Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.7e-78 295.8 140 100.0
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 2.9e-25 119.0 147 48.3
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 8.4e-25 117.5 147 44.2
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 4.6e-23 111.7 146 48.6
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 6.0e-23 111.3 146 48.6
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 3.9e-22 108.6 146 48.6
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 1.1e-21 107.1 148 41.2
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.9e-21 106.3 113 54.0
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 9.6e-21 104.0 146 44.5
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-20 103.6 146 47.3
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.6e-20 103.2 153 45.8
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 4.8e-20 101.7 147 46.3
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 4.8e-20 101.7 139 46.8
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 8.1e-20 100.9 150 45.3
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 2.4e-19 99.4 150 44.7
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-19 99.4 146 41.8
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-19 99.4 146 42.5
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 2.4e-19 99.4 146 41.1
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.1e-19 99.0 146 43.2
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 4.0e-19 98.6 150 44.7
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 4.0e-19 98.6 148 39.9
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 4.0e-19 98.6 148 39.9
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 4.0e-19 98.6 154 39.6
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 4.0e-19 98.6 154 39.6
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 6.9e-19 97.8 146 43.2
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 9.0e-19 97.4 150 44.0
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 9.0e-19 97.4 150 44.0
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.0e-19 97.4 137 44.5
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.0e-19 97.4 137 44.5
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-18 97.1 145 44.1
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-18 97.1 146 43.2
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.2e-18 97.1 137 44.5
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.5e-18 96.7 137 44.5
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 2.6e-18 95.9 136 44.9
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-18 95.9 139 45.3
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-18 95.9 145 42.8
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.6e-18 95.9 142 45.1
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.4e-18 95.5 146 44.5
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-17 94.0 138 42.8
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-17 93.2 135 45.9
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-17 93.2 147 43.5
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 1.7e-17 93.2 153 40.5
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 2.2e-17 92.8 138 44.2
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 2.2e-17 92.8 138 44.2
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 6.5e-17 91.3 146 42.5
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 8.4e-17 90.9 136 43.4
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.1e-16 90.5 146 41.1
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.1e-16 90.5 146 42.5
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 1.1e-16 90.5 128 44.5
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-16 90.5 147 42.2
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 1.9e-16 89.7 143 40.6
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 2.5e-16 89.4 128 43.8
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-16 89.4 143 40.6
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-16 89.4 146 41.8
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 5.5e-16 88.2 137 46.0
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 5.5e-16 88.2 137 46.0
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 9.3e-16 87.4 147 38.8
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 9.3e-16 87.4 111 48.6
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.3e-16 87.4 148 43.9
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-15 87.0 146 41.8
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 2.1e-15 86.3 140 45.0
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 2.1e-15 86.3 119 44.5
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 2.1e-15 86.3 139 42.4
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 2.1e-15 86.3 139 42.4
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 6.0e-15 84.7 147 40.1
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 1.3e-14 83.6 128 40.6
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 1.3e-14 83.6 141 41.8
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.3e-14 82.8 113 45.1
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 3.0e-14 82.4 149 43.0
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.5e-13 79.3 146 39.0
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.5e-13 79.3 129 41.1
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 4.3e-13 78.6 121 38.0
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 5.7e-13 78.2 140 35.7
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.3e-12 77.0 113 41.6
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.1e-12 76.3 147 37.4
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 3.7e-12 75.5 126 37.3
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.4e-11 73.6 126 38.9
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-11 73.6 137 38.7
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.8e-11 73.2 125 36.8
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 3.1e-11 72.4 127 37.0
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 5.3e-11 71.6 149 34.9
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 6.9e-11 71.2 85 49.4
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.0e-10 69.7 115 39.1
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 3.4e-10 68.9 89 43.8
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 4.5e-10 68.6 130 38.5
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 5.9e-10 68.2 125 36.8
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.2e-09 66.2 55 63.6
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.9e-09 65.9 53 64.2
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-08 63.5 88 44.3
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.9e-08 63.2 85 49.4
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 7.2e-08 61.2 146 34.9
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 9.3e-08 60.8 114 36.8
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 1.2e-07 60.5 132 31.8
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.2e-07 60.5 117 30.8
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.6e-07 58.9 130 30.8
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 3.6e-07 58.9 83 43.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 4.6e-07 58.5 132 31.1
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-07 58.2 142 35.9
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 1.3e-06 57.0 143 32.2
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 3.0e-06 55.8 93 34.4
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 3.9e-06 55.5 92 35.9
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 3.9e-06 55.5 55 47.3
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 3.9e-06 55.5 121 32.2
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 3.9e-06 55.5 89 34.8
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 5.1e-06 55.1 134 30.6
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 5.1e-06 55.1 119 30.3
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.7e-06 54.7 130 30.0
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.7e-06 54.7 112 33.9
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 8.7e-06 54.3 93 33.3
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 8.7e-06 54.3 93 33.3


User provided reference genes

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