Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01260 Aquilegia oxysepala HOM05D002936 ORTHO05D003306 9.1e-96 353.6 182 100.0
Aqoxy4G01224 Aquilegia oxysepala HOM05D002936 ORTHO05D003306 4.4e-58 228.4 121 97.5
TAR626G1214 Trochodendron aralioides HOM05D002936 ORTHO05D003306 4.6e-23 112.1 129 54.3
Nn1g06678 Nelumbo nucifera HOM05D002936 ORTHO05D003306 6.2e-20 101.7 134 48.5
Nn1g03977 Nelumbo nucifera HOM05D002936 ORTHO05D003306 2.0e-18 96.7 127 50.4
TAR629G0587 Trochodendron aralioides HOM05D002936 ORTHO05D003306 5.8e-18 95.1 130 48.5
ATR0693G079 Amborella trichopoda HOM05D002936 ORTHO05D003306 2.7e-15 86.3 73 56.2
Dinv22374 Davidia involucrata HOM05D002936 ORTHO05D003306 3.5e-15 85.9 131 47.3
MBI18_g23702_MAGBIO Magnolia biondii HOM05D002936 ORTHO05D003306 1.8e-14 83.6 133 45.9
CSS0006328 Camellia sinensis var. sinensis HOM05D002936 ORTHO05D003306 2.3e-14 83.2 122 46.7
CSS0036284 Camellia sinensis var. sinensis HOM05D002936 ORTHO05D003306 3.0e-14 82.8 122 46.7
MBI02_g19251_MAGBIO Magnolia biondii HOM05D002936 ORTHO05D003306 1.5e-13 80.5 134 44.0
Prupe.4G187300 Prunus persica HOM05D002936 ORTHO05D003306 4.3e-13 79.0 126 49.2
CSS0040118 Camellia sinensis var. sinensis HOM05D002936 ORTHO05D003306 1.4e-11 73.9 122 46.7
Rhsim04G0018900 Rhododendron simsii HOM05D002936 ORTHO05D003306 6.9e-11 71.6 161 36.0
RcHm_v2.0_Chr5g0034871 Rosa chinensis HOM05D002936 ORTHO05D003306 9.0e-11 71.2 125 43.2
Lj1A850T64 Lonicera japonica HOM05D002936 ORTHO05D003306 2.0e-10 70.1 118 45.8
CANSAT11G1341 Cannabis sativa HOM05D006800 ORTHO05D008478 3.4e-10 69.3 127 44.9
CANSAT11G1261 Cannabis sativa HOM05D002936 ORTHO05D003306 7.6e-10 68.2 127 42.5
FvH4_3g20720 Fragaria vesca HOM05D002936 ORTHO05D003306 7.6e-10 68.2 134 38.8
PGSC0003DMG400019254 Solanum tuberosum HOM05D002936 ORTHO05D003306 9.9e-10 67.8 125 43.2
FAN11G3821 Fragaria x ananassa HOM05D002936 ORTHO05D003306 3.8e-09 65.9 133 38.3
Haze_09502 Corylus avellana HOM05D002936 ORTHO05D003306 6.4e-09 65.1 124 42.7
Nitab4.5_0000815g0070 Nicotiana tabacum HOM05D002936 ORTHO05D003306 6.4e-09 65.1 124 45.2
Actinidia09978 Actinidia chinensis HOM05D002936 ORTHO05D003306 1.4e-08 63.9 121 41.3
Aqoxy1G02630 Aquilegia oxysepala HOM05D002936 ORTHO05D003306 1.4e-08 63.9 108 39.8
Cfa020531 Carpinus fangiana HOM05D002936 ORTHO05D003306 1.4e-08 63.9 121 43.0
ClCG10G006690 Citrullus lanatus HOM05D002936 ORTHO05D003306 1.4e-08 63.9 119 42.0
Hma1.2p1_1143F.1_g261170 Hydrangea macrophylla HOM05D002936 ORTHO05D003306 1.4e-08 63.9 113 44.2
Duzib213G1045 Durio zibethinus HOM05D002936 ORTHO05D003306 1.9e-08 63.5 117 40.2
MD03G1222400 Malus domestica HOM05D002936 ORTHO05D003306 1.9e-08 63.5 126 43.7
Ca_01816_v3 Cicer arietinum L. HOM05D002936 ORTHO05D003306 3.2e-08 62.8 123 43.1
Thecc.07G075000 Theobroma cacao HOM05D002936 ORTHO05D003306 3.2e-08 62.8 116 38.8
vmacro09548 Vaccinium macrocarpon HOM05D002936 ORTHO05D003306 4.2e-08 62.4 120 37.5
PSO541G0810 Papaver somniferum HOM05D002936 ORTHO05D003306 5.5e-08 62.0 131 39.7
Psat5g246080 Pisum sativum HOM05D002936 ORTHO05D003306 9.3e-08 61.2 117 40.2
Sed0022192 Sechium edule HOM05D002936 ORTHO05D003306 1.2e-07 60.8 121 41.3
CsaV3_3G006080 Cucumis sativus L. HOM05D002936 ORTHO05D003306 1.6e-07 60.5 71 53.5
Medtr2g080040 Medicago truncatula HOM05D002936 ORTHO05D003306 1.6e-07 60.5 120 40.8
MELO3C016541.2 Cucumis melo HOM05D002936 ORTHO05D003306 2.7e-07 59.7 119 39.5
QL08p019229 Quercus lobata HOM05D002936 ORTHO05D003306 3.5e-07 59.3 115 45.2
MD03G1069500 Malus domestica HOM05D000073 ORTHO05D000033 4.6e-07 58.9 120 41.7
PSO675G8566 Papaver somniferum HOM05D002936 ORTHO05D003306 4.6e-07 58.9 131 38.9
FAN25G1313 Fragaria x ananassa HOM05D002936 ORTHO05D003306 7.9e-07 58.2 113 39.8
SEGI_13840 Sequoiadendron giganteum HOM05D002936 ORTHO05D003306 7.9e-07 58.2 93 43.0
FAN21G2505 Fragaria x ananassa HOM05D002936 ORTHO05D003306 1.0e-06 57.8 122 41.0
Sopen07g031600 Solanum pennellii HOM05D002936 ORTHO05D003306 1.0e-06 57.8 95 43.2
Solyc07g063430.3 Solanum lycopersicum HOM05D002936 ORTHO05D003306 1.3e-06 57.4 125 38.4
Duzib268G0023 Durio zibethinus HOM05D002936 ORTHO05D003306 1.8e-06 57.0 118 38.1
Nitab4.5_0001204g0120 Nicotiana tabacum HOM05D002936 ORTHO05D003306 1.8e-06 57.0 123 40.7
Potri.001G404600 Populus trichocarpa HOM05D002936 ORTHO05D003306 1.8e-06 57.0 108 38.0
Manes.15G084600 Manihot esculenta HOM05D002936 ORTHO05D003306 2.3e-06 56.6 121 38.0
CDE05G3365 Ceratophyllum demersum HOM05D002936 ORTHO05D003306 3.0e-06 56.2 110 37.3
Cc05_g12530 Coffea canephora HOM05D002936 ORTHO05D003306 3.9e-06 55.8 128 41.4
Eucgr.F01090 Eucalyptus grandis HOM05D002936 ORTHO05D003306 5.1e-06 55.5 109 40.4
Potri.011G123700 Populus trichocarpa HOM05D002936 ORTHO05D003306 5.1e-06 55.5 108 38.9
Atru.chr2.2770 Acer truncatum HOM05D002936 ORTHO05D003306 6.7e-06 55.1 117 36.8
Gohir.D05G360200 Gossypium hirsutum HOM05D002936 ORTHO05D003306 6.7e-06 55.1 115 38.3
Sabra11G0109100 Salix brachista HOM05D002936 ORTHO05D003306 6.7e-06 55.1 108 38.0
Gorai.009G432500 Gossypium raimondii HOM05D002936 ORTHO05D003306 8.7e-06 54.7 115 38.3


User provided reference genes

Program Settings