Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00894 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 6.1e-107 391.0 217 100.0
Aqoxy3G04036 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 5.9e-86 321.2 181 98.9
TAR426G0001 Trochodendron aralioides HOM05D004905 ORTHO05D005456 3.1e-50 202.6 196 59.7
Dinv33966 Davidia involucrata HOM05D001288 ORTHO05D005456 6.9e-50 201.4 190 61.6
TAR535G0011 Trochodendron aralioides HOM05D004905 ORTHO05D005456 6.9e-50 201.4 196 59.2
CSS0040498 Camellia sinensis var. sinensis HOM05D004905 ORTHO05D005456 2.3e-45 186.4 181 59.7
Hma1.2p1_0500F.1_g167210 Hydrangea macrophylla HOM05D004905 ORTHO05D005456 8.7e-45 184.5 190 55.8
Nn4g23955 Nelumbo nucifera HOM05D004905 ORTHO05D005456 1.1e-44 184.1 194 55.2
CSS0018291 Camellia sinensis var. sinensis HOM05D004905 ORTHO05D005456 1.5e-44 183.7 196 58.2
CiPaw.03G064700 Carya illinoinensis HOM05D004905 ORTHO05D005456 1.9e-44 183.3 190 57.4
Actinidia15900 Actinidia chinensis HOM05D004905 ORTHO05D005456 2.5e-44 183.0 189 56.1
Eucgr.F02791 Eucalyptus grandis HOM05D004905 ORTHO05D005456 5.6e-44 181.8 204 53.4
Cfa007892 Carpinus fangiana HOM05D004905 ORTHO05D005456 1.3e-43 180.6 202 54.0
Ciclev10011170m.g Citrus clementina HOM05D004905 ORTHO05D005456 1.6e-43 180.3 198 54.5
QL04p012071 Quercus lobata HOM05D004905 ORTHO05D005456 1.6e-43 180.3 202 53.5
QL02p050316 Quercus lobata HOM05D004905 ORTHO05D005456 2.1e-43 179.9 202 53.0
TWI53G1125 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 3.6e-43 179.1 213 54.0
Cpa.g.sc170.31 Carica papaya HOM05D004905 ORTHO05D005456 2.4e-42 176.4 196 54.1
MD09G1256700 Malus domestica HOM05D004905 ORTHO05D005456 2.4e-42 176.4 204 51.0
Haze_14185 Corylus avellana HOM05D004905 ORTHO05D005456 3.1e-42 176.0 194 54.6
Manes.02G071500 Manihot esculenta HOM05D004905 ORTHO05D005456 3.1e-42 176.0 191 55.5
Prupe.3G148500 Prunus persica HOM05D004905 ORTHO05D005456 3.1e-42 176.0 204 51.5
Aqoxy4G01116 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 4.0e-42 175.6 107 91.6
Atru.chr1.1616 Acer truncatum HOM05D004905 ORTHO05D005456 6.9e-42 174.9 196 54.6
PGR004G1909 Punica granatum HOM05D004905 ORTHO05D005456 6.9e-42 174.9 188 56.4
Lalb_Chr10g0091451 Lupinus albus HOM05D004905 ORTHO05D005456 1.5e-41 173.7 227 48.0
Glyma.18G294100 Glycine max HOM05D004905 ORTHO05D005456 4.5e-41 172.2 229 47.2
CANSAT11G1581 Cannabis sativa HOM05D004905 ORTHO05D005456 1.3e-40 170.6 220 46.8
Oeu030795.1 Olea europaea HOM05D004905 ORTHO05D005456 1.7e-40 170.2 181 54.1
FvH4_1g25551 Fragaria vesca HOM05D004905 ORTHO05D005456 2.9e-40 169.5 206 50.5
FAN26G1687 Fragaria x ananassa HOM05D004905 ORTHO05D005456 2.9e-40 169.5 206 51.0
Migut.H00239 Erythranthe guttata HOM05D004905 ORTHO05D005456 3.8e-40 169.1 211 48.8
Duzib138G0198 Durio zibethinus HOM05D004905 ORTHO05D005456 8.4e-40 167.9 204 49.0
FAN19G0313 Fragaria x ananassa HOM05D004905 ORTHO05D005456 8.4e-40 167.9 206 50.0
Rhsim10G0072700 Rhododendron simsii HOM05D004905 ORTHO05D005456 8.4e-40 167.9 194 53.1
MSTRG.23594 Avicennia marina HOM05D004905 ORTHO05D005456 1.4e-39 167.2 197 50.3
Potri.017G118900 Populus trichocarpa HOM05D004905 ORTHO05D005456 1.9e-39 166.8 204 50.5
arahy.Tifrunner.gnm1.ann1.00EJBM Arachis hypogaea HOM05D004905 ORTHO05D005456 2.4e-39 166.4 228 49.1
arahy.Tifrunner.gnm1.ann1.VL1078 Arachis hypogaea HOM05D004905 ORTHO05D005456 2.4e-39 166.4 228 49.1
Ca_08091_v3 Cicer arietinum L. HOM05D004905 ORTHO05D005456 2.4e-39 166.4 205 50.2
PSO478G4495 Papaver somniferum HOM05D004905 ORTHO05D005456 2.4e-39 166.4 193 53.4
Thecc.04G128800 Theobroma cacao HOM05D004905 ORTHO05D005456 3.2e-39 166.0 196 52.6
RcHm_v2.0_Chr2g0123711 Rosa chinensis HOM05D004905 ORTHO05D005456 4.2e-39 165.6 205 46.8
TPR.G16546 Trifolium pratense HOM05D004905 ORTHO05D005456 5.5e-39 165.2 204 51.0
FAN28G0686 Fragaria x ananassa HOM05D004905 ORTHO05D005456 7.1e-39 164.9 205 48.8
PSO017G0866 Papaver somniferum HOM05D004905 ORTHO05D005456 7.1e-39 164.9 192 52.1
Glyma.02G089100 Glycine max HOM05D001288 ORTHO05D001123 9.3e-39 164.5 204 51.0
Medtr7g082660 Medicago truncatula HOM05D004905 ORTHO05D005456 1.2e-38 164.1 204 51.5
Sabra17G0098200 Salix brachista HOM05D004905 ORTHO05D005456 1.2e-38 164.1 204 49.0
Nn3g17953 Nelumbo nucifera HOM05D004905 ORTHO05D005456 2.7e-38 162.9 195 49.2
Nitab4.5_0000753g0160 Nicotiana tabacum HOM05D004905 ORTHO05D005456 4.6e-38 162.2 201 47.8
Potri.004G095800 Populus trichocarpa HOM05D004905 ORTHO05D005456 4.6e-38 162.2 203 47.8
Psat3g097720 Pisum sativum HOM05D004905 ORTHO05D005456 7.9e-38 161.4 205 50.7
Lj1g0028143 Lotus japonicus HOM05D004905 ORTHO05D005456 5.1e-37 158.7 205 49.3
DCAR_010704 Daucus carota HOM05D004905 ORTHO05D005456 1.1e-36 157.5 194 49.0
Sed0000790 Sechium edule HOM05D004905 ORTHO05D005456 1.1e-36 157.5 193 49.7
TWI74G1312 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 1.5e-36 157.1 185 53.0
VMungo1383G0301 Vigna mungo HOM05D004905 ORTHO05D005456 2.5e-36 156.4 204 49.5
ATR0681G096 Amborella trichopoda HOM05D004905 ORTHO05D005456 5.6e-36 155.2 194 47.4
Solyc02g086350.3 Solanum lycopersicum HOM05D004905 ORTHO05D005456 5.6e-36 155.2 201 47.3
GSVIVG01030977001 Vitis vinifera HOM05D004905 ORTHO05D005456 5.6e-36 155.2 145 58.6
Sc10g0001050 Simmondsia chinensis HOM05D004905 ORTHO05D005456 7.4e-36 154.8 182 56.6
Nitab4.5_0011439g0010 Nicotiana tabacum HOM05D004905 ORTHO05D005456 9.6e-36 154.5 201 46.8
Cc07_g08530 Coffea canephora HOM05D004905 ORTHO05D005456 1.3e-35 154.1 196 48.0
SGA_v2.0_scaffold202G41468 Striga asiatica HOM05D004905 ORTHO05D005456 3.7e-35 152.5 203 43.8
Lj4P184T26 Lonicera japonica HOM05D004905 ORTHO05D005456 1.1e-34 151.0 206 49.0
arahy.Tifrunner.gnm1.ann1.NNR4KN Arachis hypogaea HOM05D004905 ORTHO05D005456 5.3e-34 148.7 196 48.5
COL.COLO4_09375 Corchorus olitorius HOM05D004905 ORTHO05D005456 1.2e-33 147.5 176 52.3
arahy.Tifrunner.gnm1.ann1.98PLAU Arachis hypogaea HOM05D004905 ORTHO05D005456 2.6e-33 146.4 196 48.0
Gohir.A07G175500 Gossypium hirsutum HOM05D004905 ORTHO05D005456 2.2e-32 143.3 194 49.0
Lalb_Chr04g0257631 Lupinus albus HOM05D004905 ORTHO05D005456 3.8e-32 142.5 227 43.2
Peaxi162Scf00877g00001 Petunia axillaris HOM05D004905 ORTHO05D005456 3.8e-32 142.5 203 44.3
CDE02G1873 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 1.1e-31 141.0 197 45.7
EL10Ac2g04529 Beta vulgaris HOM05D004905 ORTHO05D005456 1.4e-31 140.6 189 45.0
Gorai.001G202800 Gossypium raimondii HOM05D004905 ORTHO05D005456 1.6e-30 137.1 193 47.7
Gohir.D07G181800 Gossypium hirsutum HOM05D004905 ORTHO05D005456 2.7e-30 136.3 193 47.7
Phvul.008G008400 Phaseolus vulgaris HOM05D004905 ORTHO05D005456 1.0e-29 134.4 197 44.2
DCAR_011263 Daucus carota HOM05D004905 ORTHO05D005456 2.3e-29 133.3 193 42.5
Lsat_1_v5_gn_2_80961 Lactuca sativa HOM05D004905 ORTHO05D005456 1.9e-28 130.2 186 46.2
AUR62009040 Chenopodium quinoa HOM05D004905 ORTHO05D005456 3.3e-28 129.4 182 42.9
AUR62023222 Chenopodium quinoa HOM05D004905 ORTHO05D005456 3.3e-28 129.4 182 42.9
Sopen02g031010 Solanum pennellii HOM05D004905 ORTHO05D005456 5.7e-28 128.6 201 41.8
vmacro22954 Vaccinium macrocarpon HOM05D004905 ORTHO05D005456 9.6e-28 127.9 196 44.4
Phvul.004G002200 Phaseolus vulgaris HOM05D004905 ORTHO05D005456 2.1e-27 126.7 183 45.9
PGSC0003DMG400026397 Solanum tuberosum HOM05D004905 ORTHO05D005456 3.7e-27 125.9 201 42.8
HanXRQChr09g0262681 Helianthus annuus HOM05D004905 ORTHO05D005456 1.2e-25 120.9 181 40.9
VMungo0464G1170 Vigna mungo HOM05D004905 ORTHO05D005456 1.5e-25 120.6 183 43.7
Glyma.19G001900 Glycine max HOM05D004905 ORTHO05D005456 8.5e-24 114.8 205 40.0
Oeu041980.1 Olea europaea HOM05D004905 ORTHO05D005456 8.5e-24 114.8 127 52.8
CAN.G625.56 Capsicum annuum HOM05D004905 ORTHO05D005456 1.9e-23 113.6 203 39.9
Lj2C439T5 Lonicera japonica HOM05D004905 ORTHO05D005456 3.2e-23 112.8 194 40.7
unitig_899.g14515 Utricularia gibba HOM05D004905 ORTHO05D005456 4.2e-23 112.5 177 40.7
Aa31LG2G3310 Aethionema arabicum HOM05D004905 ORTHO05D005456 9.3e-23 111.3 192 39.1
AL2G25050 Arabidopsis lyrata HOM05D004905 ORTHO05D005456 3.6e-22 109.4 197 38.1
AUR62023266 Chenopodium quinoa HOM05D004905 ORTHO05D005456 4.6e-22 109.0 161 42.9
MELO3C008158.2 Cucumis melo HOM05D004905 ORTHO05D005456 4.6e-22 109.0 195 40.5
Carub.0005s1253 Capsella rubella HOM05D004905 ORTHO05D005456 1.5e-20 104.0 193 35.8
CsaV3_2G033850 Cucumis sativus L. HOM05D004905 ORTHO05D005456 9.7e-20 101.3 195 39.0
Hund13701 Selenicereus undatus HOM05D004905 ORTHO05D005456 9.7e-20 101.3 153 43.1
THA.LOC104823849 Tarenaya hassleriana HOM05D004905 ORTHO05D005456 2.2e-19 100.1 130 45.4
Aa31LG9G17230 Aethionema arabicum HOM05D004905 ORTHO05D005456 3.7e-19 99.4 189 36.0
AT1G66840 Arabidopsis thaliana HOM05D004905 ORTHO05D005456 8.2e-19 98.2 197 36.5
Ah.10g037620 Amaranthus hybridus HOM05D004905 ORTHO05D005456 2.4e-18 96.7 151 39.7
Sp5g21810 Schrenkiella parvula HOM05D004905 ORTHO05D005456 2.4e-18 96.7 193 36.8
Carub.0002s1304 Capsella rubella HOM05D004905 ORTHO05D005456 3.1e-18 96.3 193 36.8
ClCG11G007710 Citrullus lanatus HOM05D004905 ORTHO05D005456 3.1e-18 96.3 195 37.4
Sp7g03910 Schrenkiella parvula HOM05D004905 ORTHO05D005456 3.1e-18 96.3 193 34.7
BraA04t16780Z Brassica rapa HOM05D004905 ORTHO05D005456 4.1e-18 95.9 183 36.6
BcaB06g27171 Brassica carinata HOM05D004905 ORTHO05D005456 9.1e-18 94.7 189 37.0
A04p11140 Brassica napus HOM05D004905 ORTHO05D005456 1.2e-17 94.4 189 37.0
Haze_04421 Corylus avellana HOM05D004905 ORTHO05D019407 2.0e-17 93.6 82 63.4
ECA238G0899 Erigeron canadensis HOM05D004905 ORTHO05D005456 2.0e-17 93.6 181 35.9
CARHR058960 Cardamine hirsuta HOM05D004905 ORTHO05D005456 3.4e-17 92.8 193 34.2
BcaC02g09630 Brassica carinata HOM05D004905 ORTHO05D005456 5.9e-17 92.0 193 36.3
BolC4t26067H Brassica oleracea HOM05D004905 ORTHO05D005456 5.9e-17 92.0 193 36.3
C04p44880 Brassica napus HOM05D004905 ORTHO05D005456 2.9e-16 89.7 193 36.8
SalBow3G3699 Salvia bowleyana HOM05D004905 ORTHO05D005456 2.9e-16 89.7 131 45.0
AL7G52720 Arabidopsis lyrata HOM05D004905 ORTHO05D005456 3.8e-16 89.4 193 32.1
HanXRQChr11g0325151 Helianthus annuus HOM05D004905 ORTHO05D005456 1.1e-15 87.8 181 35.9
BcaB03g15228 Brassica carinata HOM05D004905 ORTHO05D005456 1.4e-15 87.4 171 35.7
Zm00001eb156080 Zea mays HOM05D004905 ORTHO05D005456 9.4e-15 84.7 185 33.5
AT5G38150 Arabidopsis thaliana HOM05D004905 ORTHO05D005456 2.7e-14 83.2 191 31.4
unitig_37.g12374 Utricularia gibba HOM05D004905 ORTHO05D005456 4.6e-14 82.4 180 32.8
HanXRQChr12g0357381 Helianthus annuus HOM05D004905 ORTHO05D005456 2.3e-13 80.1 181 32.6
BcaC08g46129 Brassica carinata HOM05D004905 ORTHO05D005456 3.0e-13 79.7 187 32.6
Gohir.D11G172100 Gossypium hirsutum HOM05D004905 ORTHO05D005456 8.8e-13 78.2 104 46.2
Gorai.007G184500 Gossypium raimondii HOM05D004905 ORTHO05D005456 8.8e-13 78.2 104 46.2
BolC6t39105H Brassica oleracea HOM05D004905 ORTHO05D005456 1.1e-12 77.8 187 32.6
A07p33640 Brassica napus HOM05D004905 ORTHO05D005456 2.0e-12 77.0 187 31.6
BraA07t30992Z Brassica rapa HOM05D004905 ORTHO05D005456 2.0e-12 77.0 187 31.6
C06p40220 Brassica napus HOM05D000005 ORTHO05D005456 2.6e-12 76.6 187 32.1
MD17G1250200 Malus domestica HOM05D004905 ORTHO05D005456 1.3e-11 74.3 110 39.1
CDE08G0600 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 2.2e-11 73.6 222 32.0
Gohir.A11G165900 Gossypium hirsutum HOM05D004905 ORTHO05D005456 1.8e-10 70.5 89 50.6
Lsat_1_v5_gn_4_155561 Lactuca sativa HOM05D004905 ORTHO05D005456 3.4e-09 66.2 68 50.0
SEGI_16968 Sequoiadendron giganteum HOM05D001827 ORTHO05D001790 2.2e-08 63.5 196 29.1
Os01g0692300 Oryza sativa ssp. japonica HOM05D004905 ORTHO05D005456 3.2e-07 59.7 193 29.5
Thhalv10018290m.g Eutrema salsugineum HOM05D004905 ORTHO05D005456 5.5e-07 58.9 137 35.0
RcHm_v2.0_Chr5g0000421 Rosa chinensis HOM05D001827 ORTHO05D001790 1.6e-06 57.4 170 28.8
Glyma.05G002000 Glycine max HOM05D004905 ORTHO05D005456 7.9e-06 55.1 198 28.3


User provided reference genes

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