 49.6
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 6.8e-182 641.7 735 47.8
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 8.9e-182 641.3 716 46.6
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 4.4e-181 639.0 683 50.7
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 2.9e-180 636.3 726 46.8
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 2.9e-180 636.3 713 46.8
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 8.3e-180 634.8 657 52.1
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 5.9e-178 628.6 688 50.6
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 1.7e-177 627.1 725 47.2
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 2.3e-177 626.7 686 47.2
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 3.3e-176 622.9 712 48.5
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 3.6e-175 619.4 716 47.6
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.7e-175 619.0 703 47.1
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 5.2e-174 615.5 755 46.1
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 2.6e-173 613.2 728 46.7
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 5.8e-173 612.1 727 46.6
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 1.1e-171 607.8 741 45.2
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.4e-171 607.4 718 46.4
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 7.0e-171 605.1 709 44.9
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.7e-170 603.2 730 44.9
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 1.0e-169 601.3 722 45.3
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 1.3e-169 600.9 594 54.4
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 8.6e-169 598.2 703 46.2
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 3.3e-168 596.3 708 45.5
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.1e-167 593.6 721 45.5
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 1.4e-166 590.9 718 44.8
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.3e-166 590.1 719 45.2
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 3.1e-166 589.7 720 46.8
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 4.4e-165 585.9 678 47.6
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 4.4e-165 585.9 770 41.9
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 6.4e-164 582.0 675 47.6
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 5.4e-163 578.9 723 45.4
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 5.4e-163 578.9 715 45.0
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 2.7e-162 576.6 715 44.6
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 6.0e-162 575.5 721 44.5
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.0e-161 574.7 715 44.8
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 1.1e-160 571.2 726 44.1
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 1.5e-160 570.9 716 43.3
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.5e-160 570.1 721 44.1
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 4.7e-159 565.8 722 44.0
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 8.1e-159 565.1 719 44.4
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 6.8e-158 562.0 742 43.7
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 4.9e-156 555.8 727 43.3
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 4.9e-156 555.8 673 45.6
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.1e-155 554.7 687 44.8
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 1.1e-155 554.7 697 45.6
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 3.2e-155 553.1 723 44.7
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 7.8e-154 548.5 729 42.9
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.2e-151 541.2 724 42.3
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 6.2e-151 538.9 667 45.4
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.8e-150 537.3 671 42.8
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 5.8e-149 532.3 725 42.1
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 3.3e-144 516.5 687 41.3
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 8.1e-143 511.9 708 42.2
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 9.9e-141 505.0 694 41.5
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 7.1e-139 498.8 768 38.3
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.1e-138 497.3 624 45.2
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 6.2e-135 485.7 772 37.8
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 5.3e-134 482.6 659 42.8
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.1e-131 474.9 771 37.9
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 9.3e-131 471.9 586 45.4
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 2.5e-123 447.2 512 48.6
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 5.5e-123 446.0 546 46.3
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 4.6e-122 443.0 772 38.1
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 2.1e-119 434.1 714 37.4
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 8.7e-113 412.1 524 46.4
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 1.1e-112 411.8 524 46.2
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 2.5e-107 394.0 653 37.7
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 4.4e-104 383.3 727 34.5
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.3e-103 381.7 426 48.4
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 9.1e-102 375.6 506 43.5
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.2e-101 375.2 494 44.5
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 6.1e-98 362.8 826 32.0
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.2e-93 348.6 389 45.2
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.3e-87 328.6 535 39.1
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 7.0e-86 322.8 280 52.9
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 1.7e-84 318.2 263 55.9
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 3.0e-81 307.4 268 55.2
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 2.0e-69 268.1 272 49.3
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 2.8e-66 257.7 201 57.2
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 8.9e-65 252.7 286 46.9
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 8.0e-58 229.6 331 43.5
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 7.1e-46 189.9 114 71.9
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 9.0e-33 146.4 137 59.9
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 9.9e-24 116.3 128 50.0
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.3e-23 115.9 277 37.2
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 1.4e-22 112.5 132 50.0
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 1.4e-22 112.5 155 43.2
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 2.4e-22 111.7 134 49.3
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.6e-21 109.0 142 50.0
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.8e-17 95.5 85 54.1
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 8.7e-12 76.6 148 39.2
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 6.2e-10 70.5 58 60.3
A08p10430 Brassica napus HOM05D005685 ORTHO05D007046 1.4e-06 59.3 114 31.6
SEGI_05558 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.4e-06 59.3 120 29.2
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 3.2e-06 58.2 41 65.9


User provided reference genes

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