Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 6.0e-103 377.5 185 100.0
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.7e-81 306.2 167 92.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.5e-61 239.2 167 68.3
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 5.6e-61 238.0 167 68.3
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 1.6e-60 236.5 167 67.7
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.8e-59 233.0 167 65.9
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.0e-59 231.9 167 67.1
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 2.9e-57 225.7 170 63.5
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.1e-56 223.8 170 63.5
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.2e-56 221.9 164 62.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 3.5e-55 218.8 170 61.8
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.6e-55 218.4 170 61.8
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.6e-55 218.4 170 61.8
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 4.6e-55 218.4 164 63.4
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 6.0e-55 218.0 164 61.0
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 7.9e-55 217.6 170 61.8
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.0e-54 217.2 170 60.0
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.0e-54 217.2 170 61.2
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.3e-54 216.1 164 61.0
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.3e-54 216.1 170 61.2
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 2.3e-54 216.1 170 61.2
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.0e-54 215.7 170 60.6
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 3.0e-54 215.7 164 60.4
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 5.1e-54 214.9 169 59.8
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.1e-53 213.8 174 59.8
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.1e-53 213.8 164 59.8
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.1e-53 213.8 184 57.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.5e-53 213.4 174 59.8
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.9e-53 213.0 170 59.4
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.7e-53 211.5 164 60.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.3e-52 210.3 170 61.8
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.3e-52 210.3 164 61.0
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.6e-52 209.9 164 62.2
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 1.6e-52 209.9 170 57.6
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.1e-52 209.5 170 58.8
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 3.7e-52 208.8 164 58.5
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.7e-52 208.8 164 57.9
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 6.3e-52 208.0 164 59.8
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 6.3e-52 208.0 164 59.1
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.1e-51 207.2 164 59.8
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.1e-51 205.7 167 59.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 3.1e-51 205.7 170 60.6
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.1e-51 205.7 167 58.7
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.3e-51 204.9 170 57.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 5.3e-51 204.9 164 58.5
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 5.3e-51 204.9 167 58.7
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 6.9e-51 204.5 164 59.8
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 6.9e-51 204.5 167 58.1
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.9e-51 204.5 164 59.1
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 6.9e-51 204.5 164 59.8
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.2e-50 203.8 164 59.1
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.2e-50 203.8 164 59.8
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.2e-50 203.8 189 53.4
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.5e-50 203.4 164 58.5
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.5e-50 203.4 164 58.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.0e-50 203.0 170 57.1
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.6e-50 202.6 164 59.1
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.6e-50 202.6 164 59.8
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.6e-50 202.6 164 59.8
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 3.4e-50 202.2 164 58.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.4e-50 202.2 164 59.1
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 4.5e-50 201.8 164 58.5
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 5.9e-50 201.4 165 59.4
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 7.6e-50 201.1 164 57.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.0e-49 200.7 170 53.5
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.0e-49 200.7 164 58.5
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.3e-49 200.3 164 57.3
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.3e-49 200.3 160 60.6
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 1.7e-49 199.9 164 58.5
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.7e-49 199.9 164 58.5
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.7e-49 199.9 164 58.5
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.2e-49 199.5 170 55.3
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.9e-49 199.1 164 59.1
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 2.9e-49 199.1 148 63.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.1e-48 197.2 164 57.3
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.4e-48 196.8 164 57.3
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 5.5e-48 194.9 164 56.1
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 9.3e-48 194.1 164 57.3
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.2e-47 193.7 164 57.3
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.6e-47 193.4 164 55.5
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.6e-47 193.4 164 54.9
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.6e-47 193.4 164 54.9
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 1.6e-47 193.4 192 52.1
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 2.1e-47 193.0 164 55.5
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 3.6e-47 192.2 210 47.6
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.1e-47 191.4 164 54.3
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 7.9e-47 191.0 164 53.7
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 7.9e-47 191.0 171 56.1
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.8e-46 189.9 164 54.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.3e-46 189.5 125 69.6
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 3.9e-46 188.7 164 56.1
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 3.9e-46 188.7 178 52.8
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 5.1e-46 188.3 170 53.5
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 8.7e-46 187.6 202 46.5
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.3e-45 185.7 170 52.9
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 9.1e-43 177.6 155 61.3
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 3.4e-42 175.6 164 55.5
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 5.9e-42 174.9 139 59.7
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 2.2e-41 172.9 127 62.2
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 3.8e-41 172.2 123 65.9
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 5.0e-41 171.8 153 57.5
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 2.5e-40 169.5 123 61.8
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 5.5e-40 168.3 146 56.2
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.1e-39 166.4 170 51.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 7.9e-39 164.5 158 53.2
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.1e-37 160.6 158 50.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.5e-37 160.2 158 53.2
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.8e-36 156.0 152 52.6
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.5e-34 150.2 152 50.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.3e-28 130.6 164 41.5
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.4e-27 126.3 91 63.7
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 7.7e-26 121.3 172 39.5
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.1e-23 113.2 170 37.6
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.0e-22 109.4 170 39.4
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.4e-19 99.8 164 36.6
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.9e-17 92.8 100 49.0
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 8.5e-17 91.3 188 30.9
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 4.2e-16 89.0 79 55.7
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.3e-09 67.4 47 63.8


User provided reference genes

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