Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.7e-201 705.7 338 100.0
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 4.6e-170 601.3 319 86.5
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 4.6e-170 601.3 319 86.5
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 3.0e-169 598.6 328 85.1
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.6e-167 592.8 322 84.5
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 3.7e-167 591.7 332 82.8
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 4.8e-167 591.3 323 83.9
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.8e-166 589.3 319 85.6
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 2.4e-166 589.0 319 83.7
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 5.3e-166 587.8 332 81.3
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.2e-165 586.6 325 84.0
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 2.0e-165 585.9 324 82.4
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.4e-165 585.1 320 84.4
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 4.5e-165 584.7 320 84.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 1.3e-164 583.2 323 83.3
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.3e-164 583.2 319 83.4
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.3e-164 583.2 319 83.7
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.7e-164 582.8 324 83.6
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 3.8e-164 581.6 330 83.3
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 5.0e-164 581.3 333 79.9
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.5e-164 580.9 315 84.8
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 8.5e-164 580.5 319 82.8
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 8.5e-164 580.5 336 79.5
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.1e-163 580.1 331 79.8
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.1e-163 580.1 325 82.8
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 1.4e-163 579.7 314 83.1
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 1.4e-163 579.7 319 83.7
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.9e-163 579.3 324 81.5
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.9e-163 579.3 322 82.6
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 2.5e-163 578.9 320 83.1
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 4.2e-163 578.2 314 84.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.2e-163 578.2 320 83.8
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 5.5e-163 577.8 320 83.1
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.2e-162 576.6 328 81.1
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.2e-162 576.6 321 82.6
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.2e-162 576.6 310 84.5
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.6e-162 576.2 321 82.6
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.6e-162 576.2 328 81.1
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.6e-162 576.2 319 82.4
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 2.7e-162 575.5 328 80.8
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.7e-162 575.5 311 83.9
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 2.7e-162 575.5 333 78.7
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 3.6e-162 575.1 322 82.3
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.6e-162 575.1 322 82.3
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.6e-162 575.1 322 82.3
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 3.6e-162 575.1 313 84.0
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 4.6e-162 574.7 319 81.8
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 4.6e-162 574.7 319 81.2
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 4.6e-162 574.7 320 82.5
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 4.6e-162 574.7 320 82.8
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 6.1e-162 574.3 325 82.5
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 6.1e-162 574.3 319 81.2
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 6.1e-162 574.3 328 80.2
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 7.9e-162 573.9 322 81.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 7.9e-162 573.9 319 81.2
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.0e-161 573.5 330 80.3
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.0e-161 573.5 320 82.2
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.4e-161 573.2 327 81.0
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 1.4e-161 573.2 315 81.6
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.4e-161 573.2 318 81.8
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.4e-161 573.2 322 81.7
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 2.3e-161 572.4 332 80.7
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 2.3e-161 572.4 331 80.4
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 3.0e-161 572.0 319 82.1
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 3.9e-161 571.6 330 80.9
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 5.1e-161 571.2 317 82.6
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 2.6e-160 568.9 319 83.7
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 5.7e-160 567.8 335 78.5
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.3e-159 566.6 316 81.3
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.3e-159 566.6 331 80.4
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.3e-159 566.6 327 79.8
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 2.2e-159 565.8 324 79.3
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 2.2e-159 565.8 324 79.3
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.2e-159 565.8 322 81.1
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.7e-159 565.1 333 78.7
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 3.7e-159 565.1 333 78.7
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.4e-158 563.1 338 76.9
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.4e-158 563.1 322 81.4
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.8e-158 562.8 328 81.4
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 2.4e-158 562.4 317 80.1
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.1e-158 562.0 320 80.6
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 4.1e-158 561.6 318 81.4
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 4.1e-158 561.6 320 79.4
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 5.3e-158 561.2 338 76.6
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 6.9e-158 560.8 312 82.7
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.9e-158 560.8 331 78.5
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.2e-157 560.1 318 80.5
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 1.2e-157 560.1 340 77.1
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.5e-157 559.7 319 79.3
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.6e-157 558.9 338 76.3
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.6e-157 558.9 338 76.3
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 2.9e-156 555.4 300 84.7
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 8.5e-156 553.9 377 70.0
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.5e-155 552.4 318 79.9
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 2.1e-154 549.3 318 79.9
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 2.7e-154 548.9 333 76.6
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 7.9e-154 547.4 317 80.8
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 1.8e-153 546.2 345 74.8
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.1e-152 543.5 317 78.5
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.3e-151 540.0 316 78.5
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 2.8e-151 538.9 326 76.7
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 8.2e-151 537.3 326 76.4
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 1.8e-150 536.2 318 77.7
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.2e-149 533.5 325 75.4
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 8.8e-145 517.3 305 77.7
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.2e-144 516.9 308 75.6
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 2.4e-142 509.2 309 74.4
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 9.1e-142 507.3 332 71.7
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 3.8e-140 501.9 280 81.1
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 3.2e-139 498.8 308 73.7
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.7e-138 495.7 315 75.2
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 5.7e-136 488.0 320 69.1
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 9.8e-136 487.3 264 83.7
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 7.0e-134 481.1 282 79.1
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.2e-130 470.3 313 69.0
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.2e-130 470.3 313 69.0
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 3.4e-128 462.2 337 66.2
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 3.7e-127 458.8 308 66.6
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.4e-126 456.8 305 67.9
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 2.3e-124 449.5 251 80.5
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.6e-114 415.6 229 84.3
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.0e-113 414.1 307 59.6
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 8.3e-103 377.9 250 68.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 4.6e-101 372.1 308 57.5
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 8.4e-95 351.3 215 74.9
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 2.0e-88 330.1 315 51.7
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 2.4e-81 306.6 345 44.9
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 1.1e-75 287.7 365 41.9
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.9e-54 217.2 123 75.6
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 6.5e-31 139.0 82 79.3
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 8.0e-29 132.1 89 71.9
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.5e-22 109.4 84 67.9
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.5e-19 101.3 68 72.1
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 1.0e-12 78.6 52 67.3
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 1.8e-12 77.8 47 70.2
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 2.3e-12 77.4 52 67.3
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.5e-11 74.7 44 72.7
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 8.6e-07 58.9 49 55.1


User provided reference genes

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