Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 0.0e+00 1635.2 928 100.0
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 2.4e-245 852.8 952 56.1
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 6.6e-243 844.7 835 58.9
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.1e-232 810.8 958 52.0
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 6.9e-232 808.1 935 52.9
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 9.0e-232 807.7 955 52.7
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 9.3e-229 797.7 927 53.1
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 1.3e-227 793.9 938 52.8
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 6.6e-227 791.6 930 53.9
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 2.8e-225 786.2 951 51.9
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 1.4e-224 783.9 956 52.4
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.4e-224 783.1 930 52.6
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 4.5e-223 778.9 957 51.1
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 5.8e-223 778.5 933 51.2
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.7e-222 776.9 937 51.9
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.7e-222 776.9 817 56.8
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.2e-222 776.5 958 51.6
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 1.9e-221 773.5 949 51.7
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 9.9e-215 751.1 1041 47.8
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.4e-214 748.4 914 52.1
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 2.5e-213 746.5 962 51.0
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 1.8e-211 740.3 1047 47.7
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.1e-208 731.1 940 51.0
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.4e-208 729.9 978 48.8
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 3.1e-208 729.6 947 49.4
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 4.0e-208 729.2 975 50.1
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 1.3e-206 724.2 765 56.2
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.7e-206 723.8 953 50.3
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 6.5e-206 721.8 969 49.1
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 1.1e-205 721.1 1025 47.1
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.2e-204 717.6 931 49.6
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 2.7e-204 716.5 976 49.0
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 3.5e-204 716.1 958 50.0
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.5e-204 716.1 948 49.4
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 1.3e-203 714.1 948 49.3
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.5e-202 710.7 939 49.3
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 7.4e-202 708.4 956 52.7
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 2.2e-201 706.8 953 49.4
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.8e-201 706.4 1016 46.5
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.8e-201 706.4 980 48.3
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 3.7e-201 706.1 858 51.0
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.4e-200 704.1 948 47.7
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 1.8e-200 703.7 1121 44.3
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 2.4e-200 703.4 946 48.0
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 5.3e-200 702.2 953 48.4
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 9.0e-200 701.4 966 46.9
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 7.7e-199 698.4 953 48.1
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.7e-198 697.2 1024 46.1
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 2.9e-198 696.4 1015 46.6
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.9e-197 693.7 938 48.5
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 3.2e-197 693.0 863 49.7
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 1.6e-196 690.6 951 48.8
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 6.1e-196 688.7 947 47.9
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 7.9e-196 688.3 1017 45.4
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 2.3e-195 686.8 860 50.5
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 3.0e-195 686.4 935 48.1
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 3.0e-195 686.4 947 48.0
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 3.9e-195 686.0 945 50.3
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 5.1e-195 685.6 847 50.1
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 5.1e-195 685.6 938 46.6
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 6.7e-195 685.3 848 50.9
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 6.7e-195 685.3 932 48.4
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.5e-194 684.1 1000 45.5
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.7e-193 680.6 991 46.7
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 8.2e-193 678.3 949 47.6
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 2.4e-192 676.8 1030 46.5
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 3.1e-192 676.4 815 51.9
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 9.1e-192 674.9 949 47.3
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 4.5e-191 672.5 949 47.1
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 1.7e-190 670.6 1022 44.4
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.8e-190 669.5 963 47.6
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.1e-189 667.9 954 48.0
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 2.5e-189 666.8 817 50.2
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 2.5e-189 666.8 933 47.6
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 5.5e-189 665.6 1025 43.9
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.0e-187 659.8 952 47.5
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 1.7e-185 654.1 961 46.2
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 2.2e-185 653.7 941 46.3
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 5.3e-184 649.0 857 48.1
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.9e-182 643.3 340 97.9
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 8.8e-179 631.7 978 44.5
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 4.4e-178 629.4 828 47.3
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 1.3e-177 627.9 1009 42.9
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 2.2e-177 627.1 838 48.7
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.2e-177 627.1 943 47.3
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 1.1e-176 624.8 829 50.2
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 1.8e-176 624.0 1059 41.3
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 2.4e-176 623.6 947 46.4
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 5.3e-176 622.5 841 46.7
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 3.5e-175 619.8 948 44.3
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 4.5e-175 619.4 948 44.5
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 5.9e-175 619.0 828 50.5
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 1.3e-174 617.8 945 44.7
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-174 617.1 847 45.2
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 2.2e-174 617.1 844 46.2
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 2.2e-174 617.1 844 46.2
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.5e-174 615.5 948 43.1
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 8.5e-174 615.1 847 45.6
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 1.5e-173 614.4 947 43.7
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.6e-172 610.9 946 46.2
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.6e-172 610.9 866 47.6
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 2.7e-172 610.1 934 44.6
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.7e-172 610.1 837 46.5
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 8.0e-172 608.6 825 47.0
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.4e-171 607.8 826 46.0
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.4e-171 607.8 831 46.7
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 5.2e-171 605.9 976 43.3
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 6.8e-171 605.5 879 45.5
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.3e-169 601.3 936 42.9
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.7e-169 600.9 866 46.2
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 1.1e-168 598.2 919 43.4
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.4e-168 597.8 859 46.1
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.4e-168 597.0 829 46.0
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 7.0e-168 595.5 878 44.6
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.0e-167 594.0 908 43.3
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.0e-167 594.0 878 44.5
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 7.7e-167 592.0 827 46.8
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 7.7e-167 592.0 816 46.3
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 3.8e-166 589.7 928 44.4
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 4.7e-164 582.8 828 45.3
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.4e-160 570.5 874 43.8
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 7.0e-160 568.9 837 46.8
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 8.6e-158 562.0 826 43.7
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 3.3e-157 560.1 850 43.8
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 6.3e-153 545.8 799 44.3
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 1.3e-142 511.5 948 42.8
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 9.8e-138 495.4 957 40.3
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 2.4e-136 490.7 975 39.6
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 4.0e-131 473.4 826 41.4
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 4.3e-125 453.4 896 38.1
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 2.7e-119 434.1 832 39.5
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.5e-117 428.3 843 37.6
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.5e-117 428.3 843 37.6
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 4.8e-108 396.7 683 40.7
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.5e-101 375.2 564 46.1
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 2.1e-95 354.8 842 35.2
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 7.9e-87 326.2 370 52.4
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.3e-77 293.9 285 54.7
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 1.1e-75 289.3 347 51.3
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 2.9e-73 281.2 961 28.5
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.3e-70 271.6 262 58.0
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.0e-62 246.1 380 45.3
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 1.3e-60 239.2 476 38.4
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.1e-59 233.0 407 41.0
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 2.3e-46 191.8 138 71.0
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 9.1e-43 179.9 258 41.9
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 3.2e-35 154.8 191 49.7
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 1.1e-32 146.4 119 66.4
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.9e-32 145.6 128 63.3
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.3e-32 144.4 92 82.6
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 6.2e-31 140.6 199 46.7
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 2.3e-30 138.7 156 47.4
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 4.9e-28 131.0 180 48.3
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 6.0e-26 124.0 85 71.8
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 1.3e-25 122.9 219 44.3
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 9.5e-24 116.7 112 51.8
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 2.3e-22 112.1 79 69.6
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 4.9e-20 104.4 118 48.3
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 6.4e-20 104.0 89 60.7
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 7.1e-19 100.5 70 71.4
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 9.2e-19 100.1 57 87.7
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 1.2e-18 99.8 68 67.6
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 2.7e-18 98.6 89 58.4
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 7.8e-18 97.1 63 77.8
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 6.6e-17 94.0 61 80.3
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.4e-14 86.3 60 73.3
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.1e-14 85.1 138 44.2
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 4.0e-14 84.7 69 63.8
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 3.7e-12 78.2 98 48.0
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 6.4e-12 77.4 57 61.4
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 1.9e-11 75.9 99 51.5
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 3.2e-11 75.1 126 41.3
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 9.2e-11 73.6 66 56.1
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 2.7e-10 72.0 309 26.5
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 5.1e-09 67.8 100 47.0
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 8.6e-09 67.0 73 46.6
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 8.6e-09 67.0 92 42.4
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 3.3e-08 65.1 60 56.7
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.4e-06 58.9 53 62.3
MBI19_g07393_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 5.2e-06 57.8 38 65.8
MBI19_g13594_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 5.2e-06 57.8 38 65.8
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 8.9e-06 57.0 97 34.0


User provided reference genes

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