Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00899 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 1.2e-172 610.1 414 100.0
Aqoxy7G01324 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 1.9e-77 293.9 244 60.2
Aqoxy2G02642 Aquilegia oxysepala HOM05D003900 ORTHO05D016547 3.7e-36 156.8 210 41.4
Aqoxy7G03291 Aquilegia oxysepala HOM05D003900 ORTHO05D016547 1.2e-34 151.8 141 56.0
Aqoxy4G01268 Aquilegia oxysepala HOM05D003900 ORTHO05D016547 6.5e-33 146.0 218 43.6
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 2.5e-24 117.5 182 37.9
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 2.2e-20 104.4 180 35.6
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 4.9e-20 103.2 219 33.3
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 4.9e-20 103.2 180 38.9
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 1.4e-19 101.7 180 38.9
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 2.4e-19 100.9 180 37.2
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 3.1e-19 100.5 179 39.7
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 4.1e-19 100.1 182 35.2
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 4.1e-19 100.1 182 35.2
Medtr8g098755 Medicago truncatula HOM05D003900 ORTHO05D005009 7.0e-19 99.4 184 37.5
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 7.0e-19 99.4 179 39.1
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 9.2e-19 99.0 237 30.4
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 9.2e-19 99.0 179 35.2
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 1.2e-18 98.6 176 36.9
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 1.2e-18 98.6 182 34.6
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 1.6e-18 98.2 179 36.9
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 3.5e-18 97.1 184 34.8
Psat7g005640 Pisum sativum HOM05D003900 ORTHO05D005009 5.9e-18 96.3 180 35.0
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 5.9e-18 96.3 180 35.0
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 7.8e-18 95.9 184 34.2
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 1.3e-17 95.1 180 37.2
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 1.3e-17 95.1 180 35.0
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 1.7e-17 94.7 181 34.3
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 2.9e-17 94.0 180 36.1
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 6.6e-17 92.8 180 34.4
ECA236G1505 Erigeron canadensis HOM05D003900 ORTHO05D005009 1.1e-16 92.0 180 34.4
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 1.1e-16 92.0 180 33.9
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 1.9e-16 91.3 179 34.6
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 1.9e-16 91.3 179 34.1
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 2.5e-16 90.9 185 32.4
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 7.3e-16 89.4 177 34.5
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 9.5e-16 89.0 181 32.6
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 1.6e-15 88.2 180 33.3
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 1.6e-15 88.2 180 30.6
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 2.1e-15 87.8 176 36.4
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 2.1e-15 87.8 180 33.3
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.8e-15 87.4 179 31.8
MBI11_g19575_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 2.8e-15 87.4 219 32.0
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 4.7e-15 86.7 179 30.7
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 1.0e-14 85.5 185 30.8
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea HOM05D003900 ORTHO05D005009 1.4e-14 85.1 178 32.0
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 1.8e-14 84.7 181 33.7
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.0e-14 84.0 183 31.7
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 3.0e-14 84.0 179 31.3
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 3.0e-14 84.0 180 28.9
CiPaw.01G067200 Carya illinoinensis HOM05D003900 ORTHO05D005009 4.0e-14 83.6 179 31.8
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 4.0e-14 83.6 178 32.0
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.2e-14 83.2 183 31.7
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 5.2e-14 83.2 180 33.3
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 6.8e-14 82.8 181 32.6
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 8.9e-14 82.4 181 32.0
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 8.9e-14 82.4 178 31.5
Glyma.16G031800 Glycine max HOM05D003900 ORTHO05D005009 1.5e-13 81.6 177 31.1
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 1.5e-13 81.6 179 32.4
THA.LOC104817316 Tarenaya hassleriana HOM05D003900 ORTHO05D005009 2.0e-13 81.3 184 31.5
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 2.6e-13 80.9 240 26.7
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 2.6e-13 80.9 175 31.4
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 2.6e-13 80.9 181 33.1
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.4e-13 80.5 179 31.3
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 4.4e-13 80.1 184 30.4
Sp4g28170 Schrenkiella parvula HOM05D003900 ORTHO05D005009 4.4e-13 80.1 182 30.8
HPP92_011504 Vanilla planifolia HOM05D003900 ORTHO05D005009 4.4e-13 80.1 234 28.2
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 5.7e-13 79.7 179 33.0
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 7.5e-13 79.3 181 30.9
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 9.8e-13 79.0 177 33.9
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 1.3e-12 78.6 178 32.6
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 1.3e-12 78.6 176 33.5
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 1.3e-12 78.6 182 30.8
Aa31LG1G27520 Aethionema arabicum HOM05D003900 ORTHO05D005009 1.7e-12 78.2 179 31.8
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 1.7e-12 78.2 179 31.8
RcHm_v2.0_Chr5g0017031 Rosa chinensis HOM05D003900 ORTHO05D005009 1.7e-12 78.2 144 34.0
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 2.2e-12 77.8 175 32.6
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 2.9e-12 77.4 184 33.2
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 2.9e-12 77.4 174 30.5
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 2.9e-12 77.4 179 31.8
PSO384G0446 Papaver somniferum HOM05D003900 ORTHO05D005009 2.9e-12 77.4 184 25.5
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea HOM05D003900 ORTHO05D005009 3.7e-12 77.0 178 30.3
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.7e-12 77.0 180 29.4
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.7e-12 77.0 180 29.4
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 3.7e-12 77.0 191 30.4
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 4.9e-12 76.6 182 25.8
ATR0721G158 Amborella trichopoda HOM05D003900 ORTHO05D005009 6.4e-12 76.3 202 29.2
EL10Ac1g00355 Beta vulgaris HOM05D003900 ORTHO05D005009 6.4e-12 76.3 181 30.9
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 8.3e-12 75.9 183 33.9
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 8.3e-12 75.9 183 33.9
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 8.3e-12 75.9 179 30.7
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 1.1e-11 75.5 184 33.2
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 1.1e-11 75.5 184 33.2
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.1e-11 75.5 180 28.9
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 1.4e-11 75.1 178 30.3
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 1.4e-11 75.1 176 33.5
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 1.8e-11 74.7 183 32.2
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 1.8e-11 74.7 184 33.2
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 1.8e-11 74.7 184 32.6
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 1.8e-11 74.7 184 32.6
MELO3C029134.2 Cucumis melo HOM05D003900 ORTHO05D005009 3.2e-11 73.9 181 29.8
Thhalv10022571m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 3.2e-11 73.9 177 33.9
Duzib133G1046 Durio zibethinus HOM05D003900 ORTHO05D005009 4.1e-11 73.6 179 27.9
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 5.4e-11 73.2 184 33.2
FAN10G1060 Fragaria x ananassa HOM05D003900 ORTHO05D005009 5.4e-11 73.2 174 31.0
FvH4_5g03011 Fragaria vesca HOM05D003900 ORTHO05D005009 7.0e-11 72.8 118 32.2
Thhalv10001319m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 9.2e-11 72.4 179 32.4
DCAR_025213 Daucus carota HOM05D003900 ORTHO05D005009 1.2e-10 72.0 232 28.9
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 3.5e-10 70.5 183 32.2
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 3.5e-10 70.5 182 28.0
AUR62004412 Chenopodium quinoa HOM05D003900 ORTHO05D005009 7.8e-10 69.3 185 29.2
Eucgr.E00097 Eucalyptus grandis HOM05D003900 ORTHO05D005009 1.7e-09 68.2 174 30.5
Aqoxy7G01955 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 1.1e-08 65.5 75 46.7
FAN18G4460 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.5e-08 65.1 86 37.2
Medtr3g088810 Medicago truncatula HOM05D003900 ORTHO05D005009 3.3e-08 63.9 91 41.8
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 5.6e-08 63.2 241 27.4
FAN18G1403 Fragaria x ananassa HOM05D003900 ORTHO05D005009 7.3e-08 62.8 94 35.1
RcHm_v2.0_Chr7g0228291 Rosa chinensis HOM05D003900 ORTHO05D005009 9.5e-08 62.4 78 42.3
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 2.1e-07 61.2 248 26.6
Cfa003873 Carpinus fangiana HOM05D003900 ORTHO05D005009 3.6e-07 60.5 199 25.6
AUR62022618 Chenopodium quinoa HOM05D003900 ORTHO05D005009 1.1e-06 58.9 183 28.4
CiPaw.01G197700 Carya illinoinensis HOM05D000424 ORTHO05D000355 8.9e-06 55.8 114 28.9


User provided reference genes

Program Settings