Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00799 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 1.5e-116 422.9 221 100.0
Aqoxy4G00731 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 2.6e-65 252.7 243 64.6
TAR627G0112 Trochodendron aralioides HOM05D005116 ORTHO05D005937 3.6e-38 162.5 233 43.8
TWI59G1245 Tripterygium wilfordii HOM05D005116 ORTHO05D005937 6.8e-37 158.3 200 52.5
TAR629G1139 Trochodendron aralioides HOM05D005116 ORTHO05D005937 9.8e-36 154.5 233 42.5
GSVIVG01020569001 Vitis vinifera HOM05D005116 ORTHO05D005937 2.2e-35 153.3 247 44.5
COL.COLO4_05946 Corchorus olitorius HOM05D005116 ORTHO05D005937 4.9e-35 152.1 215 45.6
Manes.13G144900 Manihot esculenta HOM05D005116 ORTHO05D005937 4.9e-35 152.1 208 48.1
Dinv13395 Davidia involucrata HOM05D005116 ORTHO05D005937 8.3e-35 151.4 143 60.1
Sopen07g027830 Solanum pennellii HOM05D005116 ORTHO05D005937 8.3e-35 151.4 143 60.1
Actinidia11017 Actinidia chinensis HOM05D005116 ORTHO05D005937 3.2e-34 149.4 192 49.0
Solyc07g053860.3 Solanum lycopersicum HOM05D005116 ORTHO05D005937 4.1e-34 149.1 143 59.4
Ciclev10015278m.g Citrus clementina HOM05D005116 ORTHO05D005937 5.4e-34 148.7 140 59.3
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 5.4e-34 148.7 246 40.7
CsaV3_6G012810 Cucumis sativus L. HOM05D005116 ORTHO05D005937 1.2e-33 147.5 145 57.9
PSO832G2322 Papaver somniferum HOM05D005116 ORTHO05D005937 1.6e-33 147.1 140 61.4
Ciclev10015471m.g Citrus clementina HOM05D005116 ORTHO05D005937 4.6e-33 145.6 140 57.1
Atru.chr6.2899 Acer truncatum HOM05D005116 ORTHO05D005937 7.8e-33 144.8 212 43.4
Phvul.011G115315 Phaseolus vulgaris HOM05D005116 ORTHO05D005937 1.3e-32 144.1 228 45.2
CSS0036411 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 1.7e-32 143.7 208 46.6
CSS0044850 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 3.0e-32 142.9 208 46.6
EL10Ac5g11143 Beta vulgaris HOM05D005116 ORTHO05D005937 3.9e-32 142.5 136 55.9
CAN.G209.35 Capsicum annuum HOM05D005116 ORTHO05D005937 5.0e-32 142.1 135 56.3
Duzib052G0489 Durio zibethinus HOM05D005116 ORTHO05D005937 8.6e-32 141.4 146 55.5
Gohir.A01G018800 Gossypium hirsutum HOM05D005116 ORTHO05D005937 8.6e-32 141.4 215 42.3
Sed0010367 Sechium edule HOM05D005116 ORTHO05D005937 1.9e-31 140.2 142 54.9
AUR62025873 Chenopodium quinoa HOM05D005116 ORTHO05D005937 2.5e-31 139.8 124 61.3
PSO210G2339 Papaver somniferum HOM05D005116 ORTHO05D005937 2.5e-31 139.8 140 59.3
ATR0763G277 Amborella trichopoda HOM05D005116 ORTHO05D005937 4.3e-31 139.0 140 56.4
Glyma.12G116000 Glycine max HOM05D005116 ORTHO05D005937 4.3e-31 139.0 227 41.4
Hund01029 Selenicereus undatus HOM05D005116 ORTHO05D005937 4.3e-31 139.0 196 45.9
Thecc.06G001400 Theobroma cacao HOM05D005116 ORTHO05D005937 4.3e-31 139.0 220 41.8
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea HOM05D005116 ORTHO05D005937 5.6e-31 138.7 245 41.6
Duzib248G1083 Durio zibethinus HOM05D005116 ORTHO05D005937 5.6e-31 138.7 214 41.6
Gorai.002G019600 Gossypium raimondii HOM05D005116 ORTHO05D005937 5.6e-31 138.7 214 41.6
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea HOM05D005116 ORTHO05D005937 7.3e-31 138.3 245 42.0
VMungo1127G1891 Vigna mungo HOM05D005116 ORTHO05D005937 7.3e-31 138.3 234 41.0
QL08p039613 Quercus lobata HOM05D005116 ORTHO05D005937 1.2e-30 137.5 141 56.7
MD09G1244900 Malus domestica HOM05D005116 ORTHO05D005937 1.6e-30 137.1 140 57.1
Potri.017G012500 Populus trichocarpa HOM05D005116 ORTHO05D005937 1.6e-30 137.1 140 57.1
Gohir.D01G017400 Gossypium hirsutum HOM05D005116 ORTHO05D005937 4.7e-30 135.6 214 40.7
Nitab4.5_0006721g0020 Nicotiana tabacum HOM05D005116 ORTHO05D005937 4.7e-30 135.6 189 46.6
PGR042G3305 Punica granatum HOM05D005116 ORTHO05D005937 4.7e-30 135.6 220 42.3
MELO3C013631.2 Cucumis melo HOM05D005116 ORTHO05D005937 6.2e-30 135.2 135 55.6
CANSAT64G0665 Cannabis sativa HOM05D005116 ORTHO05D005937 8.0e-30 134.8 248 38.7
Lalb_Chr03g0029531 Lupinus albus HOM05D005116 ORTHO05D005937 8.0e-30 134.8 137 54.0
Sabra17G0010300 Salix brachista HOM05D005116 ORTHO05D005937 1.0e-29 134.4 184 47.8
ECA234G2480 Erigeron canadensis HOM05D005116 ORTHO05D005937 4.0e-29 132.5 241 37.3
CiPaw.03G178700 Carya illinoinensis HOM05D005116 ORTHO05D005937 5.2e-29 132.1 140 56.4
Migut.M00082 Erythranthe guttata HOM05D005116 ORTHO05D005937 5.2e-29 132.1 140 52.9
FvH4_5g30750 Fragaria vesca HOM05D005116 ORTHO05D005937 5.2e-29 132.1 210 42.4
Prupe.4G278300 Prunus persica HOM05D005116 ORTHO05D005937 5.2e-29 132.1 140 54.3
RcHm_v2.0_Chr7g0225641 Rosa chinensis HOM05D005116 ORTHO05D005937 5.2e-29 132.1 211 42.2
FAN13G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 6.8e-29 131.7 248 37.9
HanXRQChr15g0470251 Helianthus annuus HOM05D005116 ORTHO05D005937 6.8e-29 131.7 230 39.1
Nitab4.5_0004959g0030 Nicotiana tabacum HOM05D005116 ORTHO05D005937 6.8e-29 131.7 129 58.9
Eucgr.A01831 Eucalyptus grandis HOM05D005116 ORTHO05D005937 8.9e-29 131.3 253 38.7
FAN18G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 8.9e-29 131.3 248 37.9
HanXRQChr16g0525341 Helianthus annuus HOM05D005116 ORTHO05D005937 8.9e-29 131.3 236 40.7
Rhsim06G0139500 Rhododendron simsii HOM05D005116 ORTHO05D005937 8.9e-29 131.3 215 42.3
RhsimUnG0145200 Rhododendron simsii HOM05D005116 ORTHO05D005937 8.9e-29 131.3 215 42.3
Ah.09g227990 Amaranthus hybridus HOM05D005116 ORTHO05D005937 1.2e-28 131.0 143 49.7
Cpa.g.sc83.62 Carica papaya HOM05D005116 ORTHO05D005937 1.5e-28 130.6 143 49.7
Haze_13200 Corylus avellana HOM05D005116 ORTHO05D005937 1.5e-28 130.6 141 54.6
Lj3g0009567 Lotus japonicus HOM05D005116 ORTHO05D005937 1.5e-28 130.6 204 43.1
Cc00_g12320 Coffea canephora HOM05D005116 ORTHO05D005937 2.0e-28 130.2 137 53.3
AUR62029845 Chenopodium quinoa HOM05D005116 ORTHO05D005937 7.5e-28 128.3 228 38.6
RcHm_v2.0_Chr4g0410421 Rosa chinensis HOM05D005116 ORTHO05D005937 7.5e-28 128.3 212 41.0
ClCG02G017750 Citrullus lanatus HOM05D005116 ORTHO05D005937 1.7e-27 127.1 134 54.5
HPP92_007017 Vanilla planifolia HOM05D005116 ORTHO05D005937 1.7e-27 127.1 219 40.2
SalBow7G1661 Salvia bowleyana HOM05D002934 ORTHO05D003937 2.2e-27 126.7 140 49.3
Sc09g0004750 Simmondsia chinensis HOM05D005116 ORTHO05D005937 2.2e-27 126.7 136 50.7
Sc09g0006700 Simmondsia chinensis HOM05D005116 ORTHO05D005937 2.2e-27 126.7 233 39.1
Ca_18939_v3 Cicer arietinum L. HOM05D005116 ORTHO05D005937 2.9e-27 126.3 134 51.5
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 2.9e-27 126.3 147 49.0
vmacro15911 Vaccinium macrocarpon HOM05D005116 ORTHO05D005937 2.9e-27 126.3 144 49.3
MBI07_g40350_MAGBIO Magnolia biondii HOM05D005116 ORTHO05D005937 4.9e-27 125.6 166 44.6
THA.LOC104801168 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 8.3e-27 124.8 134 51.5
Peaxi162Scf01415g00032 Petunia axillaris HOM05D005116 ORTHO05D005937 1.1e-26 124.4 119 59.7
unitig_748.g8536 Utricularia gibba HOM05D005116 ORTHO05D005937 9.2e-26 121.3 241 39.0
PSO478G3970 Papaver somniferum HOM05D005116 ORTHO05D005937 2.7e-25 119.8 141 50.4
Actinidia11090 Actinidia chinensis HOM05D005116 ORTHO05D005937 3.9e-24 115.9 212 39.2
SEGI_12795 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 5.0e-24 115.5 136 45.6
SEGI_15947 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 5.0e-24 115.5 136 45.6
BraA10t42497Z Brassica rapa HOM05D005116 ORTHO05D005937 3.3e-23 112.8 131 48.1
Sp1g02620 Schrenkiella parvula HOM05D005116 ORTHO05D005937 4.3e-23 112.5 140 46.4
BcaC05g24513 Brassica carinata HOM05D005116 ORTHO05D005937 1.2e-22 110.9 131 47.3
BolC5t28987H Brassica oleracea HOM05D005116 ORTHO05D005937 1.2e-22 110.9 131 47.3
CDE02G0148 Ceratophyllum demersum HOM05D005116 ORTHO05D005937 1.2e-22 110.9 134 47.0
AUR62034810 Chenopodium quinoa HOM05D005116 ORTHO05D005937 1.6e-22 110.5 126 51.6
Aa31LG1G8970 Aethionema arabicum HOM05D005116 ORTHO05D005937 3.6e-22 109.4 140 47.1
Carub.0001s0286 Capsella rubella HOM05D005116 ORTHO05D005937 3.6e-22 109.4 140 46.4
BcaNung07372 Brassica carinata HOM05D005116 ORTHO05D005937 4.7e-22 109.0 136 44.9
CARHR003090 Cardamine hirsuta HOM05D005116 ORTHO05D005937 6.2e-22 108.6 134 46.3
Thhalv10007808m.g Eutrema salsugineum HOM05D005116 ORTHO05D005937 1.8e-21 107.1 140 46.4
THA.LOC104826035 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 8.9e-21 104.8 140 47.1
TPR.G29254 Trifolium pratense HOM05D005116 ORTHO05D005937 1.2e-20 104.4 136 43.4
Psat7g169080 Pisum sativum HOM05D005116 ORTHO05D005937 3.4e-20 102.8 115 51.3
C05p02100 Brassica napus HOM05D005116 ORTHO05D005937 7.5e-20 101.7 127 48.8
AT1G03760 Arabidopsis thaliana HOM05D005116 ORTHO05D005937 6.4e-19 98.6 190 37.4
Nitab4.5_0000638g0150 Nicotiana tabacum HOM05D005116 ORTHO05D005937 8.3e-19 98.2 101 50.5
Medtr4g078505 Medicago truncatula HOM05D005116 ORTHO05D005937 7.1e-18 95.1 120 48.3
AL1G13310 Arabidopsis lyrata HOM05D005116 ORTHO05D005937 1.6e-17 94.0 118 44.9
C04p67500 Brassica napus HOM05D005116 ORTHO05D005937 1.7e-16 90.5 111 43.2
BcaC02g07427 Brassica carinata HOM05D005116 ORTHO05D005937 5.1e-16 89.0 111 41.4
SMO115G0247 Selaginella moellendorffii HOM05D005116 ORTHO05D005937 5.1e-16 89.0 140 40.7
Oeu035627.2 Olea europaea HOM05D005116 ORTHO05D005937 1.9e-15 87.0 94 50.0
Lj8A109T77 Lonicera japonica HOM05D005116 ORTHO05D005937 4.3e-15 85.9 159 41.5
BolC4t28247H Brassica oleracea HOM05D005116 ORTHO05D005937 9.5e-15 84.7 101 43.6
Lsat_1_v5_gn_4_29780 Lactuca sativa HOM05D005116 ORTHO05D005937 8.1e-14 81.6 115 46.1
Pp3c13_17680 Physcomitrium patens HOM05D005116 ORTHO05D005937 1.8e-13 80.5 146 34.9
Zm00001eb142460 Zea mays HOM05D005116 ORTHO05D005937 1.8e-13 80.5 122 45.1
Mapoly0076s0049 Marchantia polymorpha HOM05D005116 ORTHO05D005937 7.6e-12 75.1 137 33.6
C03p22830 Brassica napus HOM05D000229 ORTHO05D005937 2.9e-11 73.2 80 43.8
AagrBONN_evm.TU.Sc2ySwM_344.4439 Anthoceros agrestis HOM05D005116 ORTHO05D005937 8.4e-11 71.6 138 36.2
Lj8C109T10 Lonicera japonica HOM05D005116 ORTHO05D005937 8.4e-11 71.6 66 50.0
CBR_g73964 Chara braunii HOM05D005116 ORTHO05D005937 2.4e-10 70.1 124 33.9
A10p02290 Brassica napus HOM05D005116 ORTHO05D005937 2.1e-09 67.0 57 63.2
Nitab4.5_0001752g0050 Nicotiana tabacum HOM05D005116 ORTHO05D005937 4.6e-09 65.9 57 59.6
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis HOM05D005116 ORTHO05D005937 3.9e-08 62.8 127 33.9
arahy.Tifrunner.gnm1.ann1.13T34P Arachis hypogaea HOM05D000168 ORTHO05D000811 6.6e-08 62.0 62 51.6
Os01g0928300 Oryza sativa ssp. japonica HOM05D005116 ORTHO05D005937 8.6e-08 61.6 67 46.3
BcaC03g18340 Brassica carinata HOM05D005116 ORTHO05D005937 1.1e-07 61.2 65 43.1
C04p61610 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-07 58.9 63 42.9
BolC2t12481H Brassica oleracea HOM05D005116 ORTHO05D005937 7.3e-07 58.5 63 41.3
BcaC01g05723 Brassica carinata HOM05D005116 ORTHO05D005937 1.2e-06 57.8 63 41.3
Gorai.005G200500 Gossypium raimondii HOM05D005116 ORTHO05D005937 1.2e-06 57.8 110 36.4
arahy.Tifrunner.gnm1.ann1.FT3874 Arachis hypogaea HOM05D000168 ORTHO05D000811 2.1e-06 57.0 39 69.2
Glyma.12G137500 Glycine max HOM05D005116 ORTHO05D005937 3.6e-06 56.2 32 84.4


User provided reference genes

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