Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00915 Aquilegia oxysepala HOM05D000054 ORTHO05D015321 3.2e-63 245.0 128 100.0
Potri.003G025632 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.8e-13 79.7 93 49.5
Potri.001G385300 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.0e-13 78.6 84 53.6
Potri.003G026325 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.0e-13 78.6 93 49.5
Ca_27212_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 5.2e-13 78.2 103 42.7
TAR624G0357 Trochodendron aralioides HOM05D000054 ORTHO05D000171 6.8e-13 77.8 110 44.5
Potri.001G385400 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-12 76.6 93 48.4
Potri.001G385600 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-12 76.6 93 48.4
Potri.001G385900 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-12 76.6 93 48.4
Potri.001G386300 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-12 76.6 80 53.8
Potri.003G025800 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.5e-12 76.6 93 48.4
CSS0033063 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.6e-12 75.9 114 40.4
Sabra16G0254200 Salix brachista HOM05D000054 ORTHO05D000171 2.6e-12 75.9 93 48.4
GSVIVG01014150001 Vitis vinifera HOM05D000054 ORTHO05D000171 2.6e-12 75.9 108 43.5
Dinv13369 Davidia involucrata HOM05D000054 ORTHO05D000171 3.4e-12 75.5 88 46.6
Glyma.12G155900 Glycine max HOM05D000054 ORTHO05D000171 3.4e-12 75.5 80 52.5
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 3.4e-12 75.5 91 47.3
TAR624G0629 Trochodendron aralioides HOM05D000054 ORTHO05D000171 3.4e-12 75.5 103 44.7
PSO528G0130 Papaver somniferum HOM05D000054 ORTHO05D000171 5.7e-12 74.7 102 49.0
GSVIVG01014134001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.7e-12 74.7 108 42.6
Glyma.06G226700 Glycine max HOM05D000054 ORTHO05D000171 9.8e-12 73.9 80 51.2
Sabra16G0252200 Salix brachista HOM05D000054 ORTHO05D000171 9.8e-12 73.9 114 38.6
Atru.chr2.2019 Acer truncatum HOM05D000054 ORTHO05D000171 1.7e-11 73.2 96 44.8
Aqoxy4G00212 Aquilegia oxysepala HOM05D000054 ORTHO05D000171 1.7e-11 73.2 83 54.2
EL10Ac4g08404 Beta vulgaris HOM05D000054 ORTHO05D000171 1.7e-11 73.2 93 45.2
PGSC0003DMG400028617 Solanum tuberosum HOM05D000054 ORTHO05D000171 1.7e-11 73.2 84 46.4
CAN.G292.12 Capsicum annuum HOM05D000054 ORTHO05D000171 2.2e-11 72.8 100 43.0
Lj1A826T68 Lonicera japonica HOM05D000054 ORTHO05D000171 2.2e-11 72.8 98 42.9
PSO170G1676 Papaver somniferum HOM05D000054 ORTHO05D000171 2.2e-11 72.8 83 55.4
Potri.011G106400 Populus trichocarpa HOM05D000054 ORTHO05D000171 2.2e-11 72.8 93 46.2
Duzib213G0607 Durio zibethinus HOM05D000054 ORTHO05D000171 3.7e-11 72.0 87 48.3
Eucgr.F01305 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.7e-11 72.0 84 50.0
Dinv15014 Davidia involucrata HOM05D000054 ORTHO05D000171 4.8e-11 71.6 108 38.9
Eucgr.F01302 Eucalyptus grandis HOM05D000054 ORTHO05D000171 4.8e-11 71.6 84 50.0
Eucgr.F04177 Eucalyptus grandis HOM05D000054 ORTHO05D000171 4.8e-11 71.6 84 51.2
Phvul.011G167800 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 4.8e-11 71.6 80 51.2
Sabra16G0252100 Salix brachista HOM05D000054 ORTHO05D000171 4.8e-11 71.6 114 37.7
AUR62039598 Chenopodium quinoa HOM05D000054 ORTHO05D000171 8.3e-11 70.9 83 48.2
Ca_03938_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 8.3e-11 70.9 90 47.8
Peaxi162Scf00000g00708 Petunia axillaris HOM05D000054 ORTHO05D000171 8.3e-11 70.9 82 51.2
CiPaw.11G158000 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.1e-10 70.5 84 46.4
Nn6g34393 Nelumbo nucifera HOM05D000054 ORTHO05D005077 1.1e-10 70.5 98 44.9
Nn6g34449 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.1e-10 70.5 98 44.9
RcHm_v2.0_Chr5g0029981 Rosa chinensis HOM05D000054 ORTHO05D000171 1.1e-10 70.5 84 48.8
TAR624G0477 Trochodendron aralioides HOM05D000054 ORTHO05D000171 1.1e-10 70.5 103 42.7
ECA234G0716 Erigeron canadensis HOM05D000054 ORTHO05D000171 1.4e-10 70.1 88 48.9
Gohir.D01G039500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.4e-10 70.1 82 48.8
Gorai.002G049000 Gossypium raimondii HOM05D000054 ORTHO05D000171 1.4e-10 70.1 82 48.8
Manes.03G091900 Manihot esculenta HOM05D000054 ORTHO05D000171 1.4e-10 70.1 103 40.8
PGR083G0101 Punica granatum HOM05D000054 ORTHO05D000171 1.4e-10 70.1 89 49.4
PGR083G0379 Punica granatum HOM05D000054 ORTHO05D000171 1.4e-10 70.1 89 49.4
RcHm_v2.0_Chr5g0029911 Rosa chinensis HOM05D000054 ORTHO05D000171 1.4e-10 70.1 84 48.8
Gohir.A04G044400 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.8e-10 69.7 87 46.0
HanXRQChr10g0305541 Helianthus annuus HOM05D000054 ORTHO05D000171 1.8e-10 69.7 88 51.1
Hma1.2p1_0050F.1_g028940 Hydrangea macrophylla HOM05D000054 ORTHO05D000171 1.8e-10 69.7 79 50.6
Sabra16G0253800 Salix brachista HOM05D000054 ORTHO05D000171 1.8e-10 69.7 114 37.7
SalBow8G2370 Salvia bowleyana HOM05D000054 ORTHO05D000171 1.8e-10 69.7 87 47.1
PGSC0003DMG400015391 Solanum tuberosum HOM05D000054 ORTHO05D000171 1.8e-10 69.7 88 45.5
CANSAT56G1606 Cannabis sativa HOM05D000054 ORTHO05D000171 2.4e-10 69.3 84 51.2
CDE10G0561 Ceratophyllum demersum HOM05D000054 ORTHO05D000171 2.4e-10 69.3 111 42.3
AUR62019625 Chenopodium quinoa HOM05D000054 ORTHO05D000171 2.4e-10 69.3 83 49.4
Eucgr.F01306 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.4e-10 69.3 84 48.8
Nn3g21042 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.4e-10 69.3 85 48.2
Rhsim04G0035500 Rhododendron simsii HOM05D000054 ORTHO05D000171 2.4e-10 69.3 88 48.9
Haze_09272 Corylus avellana HOM05D000054 ORTHO05D000171 3.1e-10 68.9 103 39.8
Glyma.13G266300 Glycine max HOM05D000054 ORTHO05D000171 3.1e-10 68.9 80 48.8
Gohir.A01G048900 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.1e-10 68.9 82 50.0
Nitab4.5_0003166g0030 Nicotiana tabacum HOM05D000054 ORTHO05D000171 3.1e-10 68.9 84 45.2
Prupe.4G158000 Prunus persica HOM05D000054 ORTHO05D000171 3.1e-10 68.9 84 48.8
Nitab4.5_0000035g0400 Nicotiana tabacum HOM05D000054 ORTHO05D000171 4.1e-10 68.6 84 45.2
Atru.chr2.2026 Acer truncatum HOM05D000054 ORTHO05D005077 5.4e-10 68.2 93 44.1
Dinv15010 Davidia involucrata HOM05D000054 ORTHO05D005077 5.4e-10 68.2 93 40.9
FvH4_3g17940 Fragaria vesca HOM05D000054 ORTHO05D000171 5.4e-10 68.2 84 48.8
FAN11G3500 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.4e-10 68.2 84 48.8
Medtr2g075250 Medicago truncatula HOM05D000054 ORTHO05D000171 5.4e-10 68.2 88 48.9
Medtr8g058250 Medicago truncatula HOM05D000054 ORTHO05D000171 5.4e-10 68.2 102 41.2
CiPaw.11G157900 Carya illinoinensis HOM05D000054 ORTHO05D000171 7.0e-10 67.8 84 46.4
CsaV3_4G032890 Cucumis sativus L. HOM05D000054 ORTHO05D000171 7.0e-10 67.8 90 43.3
PGSC0003DMG400013199 Solanum tuberosum HOM05D000054 ORTHO05D000171 7.0e-10 67.8 89 47.2
VMungo1127G2210 Vigna mungo HOM05D000054 ORTHO05D000171 7.0e-10 67.8 91 46.2
Gohir.D05G338700 Gossypium hirsutum HOM05D000054 ORTHO05D000171 9.1e-10 67.4 87 44.8
Gorai.009G363600 Gossypium raimondii HOM05D000054 ORTHO05D000171 9.1e-10 67.4 87 44.8
TAR626G1348 Trochodendron aralioides HOM05D000054 ORTHO05D000171 9.1e-10 67.4 72 51.4
vmacro09404 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 9.1e-10 67.4 94 45.7
vmacro09409 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 9.1e-10 67.4 85 45.9
Haze_13412 Corylus avellana HOM05D000054 ORTHO05D000171 1.2e-09 67.0 103 39.8
MELO3C025664.2 Cucumis melo HOM05D000054 ORTHO05D000171 1.2e-09 67.0 90 43.3
FAN16G1129 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.2e-09 67.0 84 48.8
Nn3g21040 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.2e-09 67.0 105 41.9
Rhsim04G0036300 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.2e-09 67.0 88 47.7
ClCG07G010050 Citrullus lanatus HOM05D000054 ORTHO05D000171 1.6e-09 66.6 87 44.8
Ciclev10018721m.g Citrus clementina HOM05D000054 ORTHO05D000171 1.6e-09 66.6 93 41.9
Eucgr.L02548 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.6e-09 66.6 77 49.4
Glyma.12G231800 Glycine max HOM05D000054 ORTHO05D000171 1.6e-09 66.6 80 46.2
Sc07g0002500 Simmondsia chinensis HOM05D000054 ORTHO05D000171 1.6e-09 66.6 84 46.4
Solyc12g014350.3 Solanum lycopersicum HOM05D000054 ORTHO05D000171 1.6e-09 66.6 76 47.4
Sopen12g006120 Solanum pennellii HOM05D000054 ORTHO05D000171 1.6e-09 66.6 76 47.4
Thecc.07G129100 Theobroma cacao HOM05D000054 ORTHO05D000171 1.6e-09 66.6 87 46.0
MELO3C016108.2 Cucumis melo HOM05D000054 ORTHO05D000171 2.0e-09 66.2 83 47.0
Migut.M00701 Erythranthe guttata HOM05D000054 ORTHO05D000171 2.0e-09 66.2 76 50.0
FAN21G0678 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.0e-09 66.2 84 47.6
Glyma.12G233000 Glycine max HOM05D000054 ORTHO05D000171 2.0e-09 66.2 80 47.5
Lj3g0004211 Lotus japonicus HOM05D000054 ORTHO05D000171 2.0e-09 66.2 88 46.6
Nn3g21041 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.0e-09 66.2 97 42.3
Sed0016500 Sechium edule HOM05D000054 ORTHO05D000171 2.0e-09 66.2 84 44.0
Hund10455 Selenicereus undatus HOM05D000054 ORTHO05D000171 2.0e-09 66.2 84 45.2
ECA236G0246 Erigeron canadensis HOM05D000054 ORTHO05D000171 2.7e-09 65.9 72 50.0
SGA_v2.0_scaffold73G24392 Striga asiatica HOM05D000054 ORTHO05D000171 2.7e-09 65.9 84 46.4
vmacro09410 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 2.7e-09 65.9 100 42.0
Ah.04g164070 Amaranthus hybridus HOM05D000054 ORTHO05D000171 3.5e-09 65.5 83 43.4
arahy.Tifrunner.gnm1.ann1.R7UPJF Arachis hypogaea HOM05D000054 ORTHO05D000171 3.5e-09 65.5 80 46.2
CiPaw.11G158100 Carya illinoinensis HOM05D000054 ORTHO05D000171 3.5e-09 65.5 84 45.2
COL.COLO4_17487 Corchorus olitorius HOM05D000054 ORTHO05D000171 3.5e-09 65.5 103 39.8
CsaV3_4G008280 Cucumis sativus L. HOM05D000054 ORTHO05D000171 3.5e-09 65.5 82 46.3
Nn6g34454 Nelumbo nucifera HOM05D000054 ORTHO05D000171 3.5e-09 65.5 88 45.5
QL10p027809 Quercus lobata HOM05D000054 ORTHO05D000171 3.5e-09 65.5 80 46.2
Nn3g21046 Nelumbo nucifera HOM05D000054 ORTHO05D000171 4.5e-09 65.1 101 41.6
Actinidia12597 Actinidia chinensis HOM05D000054 ORTHO05D000171 7.7e-09 64.3 113 38.1
CiPaw.11G157800 Carya illinoinensis HOM05D000054 ORTHO05D000171 7.7e-09 64.3 84 44.0
Lsat_1_v5_gn_5_125941 Lactuca sativa HOM05D000054 ORTHO05D000171 7.7e-09 64.3 84 45.2
QL08p025818 Quercus lobata HOM05D000054 ORTHO05D000171 7.7e-09 64.3 80 46.2
CiPaw.12G111500 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.0e-08 63.9 87 46.0
Eucgr.F04179 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.0e-08 63.9 89 43.8
THA.LOC104822575 Tarenaya hassleriana HOM05D000054 ORTHO05D000171 1.0e-08 63.9 104 40.4
CiPaw.11G157700 Carya illinoinensis HOM05D000054 ORTHO05D000171 1.3e-08 63.5 84 46.4
Oeu058463.2 Olea europaea HOM05D000054 ORTHO05D000171 1.3e-08 63.5 93 43.0
Psat4g140440 Pisum sativum HOM05D000054 ORTHO05D000171 1.3e-08 63.5 80 45.0
Rhsim06G0211100 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.3e-08 63.5 75 46.7
GSVIVG01014147001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.3e-08 63.5 80 45.0
arahy.Tifrunner.gnm1.ann1.SPKK1S Arachis hypogaea HOM05D000054 ORTHO05D000171 1.7e-08 63.2 80 45.0
Psat0s1728g0240 Pisum sativum HOM05D000054 ORTHO05D000171 1.7e-08 63.2 86 44.2
SalBow8G1032 Salvia bowleyana HOM05D000054 ORTHO05D000171 1.7e-08 63.2 84 45.2
TPR.G13171 Trifolium pratense HOM05D000054 ORTHO05D000171 1.7e-08 63.2 80 47.5
VMungo1080G0262 Vigna mungo HOM05D000054 ORTHO05D000171 1.7e-08 63.2 81 46.9
AUR62019624 Chenopodium quinoa HOM05D000054 ORTHO05D000171 2.9e-08 62.4 91 40.7
Cc05_g10840 Coffea canephora HOM05D000054 ORTHO05D000171 2.9e-08 62.4 67 46.3
Phvul.005G079100 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 2.9e-08 62.4 81 46.9
Eucgr.F01301 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.8e-08 62.0 84 44.0
Lsat_1_v5_gn_7_102080 Lactuca sativa HOM05D000054 ORTHO05D000171 3.8e-08 62.0 79 45.6
QL02p081039 Quercus lobata HOM05D000054 ORTHO05D000171 3.8e-08 62.0 80 43.8
QL10p027704 Quercus lobata HOM05D000054 ORTHO05D000171 3.8e-08 62.0 80 43.8
Lsat_1_v5_gn_7_102060 Lactuca sativa HOM05D000054 ORTHO05D000171 5.0e-08 61.6 79 49.4
Lalb_Chr03g0031261 Lupinus albus HOM05D000054 ORTHO05D000171 5.0e-08 61.6 83 43.4
GSVIVG01014145001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.0e-08 61.6 80 43.8
Eucgr.B00972 Eucalyptus grandis HOM05D000054 ORTHO05D000171 6.5e-08 61.2 90 41.1
Eucgr.B00978 Eucalyptus grandis HOM05D000054 ORTHO05D000171 6.5e-08 61.2 84 42.9
Eucgr.B00963 Eucalyptus grandis HOM05D000054 ORTHO05D000171 8.5e-08 60.8 84 42.9
MBI06_g10741_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 8.5e-08 60.8 103 40.8
MD11G1267500 Malus domestica HOM05D000054 ORTHO05D000171 8.5e-08 60.8 84 46.4
ATR0077G001 Amborella trichopoda HOM05D000054 ORTHO05D005077 1.1e-07 60.5 84 47.6
Lalb_Chr19g0133741 Lupinus albus HOM05D000054 ORTHO05D000171 1.1e-07 60.5 94 40.4
Oeu010024.1 Olea europaea HOM05D000054 ORTHO05D015321 1.1e-07 60.5 98 35.7
Sc03g0010680 Simmondsia chinensis HOM05D000054 ORTHO05D000171 1.1e-07 60.5 85 44.7
GSVIVG01014138001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.1e-07 60.5 80 42.5
Sed0015607 Sechium edule HOM05D000054 ORTHO05D000171 1.5e-07 60.1 90 38.9
GSVIVG01014140001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.5e-07 60.1 80 42.5
MBI06_g10743_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 1.9e-07 59.7 66 51.5
Nn6g34455 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.9e-07 59.7 100 41.0
TPR.G29059 Trifolium pratense HOM05D000054 ORTHO05D000171 1.9e-07 59.7 72 45.8
vmacro11963 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 1.9e-07 59.7 89 42.7
Eucgr.B00894 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.5e-07 59.3 84 42.9
TWI38G2264 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 2.5e-07 59.3 80 45.0
ATR0213G012 Amborella trichopoda HOM05D000054 ORTHO05D000171 4.2e-07 58.5 83 48.2
GSVIVG01014149001 Vitis vinifera HOM05D000054 ORTHO05D000171 4.2e-07 58.5 80 42.5
CARHR043660 Cardamine hirsuta HOM05D000054 ORTHO05D000171 5.5e-07 58.2 99 37.4
HanXRQChr15g0495111 Helianthus annuus HOM05D000054 ORTHO05D000171 5.5e-07 58.2 93 38.7
Sed0000305 Sechium edule HOM05D000054 ORTHO05D000171 7.2e-07 57.8 71 43.7
Sed0011099 Sechium edule HOM05D000054 ORTHO05D000171 7.2e-07 57.8 78 42.3
EL10Ac4g08400 Beta vulgaris HOM05D000054 ORTHO05D000171 9.4e-07 57.4 103 32.0
HanXRQChr13g0412091 Helianthus annuus HOM05D000054 ORTHO05D000171 9.4e-07 57.4 73 45.2
Sc03g0010650 Simmondsia chinensis HOM05D000054 ORTHO05D000171 1.2e-06 57.0 93 35.5
Aa31LG10G1750 Aethionema arabicum HOM05D000054 ORTHO05D000171 1.6e-06 56.6 95 38.9
ATR0452G001 Amborella trichopoda HOM05D000054 ORTHO05D005077 1.6e-06 56.6 84 46.4
AT1G53430 Arabidopsis thaliana HOM05D000054 ORTHO05D000171 2.1e-06 56.2 78 41.0
AL1G61940 Arabidopsis lyrata HOM05D000054 ORTHO05D000171 2.7e-06 55.8 80 40.0
Sed0015874 Sechium edule HOM05D000054 ORTHO05D000171 2.7e-06 55.8 86 39.5
PSO782G2413 Papaver somniferum HOM05D000054 ORTHO05D000171 3.6e-06 55.5 93 40.9
Thecc.07G129200 Theobroma cacao HOM05D000054 ORTHO05D000171 4.7e-06 55.1 85 38.8
AUR62039600 Chenopodium quinoa HOM05D000054 ORTHO05D000171 6.1e-06 54.7 55 52.7
HanXRQChr13g0412141 Helianthus annuus HOM05D000054 ORTHO05D000171 6.1e-06 54.7 79 45.6
PSO528G0057 Papaver somniferum HOM05D000054 ORTHO05D000171 6.1e-06 54.7 93 40.9
HanXRQChr16g0518961 Helianthus annuus HOM05D000054 ORTHO05D005077 8.0e-06 54.3 77 41.6
PSO170G6227 Papaver somniferum HOM05D000054 ORTHO05D000171 8.0e-06 54.3 62 50.0


User provided reference genes

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